Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87200125

Identifier: 87200125

GI number: 87200125

Start: 2245284

End: 2246075

Strand: Direct

Name: 87200125

Synonym: Saro_2109

Alternate gene names: NA

Gene position: 2245284-2246075 (Clockwise)

Preceding gene: 87200120

Following gene: 87200129

Centisome position: 63.04

GC content: 70.08

Gene sequence:

>792_bases
ATGGCCACGTCACCCCCCACTATTTTCGCGCCGAAACGGCGTAATGCCGTCCGCCAGCGCATGGCCGCGCTCCAGGGCCG
CCCCGACGCCGCACGCTACATCGCCGACGACATGGCCGACGATGTGCTCGACCGCCTGTCCTTCCTCCGCCACGAACCGC
GCGAGGCGCTGGTCGTCGGAGACTGGACCGGCACGGTTCCCGGCGGGCTGCGCGCCACTGGGGCACAGGTCGAAGAGCGC
GATCCCGCTCTCGGTACCGCCCTGCTCGACGAGGAAGCCCCCTACCCCGGCGACGACAAGTTCGATTTCATCGCCAGCCT
CGGCACGCTCGACACCGTGAACGACCTTCCGGGCGCGCTGGTCCATCTCCGGCGCGCGCTGGCGGATGGCGGGCTGATGA
TCGCGAGCTTCCCGGGAGCCGGTTCGCTGCCCGCGCTGCGCGCCATCATGTTCGAAGCCGATGGCGAGCGCCCCTCTCCG
CGCATCCACCCGCAAGTCGATGTCCGGGCTGGCGGCCAGTTGCTGCAACGCTGCGGCTTTGCCGACCCGGTGATCGACAG
CCACCACATCGATGTGCGCTTCGGTTCGTTCGAGCGCATGATCGGCGACTTGCGCGAACAGGGGCTGACGAGCTGCCTCG
CACGGCCCGGTGCCCCCCTCGGCCGGACAGCCCTCGCCCGCGCGCAGTCAGCCTTCGACGCGCGCCGGGACGCTGACGGC
AAGGTGACCGAACGCTTCGAGATCCTGACCCTCAGCGGGTGGGCGAAACCGCTCCGCCCGCCGAAGTTCTGA

Upstream 100 bases:

>100_bases
GGTCGAGCGCGGACAGCCAGGACATGCCCAGGGACATGGCATCGTTGTCGACAGCGCCTTGAGGCTTGGCAAGAGCGCCC
CGGACAGGCAGGGCCCGGAA

Downstream 100 bases:

>100_bases
GCCGCCCGAAGGCGGCTCCTGATCAGGCGAGTGCCGCTTGCGCCGCCGAAAGCCGGGCGATCGGCACGCGATAGGGGCTG
GCCGAGACGTAATCGAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: SAM-Dependent Methyltransferase; Methyltransferase; SAM-Dependent Methyltransferase Protein; Biotin Biosynthesis Protein BioC; Methyltransferase Domain Family; S-Adenosyl-L-Methionine-Dependent Methyltransferases; Biotin Synthesis Protein; Biotin Synthesis Protein Bioc; Methyltransferase Family Protein; Biotin Synthesis Protein BioC

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MATSPPTIFAPKRRNAVRQRMAALQGRPDAARYIADDMADDVLDRLSFLRHEPREALVVGDWTGTVPGGLRATGAQVEER
DPALGTALLDEEAPYPGDDKFDFIASLGTLDTVNDLPGALVHLRRALADGGLMIASFPGAGSLPALRAIMFEADGERPSP
RIHPQVDVRAGGQLLQRCGFADPVIDSHHIDVRFGSFERMIGDLREQGLTSCLARPGAPLGRTALARAQSAFDARRDADG
KVTERFEILTLSGWAKPLRPPKF

Sequences:

>Translated_263_residues
MATSPPTIFAPKRRNAVRQRMAALQGRPDAARYIADDMADDVLDRLSFLRHEPREALVVGDWTGTVPGGLRATGAQVEER
DPALGTALLDEEAPYPGDDKFDFIASLGTLDTVNDLPGALVHLRRALADGGLMIASFPGAGSLPALRAIMFEADGERPSP
RIHPQVDVRAGGQLLQRCGFADPVIDSHHIDVRFGSFERMIGDLREQGLTSCLARPGAPLGRTALARAQSAFDARRDADG
KVTERFEILTLSGWAKPLRPPKF
>Mature_262_residues
ATSPPTIFAPKRRNAVRQRMAALQGRPDAARYIADDMADDVLDRLSFLRHEPREALVVGDWTGTVPGGLRATGAQVEERD
PALGTALLDEEAPYPGDDKFDFIASLGTLDTVNDLPGALVHLRRALADGGLMIASFPGAGSLPALRAIMFEADGERPSPR
IHPQVDVRAGGQLLQRCGFADPVIDSHHIDVRFGSFERMIGDLREQGLTSCLARPGAPLGRTALARAQSAFDARRDADGK
VTERFEILTLSGWAKPLRPPKF

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI40018642, Length=273, Percent_Identity=28.5714285714286, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI86792933, Length=155, Percent_Identity=32.258064516129, Blast_Score=71, Evalue=1e-12,
Organism=Drosophila melanogaster, GI19922210, Length=264, Percent_Identity=27.6515151515151, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28455; Mature: 28323

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATSPPTIFAPKRRNAVRQRMAALQGRPDAARYIADDMADDVLDRLSFLRHEPREALVVG
CCCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
DWTGTVPGGLRATGAQVEERDPALGTALLDEEAPYPGDDKFDFIASLGTLDTVNDLPGAL
CCCCCCCCCCCCCCCCCHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHCCHHH
VHLRRALADGGLMIASFPGAGSLPALRAIMFEADGERPSPRIHPQVDVRAGGQLLQRCGF
HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHCCC
ADPVIDSHHIDVRFGSFERMIGDLREQGLTSCLARPGAPLGRTALARAQSAFDARRDADG
CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
KVTERFEILTLSGWAKPLRPPKF
CHHHEEEEEEECCCCCCCCCCCC
>Mature Secondary Structure 
ATSPPTIFAPKRRNAVRQRMAALQGRPDAARYIADDMADDVLDRLSFLRHEPREALVVG
CCCCCCEECCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
DWTGTVPGGLRATGAQVEERDPALGTALLDEEAPYPGDDKFDFIASLGTLDTVNDLPGAL
CCCCCCCCCCCCCCCCCHHCCCCHHHHHHCCCCCCCCCCHHHHHHHHCCHHHHHHCCHHH
VHLRRALADGGLMIASFPGAGSLPALRAIMFEADGERPSPRIHPQVDVRAGGQLLQRCGF
HHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCCCCCCCCCCCCEEHHHHHHHHHHCCC
ADPVIDSHHIDVRFGSFERMIGDLREQGLTSCLARPGAPLGRTALARAQSAFDARRDADG
CCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
KVTERFEILTLSGWAKPLRPPKF
CHHHEEEEEEECCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA