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The map label for this gene is traI [C]

Identifier: 87200198

GI number: 87200198

Start: 2323464

End: 2324249

Strand: Reverse

Name: traI [C]

Synonym: Saro_2182

Alternate gene names: 87200198

Gene position: 2324249-2323464 (Counterclockwise)

Preceding gene: 87200199

Following gene: 87200197

Centisome position: 65.26

GC content: 62.72

Gene sequence:

>786_bases
ATGCGGCTCCAAACCCTGTCGCGCGTCAATGTAACCCGCGAGGAGCTGCGCTATGCGAGCAACTATGCGCCCGGCATGGT
GGTCGAGGTCGCGCGGCGTCAGCGCAGCCAGGGCCTTGCAGCAGGCGAATACCGGGTGGTCGGAACAGATGTGGCGCGCG
AGCGGGTCACGCTGGAGAACGCGCGTGGCCGCCAGTTCGAGTTTCGTCCCGGTCAGATCCGGCCGCAAGGTGAGCAGGAT
CCGCTGCGCCTGTTCGAAGTTCGCGCCCTCGACATTTATACCGGCGACAAGATCCGGTGGACCGAGACCGATCACCAGCG
GGGCCTGCTCAATGCCGACCAGGCCCGGATTGTCGCTATCGACAAAGAGGCTGTCGTGGTGAAGACATCCTTGGGCGCAG
AGCACAGACTCGAACGCGACGATCCAATGCTGCGACGTCTCGATCTCGCCTATGCGCTCAATGCCCATATGGCGCAGGGG
CTGACCTCCGATCGCGGCATTGCTGTCATGGACAGTCGCGAGCGCAATCTGGCCAACCAGCAGACGTTCCTGGTGACAGT
CACACGGCTGCGCGATCGCCTAACGCTCTATGTCGACAATGCTGGCAAGCTTGAAGCGGCGGTCGAGCGCAATGCCGGTA
TGAAGCGCTCGGCGCTGGAAACGGTCGATCTCCTCCGCGACGCTGCGTCCAAAGGGCAGGCCAAAGATCGTGTCGATCCT
GCACCGGAACGCAAGCCGCCAGAGCTTGACCGGTCGATTACCAAGCCATTCGAGATCGGCATCTAG

Upstream 100 bases:

>100_bases
GGCAACCGCGATTTATGCCTCAGGCCGAAACTTGCGCAGCGCCGTGAACGAGGCTGTGCAGACAGGCCTCAAATCCAGCG
GCGAGCTTGGTCCTGACACC

Downstream 100 bases:

>100_bases
CGTCCCGCTGTCCCCATGCGTCCGCACATGGCCGGTTGACGCGAAGTTCTTTATTTGTTCTCATTGACCTATGCCTCGAA
TCTCCGACGATATCCTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: Conjugative Relaxase Domain Protein; DNA Helicase; Conjugative Relaxase Region-Like Protein; TraC Protein; Conjugal Transfer Protein; Mobilization Protein TraI; DNA Relaxase/Conjugal Transfer Nickase-Helicase TrwC; TrwC Relaxase Family; TraI Protein; Exonuclease V Subunit Alpha; Conjugative Transfer Protein TraI

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MRLQTLSRVNVTREELRYASNYAPGMVVEVARRQRSQGLAAGEYRVVGTDVARERVTLENARGRQFEFRPGQIRPQGEQD
PLRLFEVRALDIYTGDKIRWTETDHQRGLLNADQARIVAIDKEAVVVKTSLGAEHRLERDDPMLRRLDLAYALNAHMAQG
LTSDRGIAVMDSRERNLANQQTFLVTVTRLRDRLTLYVDNAGKLEAAVERNAGMKRSALETVDLLRDAASKGQAKDRVDP
APERKPPELDRSITKPFEIGI

Sequences:

>Translated_261_residues
MRLQTLSRVNVTREELRYASNYAPGMVVEVARRQRSQGLAAGEYRVVGTDVARERVTLENARGRQFEFRPGQIRPQGEQD
PLRLFEVRALDIYTGDKIRWTETDHQRGLLNADQARIVAIDKEAVVVKTSLGAEHRLERDDPMLRRLDLAYALNAHMAQG
LTSDRGIAVMDSRERNLANQQTFLVTVTRLRDRLTLYVDNAGKLEAAVERNAGMKRSALETVDLLRDAASKGQAKDRVDP
APERKPPELDRSITKPFEIGI
>Mature_261_residues
MRLQTLSRVNVTREELRYASNYAPGMVVEVARRQRSQGLAAGEYRVVGTDVARERVTLENARGRQFEFRPGQIRPQGEQD
PLRLFEVRALDIYTGDKIRWTETDHQRGLLNADQARIVAIDKEAVVVKTSLGAEHRLERDDPMLRRLDLAYALNAHMAQG
LTSDRGIAVMDSRERNLANQQTFLVTVTRLRDRLTLYVDNAGKLEAAVERNAGMKRSALETVDLLRDAASKGQAKDRVDP
APERKPPELDRSITKPFEIGI

Specific function: traI Has Been Identified As DNA Helicase I And It Also Has An Additional Activity Of Site-Specific Nicking At Orit. DNA Helicase I Is A Potent DNA-Dependent ATPase. [C]

COG id: COG0507

COG function: function code L; ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.6.1.- [C]

Molecular weight: Translated: 29530; Mature: 29530

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLQTLSRVNVTREELRYASNYAPGMVVEVARRQRSQGLAAGEYRVVGTDVARERVTLEN
CCCCCHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCC
ARGRQFEFRPGQIRPQGEQDPLRLFEVRALDIYTGDKIRWTETDHQRGLLNADQARIVAI
CCCCEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEEEEE
DKEAVVVKTSLGAEHRLERDDPMLRRLDLAYALNAHMAQGLTSDRGIAVMDSRERNLANQ
CCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHCCCCC
QTFLVTVTRLRDRLTLYVDNAGKLEAAVERNAGMKRSALETVDLLRDAASKGQAKDRVDP
CEEEEEHHHHHCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
APERKPPELDRSITKPFEIGI
CCCCCCCHHHHHHCCCEECCC
>Mature Secondary Structure
MRLQTLSRVNVTREELRYASNYAPGMVVEVARRQRSQGLAAGEYRVVGTDVARERVTLEN
CCCCCHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHHCC
ARGRQFEFRPGQIRPQGEQDPLRLFEVRALDIYTGDKIRWTETDHQRGLLNADQARIVAI
CCCCEEECCCCCCCCCCCCCCEEEEEEEEEEEEECCEEEEECCCCCCCCCCCCCEEEEEE
DKEAVVVKTSLGAEHRLERDDPMLRRLDLAYALNAHMAQGLTSDRGIAVMDSRERNLANQ
CCCEEEEEECCCCHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCHHCCCCC
QTFLVTVTRLRDRLTLYVDNAGKLEAAVERNAGMKRSALETVDLLRDAASKGQAKDRVDP
CEEEEEHHHHHCEEEEEECCCCCHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC
APERKPPELDRSITKPFEIGI
CCCCCCCHHHHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on acid anhydrides; In phosphorus-containing anhydrides [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA