| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is yqeY [H]
Identifier: 87200247
GI number: 87200247
Start: 2374724
End: 2375179
Strand: Direct
Name: yqeY [H]
Synonym: Saro_2232
Alternate gene names: 87200247
Gene position: 2374724-2375179 (Clockwise)
Preceding gene: 87200243
Following gene: 87200248
Centisome position: 66.68
GC content: 65.35
Gene sequence:
>456_bases ATGATCCGCGACACGATCAAGGCCGCGCAGGTGGCCGCCATGAAGTCTGGCGACAAGCCCCGTCTCGCCGCCGTCCGCCT CATCCTTGCCAAGCTCAAGGACAAGGACATCGAACTGCGTACCGCGTCGGCCGTGCCGGAGGACGACGTGCTCGTCACCG ACGTCCTCCAGAAGATGGCCAAGCAGCGCCGCGAATCGATCACGCTCTACGAACAGGGCGGCCGACAGGAACTGGCTGAC GTGGAAAAGGCCGAGCTGGCGGTGATCGAGGAATTCCTGCCGCAGCAGATGAGCGAGGACGACACCAAGGCGGCCATCGC CGCGATCATCGCCGAGACCGGTGCGGCAGGCATGAAGGACATGGGCAAGGTCGTGGCGGCGCTCAAGGCGAAACACGGCA CTCAGCTCGACATGGGCAAGGCAAGCGGGCTGGTGAAGGCTGCGCTGGCCGGCTGA
Upstream 100 bases:
>100_bases CTGCATTGCCGCAGCGTCAACCTAGCGATTCCCGAAAGTTTCCCCTACATGTGCGGTTTCCCGCTTTTGGCGGGCCAAAC TCCACAGGAAATACGTTTAC
Downstream 100 bases:
>100_bases CACGTTAGCTCCCCTCCCGCCTGCGGGAGGGGCTGGGGGAGGGCATGTTGGCCGACGGAACCAGTTGGGACCAGGACCGA GACTTTGATCGTGCCTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 151; Mature: 151
Protein sequence:
>151_residues MIRDTIKAAQVAAMKSGDKPRLAAVRLILAKLKDKDIELRTASAVPEDDVLVTDVLQKMAKQRRESITLYEQGGRQELAD VEKAELAVIEEFLPQQMSEDDTKAAIAAIIAETGAAGMKDMGKVVAALKAKHGTQLDMGKASGLVKAALAG
Sequences:
>Translated_151_residues MIRDTIKAAQVAAMKSGDKPRLAAVRLILAKLKDKDIELRTASAVPEDDVLVTDVLQKMAKQRRESITLYEQGGRQELAD VEKAELAVIEEFLPQQMSEDDTKAAIAAIIAETGAAGMKDMGKVVAALKAKHGTQLDMGKASGLVKAALAG >Mature_151_residues MIRDTIKAAQVAAMKSGDKPRLAAVRLILAKLKDKDIELRTASAVPEDDVLVTDVLQKMAKQRRESITLYEQGGRQELAD VEKAELAVIEEFLPQQMSEDDTKAAIAAIIAETGAAGMKDMGKVVAALKAKHGTQLDMGKASGLVKAALAG
Specific function: Unknown
COG id: COG1610
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003789 - InterPro: IPR023168 - InterPro: IPR019004 [H]
Pfam domain/function: PF09424 YqeY [H]
EC number: NA
Molecular weight: Translated: 16085; Mature: 16085
Theoretical pI: Translated: 7.54; Mature: 7.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRDTIKAAQVAAMKSGDKPRLAAVRLILAKLKDKDIELRTASAVPEDDVLVTDVLQKMA CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH KQRRESITLYEQGGRQELADVEKAELAVIEEFLPQQMSEDDTKAAIAAIIAETGAAGMKD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH MGKVVAALKAKHGTQLDMGKASGLVKAALAG HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MIRDTIKAAQVAAMKSGDKPRLAAVRLILAKLKDKDIELRTASAVPEDDVLVTDVLQKMA CCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHHH KQRRESITLYEQGGRQELADVEKAELAVIEEFLPQQMSEDDTKAAIAAIIAETGAAGMKD HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCHHH MGKVVAALKAKHGTQLDMGKASGLVKAALAG HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377; 9023197 [H]