Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200167

Identifier: 87200167

GI number: 87200167

Start: 2292907

End: 2293533

Strand: Reverse

Name: 87200167

Synonym: Saro_2151

Alternate gene names: NA

Gene position: 2293533-2292907 (Counterclockwise)

Preceding gene: 87200169

Following gene: 87200166

Centisome position: 64.4

GC content: 63.48

Gene sequence:

>627_bases
TTGGCCGACAGCTGCTGCGAAAACGCGTGCGGAAGCGCGAAGACGCTGAATGATCCGCATTGGCGACGTGCGCTGTGGAT
CGCTCTAGCAGTCAATGCAGGGATGTTCGGCGTCGATATGTTTGCAGGCTCGGCGGCCGATAGCCGCGCCCTTCAGGCTG
ATGCGCTCGATTTCCTGGGGGATGCAGCCAACTACGCCATCAGTCTGCTGGTCGCCGGAATGGCGGTCAGCTGGCGCGCG
CGGGCCGCTCTCGCCAAAGGGCTGACCCTCGTGGCGTTTGGTGGCTGGGTACTGCTGACCGCAGTCATGGCAACCCTAGG
TGGCGCATCACCAGAGCCAGCGACGATGGGAATCGTCGGGTTTCTGGCGCTCGTGACCAATGCGGGCGTCGCGTTGATGC
TCTACCGCTTCCGCACCGGGGACGCGAACATGCGGTCAGTGTGGATCTGCTCGCGCAATGATGCGGTCGGTAATCTGGCT
GTCATGGCCGCCGCGTTGGGTGTCTTTGGAACCGGCAGCGCGTGGCCTGACCTTATCGTGGCGGCAATTCTGGCATCACT
CGGCATCAGCGGCGGTCTCCAGATCGTGCGCCATGCGATGCGCGAGATGCAGGAGGCAACCGCATGA

Upstream 100 bases:

>100_bases
CGGTCACCTTCGACAACTCGCCGATTTTCATTGCTTGACCCTGTAGTTGCTACAGGGTGTACGTAGCAAGCCGACTCGAA
AATTGTCGAGGAGGAATTCG

Downstream 100 bases:

>100_bases
CGCGCGATCTCGCACAGGCGGTCGTGGCGGAGGAAATGACGGCCTTCGACCTGGCTCGCGCCGCTGGCGAGACCGCGAAC
GCGTGGCGGGCGCTTGAGCG

Product: cation efflux protein

Products: NA

Alternate protein names: Co/Zn/Cd Efflux System Component; Cation Efflux Family Protein; Cation Efflux System Protein; Integral Membrane Protein; Co/Zn/Cd Efflux System Membrane Component; Cation Efflux Permease; Cation Efflux System Permease; Cation Diffusion Facilitator Family Transporter; Cation Diffusion Facilitator; Heavy Metal Detoxification Protein; Transmembrane Protein; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux Protein ; CDF Family Heavy Metal/H(+) Antiporter; Co/Zn/Cd Efflux Protein; RND OM Export Protein; RND Efflux System Protein; Co/Zn/Cd Efflux System Protein; Zinc Transporter; CDF Family Cobalt/Cadmium/Zinc Transporter

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MADSCCENACGSAKTLNDPHWRRALWIALAVNAGMFGVDMFAGSAADSRALQADALDFLGDAANYAISLLVAGMAVSWRA
RAALAKGLTLVAFGGWVLLTAVMATLGGASPEPATMGIVGFLALVTNAGVALMLYRFRTGDANMRSVWICSRNDAVGNLA
VMAAALGVFGTGSAWPDLIVAAILASLGISGGLQIVRHAMREMQEATA

Sequences:

>Translated_208_residues
MADSCCENACGSAKTLNDPHWRRALWIALAVNAGMFGVDMFAGSAADSRALQADALDFLGDAANYAISLLVAGMAVSWRA
RAALAKGLTLVAFGGWVLLTAVMATLGGASPEPATMGIVGFLALVTNAGVALMLYRFRTGDANMRSVWICSRNDAVGNLA
VMAAALGVFGTGSAWPDLIVAAILASLGISGGLQIVRHAMREMQEATA
>Mature_207_residues
ADSCCENACGSAKTLNDPHWRRALWIALAVNAGMFGVDMFAGSAADSRALQADALDFLGDAANYAISLLVAGMAVSWRAR
AALAKGLTLVAFGGWVLLTAVMATLGGASPEPATMGIVGFLALVTNAGVALMLYRFRTGDANMRSVWICSRNDAVGNLAV
MAAALGVFGTGSAWPDLIVAAILASLGISGGLQIVRHAMREMQEATA

Specific function: Unknown

COG id: COG1230

COG function: function code P; Co/Zn/Cd efflux system component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21423; Mature: 21292

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSCCENACGSAKTLNDPHWRRALWIALAVNAGMFGVDMFAGSAADSRALQADALDFLG
CCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
DAANYAISLLVAGMAVSWRARAALAKGLTLVAFGGWVLLTAVMATLGGASPEPATMGIVG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FLALVTNAGVALMLYRFRTGDANMRSVWICSRNDAVGNLAVMAAALGVFGTGSAWPDLIV
HHHHHHCCCHHHHHEEHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHH
AAILASLGISGGLQIVRHAMREMQEATA
HHHHHHHCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
ADSCCENACGSAKTLNDPHWRRALWIALAVNAGMFGVDMFAGSAADSRALQADALDFLG
CCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHHHH
DAANYAISLLVAGMAVSWRARAALAKGLTLVAFGGWVLLTAVMATLGGASPEPATMGIVG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHEEHHHHHHHHHHHHHHCCCCCCCHHHHHHH
FLALVTNAGVALMLYRFRTGDANMRSVWICSRNDAVGNLAVMAAALGVFGTGSAWPDLIV
HHHHHHCCCHHHHHEEHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCCCCHHHHH
AAILASLGISGGLQIVRHAMREMQEATA
HHHHHHHCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA