| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is ilvI [H]
Identifier: 87200275
GI number: 87200275
Start: 2400108
End: 2401856
Strand: Direct
Name: ilvI [H]
Synonym: Saro_2261
Alternate gene names: 87200275
Gene position: 2400108-2401856 (Clockwise)
Preceding gene: 87200274
Following gene: 87200276
Centisome position: 67.39
GC content: 65.81
Gene sequence:
>1749_bases GTGACAACCGAGCGCAGCGGCGCCGAGATCCTGGTCGAAAGCCTCGTCGCAAAGGGGGTCGAGTTCGTGTTCGGCTATCC GGGCGGCGCGGTGCTCCCGATCTACGATGCGCTGTTCGGCGATGAACGCCTCCGCCACATCCTAGTCCGCCACGAAGCCG GCGCTGCCCACGCCGCCGAAGGCTACGCGCGCGCCACCGGCAAGCCCGGCGTCGTGCTCGTCACCTCGGGCCCGGGCGCG ACCAACGCCGTCACCGGCATTGCCGATGCGTTCATGGATTCGATTCCGATGGTCGTCATCACCGGCCAGGTCCCCACGGC CCTGATCGGTTCGGATGCGTTCCAGGAAGCCGACACGATCGGCATCACGCGCCACTGCACGAAGCACAACTACCTCGTGA AGGACCCGTCGCAGCTGGCGGCGACCATCGACGAAGCGTTCCGCATCGCCACCGAGGGCCGCCCCGGCCCGGTCGTGATC GACATCCCCAAGGATGTGCAGATCGCGACGGCCGCGTGGAGCAGCGCCGCCCCGCAGCAGCGCAACCGCTATGCTCCCCA GACCGAGGGCGGCGCGAAGGAGATTGCCGAAGCGATCGAACTGATCGCCAAGGCCAAGGCGCCGGTCTTCTACACGGGCG GCGGCGTGATCAATGCCGGCCCGGAAGCGGCCCGCCTGCTGCGCGAACTCCAGTCGCTGACCGGCGCGCCCGTGACCTCC ACGCTGATGGGCCTTGGCGCGTTTCCGGCGGACCACCCGGCATGGCTCGGCATGCTCGGCATGCACGGCACCTACGAAGC CAACATGACGATGAACCGCGCCGACCTCGTCGTCTGCATCGGCGCCCGCTTCGACGACCGCGTCACCGGCCGGCTCGATG CCTTCTCGCCCAACAGCAAGAAGATCCACATCGACATCGACCGGGCCTCGATCAACAAGACCGTCCAGGTCGACCTTCCG GTCATCGGCGATTGCGGCAAGGTCCTTGCCCAGCTCATCGAAGCATGGCTCGAGCGCGGCTACCAGAAGCAGGACCTGAC TGAATGGAACGCCCGCATCGATGGCTGGCGTGCCCGGCAGAGCCTCGCCTTCCCGCGTCGCGGCAAGGAAATCATGCCCC AGCTGGCGATCGAACGTCTCTATGAGCTGACCAGGCACAAGGAGCCGATCATCAGCACCGAAGTCGGCCAGCACCAGATG TGGGCTGCCCAGCACTTCCACTTCATGAAGCCGAACAAGTGGCTGACCTCGGGCGGCCTCGGCACGATGGGCTATGGCCT TCCCGCCGCGATCGGTGCACAGGCCGGCTTCCCCGATGCGCTGGTCATCGACATCGCGGGCGATGCTTCGATCCAGATGA ACATCCAGGAACTCGGCACGGCCACCCAGTACCGCCTTCCGGTCAAGGTCTTCGTGCTGAACAACGAATGGATGGGCATG GTCCGCCAGTGGCAGGAACTCACCTACGAGAGCCGCTACTCGAACTCCTACTCGGACAGCCTGCCCGATTTCGTGAAGCT CGCCGAAGCCTACGGCTGGAAGGGCATCCGCATCACCGACGAAAGCGAGCTGGACGCCGGCATCCAGGCGATGATCGATC ATGACGGCCCGGTCTTCGTCGACTGCCTCGTCGCCAAGGAAGCGAATTGCTTCCCGATGATCCCGTCGGGGGCTGCGCAC ACCGACATGATCCTCTACGGGGACGAAGTCGCCGGCACGATGGACGACGAAGCCAAGGCGCTGGTCTGA
Upstream 100 bases:
>100_bases GACGGCTCGGCGCAGCATGCCTGCGCCGAGCCGAAATTTTTTGTTTTTTGCAGGTGCGGTCGGGGCTATCGGGCCACGAC GCGAAGAAGGATGAAGTAAC
Downstream 100 bases:
>100_bases AGGACACCGGAACAATGATGCACATCGCTCAGGAGGCGCAGGAGCGCCACGTCCTCACCATCACTGTCGACAACGAGGCA GGCATCCTCGCCAAGATCGC
Product: acetolactate synthase, large subunit
Products: NA
Alternate protein names: AHAS; Acetohydroxy-acid synthase large subunit; ALS [H]
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MTTERSGAEILVESLVAKGVEFVFGYPGGAVLPIYDALFGDERLRHILVRHEAGAAHAAEGYARATGKPGVVLVTSGPGA TNAVTGIADAFMDSIPMVVITGQVPTALIGSDAFQEADTIGITRHCTKHNYLVKDPSQLAATIDEAFRIATEGRPGPVVI DIPKDVQIATAAWSSAAPQQRNRYAPQTEGGAKEIAEAIELIAKAKAPVFYTGGGVINAGPEAARLLRELQSLTGAPVTS TLMGLGAFPADHPAWLGMLGMHGTYEANMTMNRADLVVCIGARFDDRVTGRLDAFSPNSKKIHIDIDRASINKTVQVDLP VIGDCGKVLAQLIEAWLERGYQKQDLTEWNARIDGWRARQSLAFPRRGKEIMPQLAIERLYELTRHKEPIISTEVGQHQM WAAQHFHFMKPNKWLTSGGLGTMGYGLPAAIGAQAGFPDALVIDIAGDASIQMNIQELGTATQYRLPVKVFVLNNEWMGM VRQWQELTYESRYSNSYSDSLPDFVKLAEAYGWKGIRITDESELDAGIQAMIDHDGPVFVDCLVAKEANCFPMIPSGAAH TDMILYGDEVAGTMDDEAKALV
Sequences:
>Translated_582_residues MTTERSGAEILVESLVAKGVEFVFGYPGGAVLPIYDALFGDERLRHILVRHEAGAAHAAEGYARATGKPGVVLVTSGPGA TNAVTGIADAFMDSIPMVVITGQVPTALIGSDAFQEADTIGITRHCTKHNYLVKDPSQLAATIDEAFRIATEGRPGPVVI DIPKDVQIATAAWSSAAPQQRNRYAPQTEGGAKEIAEAIELIAKAKAPVFYTGGGVINAGPEAARLLRELQSLTGAPVTS TLMGLGAFPADHPAWLGMLGMHGTYEANMTMNRADLVVCIGARFDDRVTGRLDAFSPNSKKIHIDIDRASINKTVQVDLP VIGDCGKVLAQLIEAWLERGYQKQDLTEWNARIDGWRARQSLAFPRRGKEIMPQLAIERLYELTRHKEPIISTEVGQHQM WAAQHFHFMKPNKWLTSGGLGTMGYGLPAAIGAQAGFPDALVIDIAGDASIQMNIQELGTATQYRLPVKVFVLNNEWMGM VRQWQELTYESRYSNSYSDSLPDFVKLAEAYGWKGIRITDESELDAGIQAMIDHDGPVFVDCLVAKEANCFPMIPSGAAH TDMILYGDEVAGTMDDEAKALV >Mature_581_residues TTERSGAEILVESLVAKGVEFVFGYPGGAVLPIYDALFGDERLRHILVRHEAGAAHAAEGYARATGKPGVVLVTSGPGAT NAVTGIADAFMDSIPMVVITGQVPTALIGSDAFQEADTIGITRHCTKHNYLVKDPSQLAATIDEAFRIATEGRPGPVVID IPKDVQIATAAWSSAAPQQRNRYAPQTEGGAKEIAEAIELIAKAKAPVFYTGGGVINAGPEAARLLRELQSLTGAPVTST LMGLGAFPADHPAWLGMLGMHGTYEANMTMNRADLVVCIGARFDDRVTGRLDAFSPNSKKIHIDIDRASINKTVQVDLPV IGDCGKVLAQLIEAWLERGYQKQDLTEWNARIDGWRARQSLAFPRRGKEIMPQLAIERLYELTRHKEPIISTEVGQHQMW AAQHFHFMKPNKWLTSGGLGTMGYGLPAAIGAQAGFPDALVIDIAGDASIQMNIQELGTATQYRLPVKVFVLNNEWMGMV RQWQELTYESRYSNSYSDSLPDFVKLAEAYGWKGIRITDESELDAGIQAMIDHDGPVFVDCLVAKEANCFPMIPSGAAHT DMILYGDEVAGTMDDEAKALV
Specific function: Valine and isoleucine biosynthesis; first step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=564, Percent_Identity=24.468085106383, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI21361361, Length=594, Percent_Identity=26.7676767676768, Blast_Score=151, Evalue=1e-36, Organism=Escherichia coli, GI87081685, Length=571, Percent_Identity=50.0875656742557, Blast_Score=558, Evalue=1e-160, Organism=Escherichia coli, GI1790104, Length=560, Percent_Identity=44.4642857142857, Blast_Score=466, Evalue=1e-132, Organism=Escherichia coli, GI1786717, Length=555, Percent_Identity=33.1531531531532, Blast_Score=293, Evalue=2e-80, Organism=Escherichia coli, GI1787096, Length=559, Percent_Identity=29.1592128801431, Blast_Score=199, Evalue=6e-52, Organism=Escherichia coli, GI1788716, Length=553, Percent_Identity=25.3164556962025, Blast_Score=147, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17531299, Length=575, Percent_Identity=27.1304347826087, Blast_Score=157, Evalue=1e-38, Organism=Caenorhabditis elegans, GI17531301, Length=575, Percent_Identity=26.9565217391304, Blast_Score=157, Evalue=2e-38, Organism=Caenorhabditis elegans, GI17542570, Length=575, Percent_Identity=26.9565217391304, Blast_Score=140, Evalue=2e-33, Organism=Saccharomyces cerevisiae, GI6323755, Length=587, Percent_Identity=47.1890971039182, Blast_Score=524, Evalue=1e-149, Organism=Saccharomyces cerevisiae, GI6320816, Length=495, Percent_Identity=24.8484848484848, Blast_Score=98, Evalue=3e-21, Organism=Saccharomyces cerevisiae, GI6320123, Length=540, Percent_Identity=23.5185185185185, Blast_Score=91, Evalue=4e-19, Organism=Saccharomyces cerevisiae, GI6323073, Length=501, Percent_Identity=24.5508982035928, Blast_Score=85, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6323163, Length=325, Percent_Identity=26.7692307692308, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6321524, Length=495, Percent_Identity=23.4343434343434, Blast_Score=79, Evalue=2e-15, Organism=Drosophila melanogaster, GI19922626, Length=579, Percent_Identity=24.5250431778929, Blast_Score=149, Evalue=6e-36,
Paralogues:
None
Copy number: 340 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012846 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =2.2.1.6 [H]
Molecular weight: Translated: 63005; Mature: 62873
Theoretical pI: Translated: 5.08; Mature: 5.08
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTERSGAEILVESLVAKGVEFVFGYPGGAVLPIYDALFGDERLRHILVRHEAGAAHAAE CCCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCHHHC GYARATGKPGVVLVTSGPGATNAVTGIADAFMDSIPMVVITGQVPTALIGSDAFQEADTI CHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHCCHHHHHHHHC GITRHCTKHNYLVKDPSQLAATIDEAFRIATEGRPGPVVIDIPKDVQIATAAWSSAAPQQ CHHHHHCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCHH RNRYAPQTEGGAKEIAEAIELIAKAKAPVFYTGGGVINAGPEAARLLRELQSLTGAPVTS HHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHHHHHCCCCHHH TLMGLGAFPADHPAWLGMLGMHGTYEANMTMNRADLVVCIGARFDDRVTGRLDAFSPNSK HHHHCCCCCCCCCHHHHHHCCCCEEECCEEECCCCEEEEECCCCCCCCCCEEECCCCCCC KIHIDIDRASINKTVQVDLPVIGDCGKVLAQLIEAWLERGYQKQDLTEWNARIDGWRARQ EEEEEEECCCCCCEEEEECCEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHH SLAFPRRGKEIMPQLAIERLYELTRHKEPIISTEVGQHQMWAAQHFHFMKPNKWLTSGGL HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCEEECCCCEEECCCC GTMGYGLPAAIGAQAGFPDALVIDIAGDASIQMNIQELGTATQYRLPVKVFVLNNEWMGM CCCCCCCCHHHCCCCCCCCEEEEEECCCCEEEEEHHHHCCCCEEECEEEEEEECCHHHHH VRQWQELTYESRYSNSYSDSLPDFVKLAEAYGWKGIRITDESELDAGIQAMIDHDGPVFV HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHCCCHHEEECCCCCEEE DCLVAKEANCFPMIPSGAAHTDMILYGDEVAGTMDDEAKALV EEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHCCC >Mature Secondary Structure TTERSGAEILVESLVAKGVEFVFGYPGGAVLPIYDALFGDERLRHILVRHEAGAAHAAE CCCCCHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHCHHHHHHHHHHCCCCCCHHHC GYARATGKPGVVLVTSGPGATNAVTGIADAFMDSIPMVVITGQVPTALIGSDAFQEADTI CHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHCCHHHHHHHHC GITRHCTKHNYLVKDPSQLAATIDEAFRIATEGRPGPVVIDIPKDVQIATAAWSSAAPQQ CHHHHHCCCCCEECCHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCEEEEECCCCCCCHH RNRYAPQTEGGAKEIAEAIELIAKAKAPVFYTGGGVINAGPEAARLLRELQSLTGAPVTS HHCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCEEECCHHHHHHHHHHHHHCCCCHHH TLMGLGAFPADHPAWLGMLGMHGTYEANMTMNRADLVVCIGARFDDRVTGRLDAFSPNSK HHHHCCCCCCCCCHHHHHHCCCCEEECCEEECCCCEEEEECCCCCCCCCCEEECCCCCCC KIHIDIDRASINKTVQVDLPVIGDCGKVLAQLIEAWLERGYQKQDLTEWNARIDGWRARQ EEEEEEECCCCCCEEEEECCEECCHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHHHHH SLAFPRRGKEIMPQLAIERLYELTRHKEPIISTEVGQHQMWAAQHFHFMKPNKWLTSGGL HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEECCCCCHHHHHHHHCEEECCCCEEECCCC GTMGYGLPAAIGAQAGFPDALVIDIAGDASIQMNIQELGTATQYRLPVKVFVLNNEWMGM CCCCCCCCHHHCCCCCCCCEEEEEECCCCEEEEEHHHHCCCCEEECEEEEEEECCHHHHH VRQWQELTYESRYSNSYSDSLPDFVKLAEAYGWKGIRITDESELDAGIQAMIDHDGPVFV HHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCEEECCCHHHCCCHHEEECCCCCEEE DCLVAKEANCFPMIPSGAAHTDMILYGDEVAGTMDDEAKALV EEEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10555290 [H]