| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200376
Identifier: 87200376
GI number: 87200376
Start: 2512520
End: 2513065
Strand: Direct
Name: 87200376
Synonym: Saro_2363
Alternate gene names: NA
Gene position: 2512520-2513065 (Clockwise)
Preceding gene: 87200375
Following gene: 87200382
Centisome position: 70.55
GC content: 63.0
Gene sequence:
>546_bases GTGAAGACGCTCGCCCTGTTCCGCCACGCCAAATCGGACTGGAGCGATGCGCGTGCACGGGACTTCGACCGTCCGCTGAA CGAGCGCGGGCAACGGGGCGCGCGCGCAATGGGCGCCTACATCAAGTCGACCGGACGCAGTTTCGACAGGATGATTGCCT CGCCCGCGGTACGGGCCGCGGAGACCGTGGAGGAAGCGAGCAAGGCCTGGGGCTGCACGTTCAAGGTCGAGTGGGACCGG CGGATCTATCTGGCAAGTTCGGCAACGCTGGTCGACTTGCTCAAGGAAATCAGCGGCGATCCTGCAAGCGTGCTCATGGT CGGGCATAACCCGGGTCTGGAGGACCTGATCTTCGACCTAGTGCCCGACGATGGCAGCAGCCCATTGCGCGACGTAGTCG AACAGAAGTTCCCTACCGCAACATTCGCGGTACTTGAACTGGACATTGACCGGTGGTCCGACGTCGCGGATCGCTGCGGA CGACTGGTCGAACTGAAACGTCCACGCGACCTCGACCCCACGTTGGGACCGGTGCTGGTAGATTAA
Upstream 100 bases:
>100_bases CGCCGATCAGAAGGGTGACGCTGGATGCCGCTTTACAAAGCATCGTGGCCGGTGTTTCTGGTTCAACTGCACCGGCAACA ACGCCGACCGAGGGAATTTC
Downstream 100 bases:
>100_bases CCCGCGTCGTCCTCGATTGCGACCGCGAGACGTTCCCGGATGCCGCCCAGTTCAGCTGCCAACGATGCGAAGTCGGTTGC CGCCAATGATTGGACAAGCC
Product: putative phosphohistidine phosphatase SixA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 181
Protein sequence:
>181_residues MKTLALFRHAKSDWSDARARDFDRPLNERGQRGARAMGAYIKSTGRSFDRMIASPAVRAAETVEEASKAWGCTFKVEWDR RIYLASSATLVDLLKEISGDPASVLMVGHNPGLEDLIFDLVPDDGSSPLRDVVEQKFPTATFAVLELDIDRWSDVADRCG RLVELKRPRDLDPTLGPVLVD
Sequences:
>Translated_181_residues MKTLALFRHAKSDWSDARARDFDRPLNERGQRGARAMGAYIKSTGRSFDRMIASPAVRAAETVEEASKAWGCTFKVEWDR RIYLASSATLVDLLKEISGDPASVLMVGHNPGLEDLIFDLVPDDGSSPLRDVVEQKFPTATFAVLELDIDRWSDVADRCG RLVELKRPRDLDPTLGPVLVD >Mature_181_residues MKTLALFRHAKSDWSDARARDFDRPLNERGQRGARAMGAYIKSTGRSFDRMIASPAVRAAETVEEASKAWGCTFKVEWDR RIYLASSATLVDLLKEISGDPASVLMVGHNPGLEDLIFDLVPDDGSSPLRDVVEQKFPTATFAVLELDIDRWSDVADRCG RLVELKRPRDLDPTLGPVLVD
Specific function: Unknown
COG id: COG2062
COG function: function code T; Phosphohistidine phosphatase SixA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sixA phosphatase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013078 [H]
Pfam domain/function: PF00300 PGAM [H]
EC number: NA
Molecular weight: Translated: 20146; Mature: 20146
Theoretical pI: Translated: 5.11; Mature: 5.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTLALFRHAKSDWSDARARDFDRPLNERGQRGARAMGAYIKSTGRSFDRMIASPAVRAA CCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH ETVEEASKAWGCTFKVEWDRRIYLASSATLVDLLKEISGDPASVLMVGHNPGLEDLIFDL HHHHHHHHHCCCEEEEECCCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH VPDDGSSPLRDVVEQKFPTATFAVLELDIDRWSDVADRCGRLVELKRPRDLDPTLGPVLV CCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEC D C >Mature Secondary Structure MKTLALFRHAKSDWSDARARDFDRPLNERGQRGARAMGAYIKSTGRSFDRMIASPAVRAA CCHHHHHHHHCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH ETVEEASKAWGCTFKVEWDRRIYLASSATLVDLLKEISGDPASVLMVGHNPGLEDLIFDL HHHHHHHHHCCCEEEEECCCEEEEECCHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHH VPDDGSSPLRDVVEQKFPTATFAVLELDIDRWSDVADRCGRLVELKRPRDLDPTLGPVLV CCCCCCCHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHEECCCCCCCCCCCCCEEC D C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]