| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is coaD
Identifier: 87200266
GI number: 87200266
Start: 2392122
End: 2392634
Strand: Reverse
Name: coaD
Synonym: Saro_2252
Alternate gene names: 87200266
Gene position: 2392634-2392122 (Counterclockwise)
Preceding gene: 87200267
Following gene: 87200265
Centisome position: 67.18
GC content: 62.57
Gene sequence:
>513_bases ATGGCCGAACGTATCGGCGTATACCCCGGAACTTTCGATCCGATCACGCTCGGGCATCTCGACATCATCCGTCGCGGCGC CAAGCTGGTCGACAAGCTGATCATCGGCGTGACTACCAACCCGTCGAAGAACCCGATGTTCACCCCGGACGAGCGCATGG ACAGCGTCCGTCGCGAAGTGGCGGCGCAAGGCATCGACAATGTCGAGGTCGTCGGCTTCAACGCGCTGCTGATGAAGTTC GCGCGTGCGCAGGGCGCCAGCGTGATCGTGCGCGGGCTGCGGGCCGTCGCCGACTTCGAGTACGAATACCAGATGGCCGG CATGAACCAGCAGCTCGATGCCGAGATCGAGACGGTATTCCTCATGGCGGACGTCAGCTTGCAGCCGATCGCGTCAAAGC TGGTCAAGGAAATCGCGCTGTTCGGTGGCGACATTTCCGACTTCGTGACGCCCACTATCCGCGACGAGGTGGTTGCCCGC GTGGACAGTATCGGGCGGCTGGGCGACTACTGA
Upstream 100 bases:
>100_bases GACTGCTGGTGAACCAGGCGGTCGAACATCTTGCAAGCTATGGTCCCGAAGCGGACCTGCTGCGCGAACTTGCGCGCTTC ATCGTGGAGAGGAACCACTG
Downstream 100 bases:
>100_bases CGCAGGAGGGCGGGCCTCTCGCCCGCGGCACTCGTTCATTGCAGTGACAGCGCGTCCGGCCTATTGGCGGCGCAACCTAT CCGGAGTTCCACCTTATCAT
Product: phosphopantetheine adenylyltransferase
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]
Number of amino acids: Translated: 170; Mature: 169
Protein sequence:
>170_residues MAERIGVYPGTFDPITLGHLDIIRRGAKLVDKLIIGVTTNPSKNPMFTPDERMDSVRREVAAQGIDNVEVVGFNALLMKF ARAQGASVIVRGLRAVADFEYEYQMAGMNQQLDAEIETVFLMADVSLQPIASKLVKEIALFGGDISDFVTPTIRDEVVAR VDSIGRLGDY
Sequences:
>Translated_170_residues MAERIGVYPGTFDPITLGHLDIIRRGAKLVDKLIIGVTTNPSKNPMFTPDERMDSVRREVAAQGIDNVEVVGFNALLMKF ARAQGASVIVRGLRAVADFEYEYQMAGMNQQLDAEIETVFLMADVSLQPIASKLVKEIALFGGDISDFVTPTIRDEVVAR VDSIGRLGDY >Mature_169_residues AERIGVYPGTFDPITLGHLDIIRRGAKLVDKLIIGVTTNPSKNPMFTPDERMDSVRREVAAQGIDNVEVVGFNALLMKFA RAQGASVIVRGLRAVADFEYEYQMAGMNQQLDAEIETVFLMADVSLQPIASKLVKEIALFGGDISDFVTPTIRDEVVARV DSIGRLGDY
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family [H]
Homologues:
Organism=Escherichia coli, GI1790065, Length=159, Percent_Identity=47.1698113207547, Blast_Score=160, Evalue=5e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.3 [H]
Molecular weight: Translated: 18663; Mature: 18532
Theoretical pI: Translated: 4.58; Mature: 4.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAERIGVYPGTFDPITLGHLDIIRRGAKLVDKLIIGVTTNPSKNPMFTPDERMDSVRREV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH AAQGIDNVEVVGFNALLMKFARAQGASVIVRGLRAVADFEYEYQMAGMNQQLDAEIETVF HHCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHEEE LMADVSLQPIASKLVKEIALFGGDISDFVTPTIRDEVVARVDSIGRLGDY EEECCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure AERIGVYPGTFDPITLGHLDIIRRGAKLVDKLIIGVTTNPSKNPMFTPDERMDSVRREV CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHH AAQGIDNVEVVGFNALLMKFARAQGASVIVRGLRAVADFEYEYQMAGMNQQLDAEIETVF HHCCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHCCCCCCCCCCHHHEEE LMADVSLQPIASKLVKEIALFGGDISDFVTPTIRDEVVARVDSIGRLGDY EEECCCHHHHHHHHHHHHHHHCCCHHHHCCCHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA