Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200282

Identifier: 87200282

GI number: 87200282

Start: 2407965

End: 2409011

Strand: Direct

Name: 87200282

Synonym: Saro_2268

Alternate gene names: NA

Gene position: 2407965-2409011 (Clockwise)

Preceding gene: 87200281

Following gene: 87200283

Centisome position: 67.61

GC content: 66.57

Gene sequence:

>1047_bases
ATGGCCGAAGAAGCGATTCTCGAACCCGATCTGCCGATCATCGACCCGCACCACCACCTGTGGGACCTGCGCCCGCTGAT
CGCCTCGTTTCCCGAGCCGCGCCATCCCTTCATCGAGACGCTGACCCACTCGGCCTACTACACCTTCGACCAATTGCTCG
CCGACGCGCGCGGCGGGCACAACGTGGTGGCGACGGTCTACATGGAATGCGGCGCATTCTACCGCGCCGGCGCGGAAGCG
GCCATGAAGCCGGTCGGCGAAGTCGAATTCGTGAACGGCGTTGCGGCCCAGGGCGCGAGCGGCCTCTACGGCGATTTCCG
CCCCTGTGCCGCCATCATCGGCCATGCCGACCTGCAACTGGGCGACGGCGCGCGCCCGGTCCTCGAAGCCCTGTCAGAGG
TGGGCAATGGCCGCTTCCGGGGAATCCGCCACCAGGGCGCTTGGGACGCCAATCCGGATGTCCTCGGCCCGCCTTTCCAC
GCCCCGCCCCGGCTCTACCTGTCGGATGAATTTCGCAAGGGCTTCAGGCATCTGGGCGAACTGGGCCTCACCTTCGATGC
CTGGCTGCTCGAACCGCAATTGTCCGACGTGCTCGATCTCGCCCGCGCATTTCCCGACCAGCCGATCTGCCTCGACCATT
GCGGCACGCCACTCGGCACGTCCAGCTATCACGGCAAGCTGCACGAACGCTTCGAAGGGTGGCGCACCTCGATCCGCGCG
ATCGCGCAGTGCCCCAACGTGACGGTCAAGCTTGGCGGCCTCGCCATGGCGTTCTGCGGCCTGCCCGAAGAGGGACCGAT
GGCTGGCCTTTCGTCCGAAACGCTCGCCGCGATGTGGCGCCCCTACATCGAGACCTGCATCGAGGCCTTCGGGCCCGAGC
GCGCGATGTTCGAAAGCAATTATCCGGTCGACAAGTGGGGCGCGAGCTACAACGTGCTGTGGAACGCCTTCAAGCGCCTT
GCACATGGCGCATCCGATGCCGAAAAGCGCGCCCTCTTCGCGGGCACCGCGGCGCGGTTCTACGGGCTGGAGGACCTGCT
GGCCTGA

Upstream 100 bases:

>100_bases
GGCCGCCCGTTCAATCAAGCGATTAGAACCTGCTTGATACGGTCGCGTCATGCGCCATAGTCCCCCCACGCCCGCAAGAG
GCGCGCAATGGGACAGGACA

Downstream 100 bases:

>100_bases
CCAGCTTTGACAAGCTGCCCGGCATGATCTAGCCATTTTAACCATTCGATTAAACACACCTTCAAGGACCCGAGCCGAAT
GCCCCTGCCCCCGCTATTCG

Product: amidohydrolase 2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 347

Protein sequence:

>348_residues
MAEEAILEPDLPIIDPHHHLWDLRPLIASFPEPRHPFIETLTHSAYYTFDQLLADARGGHNVVATVYMECGAFYRAGAEA
AMKPVGEVEFVNGVAAQGASGLYGDFRPCAAIIGHADLQLGDGARPVLEALSEVGNGRFRGIRHQGAWDANPDVLGPPFH
APPRLYLSDEFRKGFRHLGELGLTFDAWLLEPQLSDVLDLARAFPDQPICLDHCGTPLGTSSYHGKLHERFEGWRTSIRA
IAQCPNVTVKLGGLAMAFCGLPEEGPMAGLSSETLAAMWRPYIETCIEAFGPERAMFESNYPVDKWGASYNVLWNAFKRL
AHGASDAEKRALFAGTAARFYGLEDLLA

Sequences:

>Translated_348_residues
MAEEAILEPDLPIIDPHHHLWDLRPLIASFPEPRHPFIETLTHSAYYTFDQLLADARGGHNVVATVYMECGAFYRAGAEA
AMKPVGEVEFVNGVAAQGASGLYGDFRPCAAIIGHADLQLGDGARPVLEALSEVGNGRFRGIRHQGAWDANPDVLGPPFH
APPRLYLSDEFRKGFRHLGELGLTFDAWLLEPQLSDVLDLARAFPDQPICLDHCGTPLGTSSYHGKLHERFEGWRTSIRA
IAQCPNVTVKLGGLAMAFCGLPEEGPMAGLSSETLAAMWRPYIETCIEAFGPERAMFESNYPVDKWGASYNVLWNAFKRL
AHGASDAEKRALFAGTAARFYGLEDLLA
>Mature_347_residues
AEEAILEPDLPIIDPHHHLWDLRPLIASFPEPRHPFIETLTHSAYYTFDQLLADARGGHNVVATVYMECGAFYRAGAEAA
MKPVGEVEFVNGVAAQGASGLYGDFRPCAAIIGHADLQLGDGARPVLEALSEVGNGRFRGIRHQGAWDANPDVLGPPFHA
PPRLYLSDEFRKGFRHLGELGLTFDAWLLEPQLSDVLDLARAFPDQPICLDHCGTPLGTSSYHGKLHERFEGWRTSIRAI
AQCPNVTVKLGGLAMAFCGLPEEGPMAGLSSETLAAMWRPYIETCIEAFGPERAMFESNYPVDKWGASYNVLWNAFKRLA
HGASDAEKRALFAGTAARFYGLEDLLA

Specific function: Unknown

COG id: COG3618

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006992 [H]

Pfam domain/function: PF04909 Amidohydro_2 [H]

EC number: NA

Molecular weight: Translated: 38132; Mature: 38000

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEEAILEPDLPIIDPHHHLWDLRPLIASFPEPRHPFIETLTHSAYYTFDQLLADARGGH
CCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
NVVATVYMECGAFYRAGAEAAMKPVGEVEFVNGVAAQGASGLYGDFRPCAAIIGHADLQL
CHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
GDGARPVLEALSEVGNGRFRGIRHQGAWDANPDVLGPPFHAPPRLYLSDEFRKGFRHLGE
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHH
LGLTFDAWLLEPQLSDVLDLARAFPDQPICLDHCGTPLGTSSYHGKLHERFEGWRTSIRA
HCCCHHHHCCCHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IAQCPNVTVKLGGLAMAFCGLPEEGPMAGLSSETLAAMWRPYIETCIEAFGPERAMFESN
HHHCCCCEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
YPVDKWGASYNVLWNAFKRLAHGASDAEKRALFAGTAARFYGLEDLLA
CCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHC
>Mature Secondary Structure 
AEEAILEPDLPIIDPHHHLWDLRPLIASFPEPRHPFIETLTHSAYYTFDQLLADARGGH
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
NVVATVYMECGAFYRAGAEAAMKPVGEVEFVNGVAAQGASGLYGDFRPCAAIIGHADLQL
CHHHHHHHHHHHHHHCCHHHHHCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCCCC
GDGARPVLEALSEVGNGRFRGIRHQGAWDANPDVLGPPFHAPPRLYLSDEFRKGFRHLGE
CCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCEECHHHHHHHHHHHH
LGLTFDAWLLEPQLSDVLDLARAFPDQPICLDHCGTPLGTSSYHGKLHERFEGWRTSIRA
HCCCHHHHCCCHHHHHHHHHHHHCCCCCEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHH
IAQCPNVTVKLGGLAMAFCGLPEEGPMAGLSSETLAAMWRPYIETCIEAFGPERAMFESN
HHHCCCCEEEECHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHCCC
YPVDKWGASYNVLWNAFKRLAHGASDAEKRALFAGTAARFYGLEDLLA
CCHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]