| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87200284
Identifier: 87200284
GI number: 87200284
Start: 2410112
End: 2410615
Strand: Reverse
Name: 87200284
Synonym: Saro_2270
Alternate gene names: NA
Gene position: 2410615-2410112 (Counterclockwise)
Preceding gene: 87200285
Following gene: 87200280
Centisome position: 67.68
GC content: 66.67
Gene sequence:
>504_bases ATGCTGCCGTTCGGCAGCGTCAACGTCCCCGGTCAGCCTGGCTACTCGCCCGATCTGCAGCGCCATCATATCCTGCCTCG ACAGGTCCTCGGTTCAAGGGCTCTGGGCGGGCTGGTCGCGAGACTGGGCGTGGATCGGCTGGGTTTCCACGACTTCCGTC GCAACGGCCTGCTACTCCCCGCGTGCGAACAAGCTGCCCTGCGCATCGGCCTGCCGCTCCACCGCGGCCCGCATCGCAGC TACAACGAACTCGTCCTCGAACGCGCCGGCCAGATCGAGGCGCACTGGGCGCAGCAGCGGGCGGCCGGTTCTACCGATGC GGACTTCGTGGCGCTGATGCGGTTTGACCTGCTGCAGCGCGCGCTGCGGCGGCGGCTGCTTGATCCGCGGTCGTGGACGG GAAAGCCGTTGAACGCGCGCGATCCGGCGCTGGATTTCAGCCATCTCGATGAAATGGCGGACCTTTTATGGTCCGCCACC GGCTGGAACGCGAAAGTCGCTTAA
Upstream 100 bases:
>100_bases TTCTTGCCGGAACGGGAGCAGTCCTTCTTGAGGCGCCCGAATGGGATCGTATCGTTGCGAGGTGCTGCTGAACCGGAAAG ACGTTGGGGAAAACCGCAGG
Downstream 100 bases:
>100_bases CGACACCTAAAAGCACCTAACGGCACCTAGACGTACCTGGTCTCCTTCAGGAAGGGTGCGGAGTTTGCCGAAAGCGCCTC TGCGGCCTGGCGATACTGCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 167; Mature: 167
Protein sequence:
>167_residues MLPFGSVNVPGQPGYSPDLQRHHILPRQVLGSRALGGLVARLGVDRLGFHDFRRNGLLLPACEQAALRIGLPLHRGPHRS YNELVLERAGQIEAHWAQQRAAGSTDADFVALMRFDLLQRALRRRLLDPRSWTGKPLNARDPALDFSHLDEMADLLWSAT GWNAKVA
Sequences:
>Translated_167_residues MLPFGSVNVPGQPGYSPDLQRHHILPRQVLGSRALGGLVARLGVDRLGFHDFRRNGLLLPACEQAALRIGLPLHRGPHRS YNELVLERAGQIEAHWAQQRAAGSTDADFVALMRFDLLQRALRRRLLDPRSWTGKPLNARDPALDFSHLDEMADLLWSAT GWNAKVA >Mature_167_residues MLPFGSVNVPGQPGYSPDLQRHHILPRQVLGSRALGGLVARLGVDRLGFHDFRRNGLLLPACEQAALRIGLPLHRGPHRS YNELVLERAGQIEAHWAQQRAAGSTDADFVALMRFDLLQRALRRRLLDPRSWTGKPLNARDPALDFSHLDEMADLLWSAT GWNAKVA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18623; Mature: 18623
Theoretical pI: Translated: 10.79; Mature: 10.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLPFGSVNVPGQPGYSPDLQRHHILPRQVLGSRALGGLVARLGVDRLGFHDFRRNGLLLP CCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ACEQAALRIGLPLHRGPHRSYNELVLERAGQIEAHWAQQRAAGSTDADFVALMRFDLLQR HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ALRRRLLDPRSWTGKPLNARDPALDFSHLDEMADLLWSATGWNAKVA HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure MLPFGSVNVPGQPGYSPDLQRHHILPRQVLGSRALGGLVARLGVDRLGFHDFRRNGLLLP CCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ACEQAALRIGLPLHRGPHRSYNELVLERAGQIEAHWAQQRAAGSTDADFVALMRFDLLQR HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHH ALRRRLLDPRSWTGKPLNARDPALDFSHLDEMADLLWSATGWNAKVA HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA