Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is ybaP [C]

Identifier: 87200129

GI number: 87200129

Start: 2252270

End: 2253178

Strand: Direct

Name: ybaP [C]

Synonym: Saro_2113

Alternate gene names: 87200129

Gene position: 2252270-2253178 (Clockwise)

Preceding gene: 87200125

Following gene: 87200130

Centisome position: 63.24

GC content: 66.67

Gene sequence:

>909_bases
ATGAAGCAAAGCATCCGCAACCTCCTCGCAGCATTCGCCCTGGCCGCAATCCCGCTGGCAGCTCCGGCCTGGGCCGAAAC
TCCGGCCGCAACCACCGCCGTCGCCGAAAGGCACCTGAAGCCCGCGCTCTGGAAAGTGGCCGATGCCGATACGACGATCT
ACCTGTTCGGCACGATCCACGCCTTGCCCAAGGGGCTGGTGTGGCTCGACGGGCCGGTTGCCTCGGCCCTTGCTGAATCG
GGCGAACTGGTGACCGAGATTCCCGATGCGCCAGCAGCCCAGCAACAGCAGACGGTCCGTGCCATCGGCCTGCTCCAGGG
AGAGACCTTGCGCTCGCTGATGAGCGACGCCGACCGCGCGGCCTATGAAGCGCTCCTGGCAAGGCTGCGGATTCCGGCCG
AGGCGTTCGATCCGCTGGAGCCGTGGCTGGCGGGAATCACGCTGGGCGTCATGCCCTATGCCATGGCCGGCTACGGGGCG
GACGATGGCGTGGAGGCCGTGCTGCGCAAGGCCGCGCTGGCGAAGGGCAAGAAGCAGGGCGCGCTTGAAACCGTGGAATT
CCAGCTCGGCCTGTTCGACAAGCTGCCGCGCGAGGCGCAGCTCAAGTTCCTGGGCGAAGCCGTGCGCGATTTCGACAAGG
GCACGGCAATCATCGGCACGATGACCGAAGACTGGGGCAAGGGTGATTCCGATGCTCTGGCCCGGCTACTCAACGACGAG
ATGGACGATCCCGACCTCGCCGAAGCGCTGCTTTACAAGCGCAACCGCAACTGGGCGGCGTGGATACGCAAGCGGCTGGA
CCAGCCGGGCGCGGTCTTCGTCGCCGTCGGCGCTGGCCATCTTGCAGGCGCGGGCAGCGTTCAGGACGTGCTGAAGGCAC
AAGGCATCGCCACCTCGCGGGTACAGTGA

Upstream 100 bases:

>100_bases
TCAACCGCCAAGCAGGGCCCGCGCCCCTTGCGAAGGCAAAGAGACGGGCGCCTTCATTCCTTCATTTCCCTGCAACCCCT
TTGCAGGCAATAGAACGACG

Downstream 100 bases:

>100_bases
AGCAGTTTCGCCGCCTTCTATGGGCCATCGTGCCGGCCCTGCTGCTGGGCATGGCCTTTGCGTGGATGGAGCGCAGGGAC
ACGCCGGCGCAGGACGGGCG

Product: GumN

Products: NA

Alternate protein names: GumN Protein; GumN-Family Protein; SLA2 Protein

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MKQSIRNLLAAFALAAIPLAAPAWAETPAATTAVAERHLKPALWKVADADTTIYLFGTIHALPKGLVWLDGPVASALAES
GELVTEIPDAPAAQQQQTVRAIGLLQGETLRSLMSDADRAAYEALLARLRIPAEAFDPLEPWLAGITLGVMPYAMAGYGA
DDGVEAVLRKAALAKGKKQGALETVEFQLGLFDKLPREAQLKFLGEAVRDFDKGTAIIGTMTEDWGKGDSDALARLLNDE
MDDPDLAEALLYKRNRNWAAWIRKRLDQPGAVFVAVGAGHLAGAGSVQDVLKAQGIATSRVQ

Sequences:

>Translated_302_residues
MKQSIRNLLAAFALAAIPLAAPAWAETPAATTAVAERHLKPALWKVADADTTIYLFGTIHALPKGLVWLDGPVASALAES
GELVTEIPDAPAAQQQQTVRAIGLLQGETLRSLMSDADRAAYEALLARLRIPAEAFDPLEPWLAGITLGVMPYAMAGYGA
DDGVEAVLRKAALAKGKKQGALETVEFQLGLFDKLPREAQLKFLGEAVRDFDKGTAIIGTMTEDWGKGDSDALARLLNDE
MDDPDLAEALLYKRNRNWAAWIRKRLDQPGAVFVAVGAGHLAGAGSVQDVLKAQGIATSRVQ
>Mature_302_residues
MKQSIRNLLAAFALAAIPLAAPAWAETPAATTAVAERHLKPALWKVADADTTIYLFGTIHALPKGLVWLDGPVASALAES
GELVTEIPDAPAAQQQQTVRAIGLLQGETLRSLMSDADRAAYEALLARLRIPAEAFDPLEPWLAGITLGVMPYAMAGYGA
DDGVEAVLRKAALAKGKKQGALETVEFQLGLFDKLPREAQLKFLGEAVRDFDKGTAIIGTMTEDWGKGDSDALARLLNDE
MDDPDLAEALLYKRNRNWAAWIRKRLDQPGAVFVAVGAGHLAGAGSVQDVLKAQGIATSRVQ

Specific function: Unknown

COG id: COG3735

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32202; Mature: 32202

Theoretical pI: Translated: 4.92; Mature: 4.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQSIRNLLAAFALAAIPLAAPAWAETPAATTAVAERHLKPALWKVADADTTIYLFGTIH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHH
ALPKGLVWLDGPVASALAESGELVTEIPDAPAAQQQQTVRAIGLLQGETLRSLMSDADRA
HHCCCCEEECCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AYEALLARLRIPAEAFDPLEPWLAGITLGVMPYAMAGYGADDGVEAVLRKAALAKGKKQG
HHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
ALETVEFQLGLFDKLPREAQLKFLGEAVRDFDKGTAIIGTMTEDWGKGDSDALARLLNDE
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCC
MDDPDLAEALLYKRNRNWAAWIRKRLDQPGAVFVAVGAGHLAGAGSVQDVLKAQGIATSR
CCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHC
VQ
CC
>Mature Secondary Structure
MKQSIRNLLAAFALAAIPLAAPAWAETPAATTAVAERHLKPALWKVADADTTIYLFGTIH
CHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEHH
ALPKGLVWLDGPVASALAESGELVTEIPDAPAAQQQQTVRAIGLLQGETLRSLMSDADRA
HHCCCCEEECCHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHH
AYEALLARLRIPAEAFDPLEPWLAGITLGVMPYAMAGYGADDGVEAVLRKAALAKGKKQG
HHHHHHHHHCCCHHHCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCC
ALETVEFQLGLFDKLPREAQLKFLGEAVRDFDKGTAIIGTMTEDWGKGDSDALARLLNDE
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHHCC
MDDPDLAEALLYKRNRNWAAWIRKRLDQPGAVFVAVGAGHLAGAGSVQDVLKAQGIATSR
CCCHHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCHHHC
VQ
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA