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The map label for this gene is ybbC [H]

Identifier: 87200114

GI number: 87200114

Start: 2234649

End: 2235851

Strand: Reverse

Name: ybbC [H]

Synonym: Saro_2098

Alternate gene names: 87200114

Gene position: 2235851-2234649 (Counterclockwise)

Preceding gene: 87200115

Following gene: 87200107

Centisome position: 62.78

GC content: 68.5

Gene sequence:

>1203_bases
ATGAAGTTTGGCATCGACCGGCTGCTCGCCGACCCCGCTCTCAGGAAACCGCTCGAAGGCCGCCGTATCGCGCTCGTCGC
GCATCCGGCCTCGGTGACCGAGGGCCTCGTCCATTCGCTCGACGCGCTGGCCGCGCTGCCCGAGGTTCGCCTTGCCGCCG
CCTTCGGGCCGCAGCACGGGCTGAAGGGCGACAAGCAGGACAACATGGTCGAGACCGCCGACGAGCTGGACCCGACCTAC
GGCATCCCTGTGTTCAGCCTCTACGGCGAGGTCCGCCGCCCGACCGCGCGGATGATGGACAGCGCCGACGTGTTCCTGTT
CGACCTCCAGGACCTTGGCTGCCGGATCTACACTTTCGTGACGACGCTGCTTTATCTGCTCGAAGCAGCGAGCGGGACGG
GCAAGGCGGTCTGGGTGCTCGATCGCCCGAATCCCGCCGGCCGTCCGGTGGAAGGCACGACGCTCCTGCCGGGCTGGGAA
AGCTTCGTCGGGGCGGGGCCGATGCCGATGCGCCACGGGATGACCCTGGGCGAAATGGGCGCCTGGTTCGTCGAGCACTT
CAAGCTCGACGTCGATTACCGCGTGATCGCGATGGAAGGCTGGACTCCCGGCGAGGGTCCGGGCTGGGGCTGGCCGGAGA
GCCGCATCTGGGTGAACCCTTCGCCCAATGCCGCGAGCCTCAACATGGCGCGGGCCTATGCCGGCACGGTCATGATCGAG
GGCGCGACGCTTTCGGAAGGGCGCGGCACCACGCGCCCGCTCGAGGTGCTGTTCGGCGCGCCCGACGTGGACGCCAGGGC
GGTGCTGGCCGAAATGCGCGGCTTCGCGCCGCAGTGGATGCAAGGCTGCGCGATCCGCGAGTGCTGGTTCGAGCCGACCT
TCCACAAGCACGCGAAGAGCCTGTGCAGCGCGCTGATGATCCACGCCGAGGGCGCGTTCTACGATCACCACGCGTTCCGC
CCGTGGCGCTTGCAGGCGCTGGCGTTCAAGGCGATCCGGCGGCTCTGGCCGGACTACCCGATCTGGCGCGATTTCCCCTA
CGAGTACGTGTTCGACAAGCTGGCGATCGACGTGATCAACGGCGGTCCCGCGCTGCGCGAGTGGGTGGACGACATGGGCA
GCGAGGCGGGCGATCTCGATTCGATGGCCGGGGCGGACGAAGCGGCCTGGATCGAGGAGCGGCAGCGCTTCCTGCTCTAC
TGA

Upstream 100 bases:

>100_bases
GCGGGCACAAGTCCTGGTGGGCCATCGCGCATGGCGCAGCCCGGCCCGATTTCCATCACGACGCTTGCTTCGCCGTCCGG
CTTGCGGCAGCGAACGCGGC

Downstream 100 bases:

>100_bases
TCGCGTTCAGGTTGGAGCGCCGTTTTCCTGAACAGGTTTACGGGGTTTACACGGTCCAGAGAGAAAGACGCGGCCCCCCT
CGCAGGAAGAAATCCGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: ORF2 [H]

Number of amino acids: Translated: 400; Mature: 400

Protein sequence:

>400_residues
MKFGIDRLLADPALRKPLEGRRIALVAHPASVTEGLVHSLDALAALPEVRLAAAFGPQHGLKGDKQDNMVETADELDPTY
GIPVFSLYGEVRRPTARMMDSADVFLFDLQDLGCRIYTFVTTLLYLLEAASGTGKAVWVLDRPNPAGRPVEGTTLLPGWE
SFVGAGPMPMRHGMTLGEMGAWFVEHFKLDVDYRVIAMEGWTPGEGPGWGWPESRIWVNPSPNAASLNMARAYAGTVMIE
GATLSEGRGTTRPLEVLFGAPDVDARAVLAEMRGFAPQWMQGCAIRECWFEPTFHKHAKSLCSALMIHAEGAFYDHHAFR
PWRLQALAFKAIRRLWPDYPIWRDFPYEYVFDKLAIDVINGGPALREWVDDMGSEAGDLDSMAGADEAAWIEERQRFLLY

Sequences:

>Translated_400_residues
MKFGIDRLLADPALRKPLEGRRIALVAHPASVTEGLVHSLDALAALPEVRLAAAFGPQHGLKGDKQDNMVETADELDPTY
GIPVFSLYGEVRRPTARMMDSADVFLFDLQDLGCRIYTFVTTLLYLLEAASGTGKAVWVLDRPNPAGRPVEGTTLLPGWE
SFVGAGPMPMRHGMTLGEMGAWFVEHFKLDVDYRVIAMEGWTPGEGPGWGWPESRIWVNPSPNAASLNMARAYAGTVMIE
GATLSEGRGTTRPLEVLFGAPDVDARAVLAEMRGFAPQWMQGCAIRECWFEPTFHKHAKSLCSALMIHAEGAFYDHHAFR
PWRLQALAFKAIRRLWPDYPIWRDFPYEYVFDKLAIDVINGGPALREWVDDMGSEAGDLDSMAGADEAAWIEERQRFLLY
>Mature_400_residues
MKFGIDRLLADPALRKPLEGRRIALVAHPASVTEGLVHSLDALAALPEVRLAAAFGPQHGLKGDKQDNMVETADELDPTY
GIPVFSLYGEVRRPTARMMDSADVFLFDLQDLGCRIYTFVTTLLYLLEAASGTGKAVWVLDRPNPAGRPVEGTTLLPGWE
SFVGAGPMPMRHGMTLGEMGAWFVEHFKLDVDYRVIAMEGWTPGEGPGWGWPESRIWVNPSPNAASLNMARAYAGTVMIE
GATLSEGRGTTRPLEVLFGAPDVDARAVLAEMRGFAPQWMQGCAIRECWFEPTFHKHAKSLCSALMIHAEGAFYDHHAFR
PWRLQALAFKAIRRLWPDYPIWRDFPYEYVFDKLAIDVINGGPALREWVDDMGSEAGDLDSMAGADEAAWIEERQRFLLY

Specific function: Unknown

COG id: COG3876

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008302 [H]

Pfam domain/function: PF07075 DUF1343 [H]

EC number: NA

Molecular weight: Translated: 44484; Mature: 44484

Theoretical pI: Translated: 4.97; Mature: 4.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKFGIDRLLADPALRKPLEGRRIALVAHPASVTEGLVHSLDALAALPEVRLAAAFGPQHG
CCCCHHHHHCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
LKGDKQDNMVETADELDPTYGIPVFSLYGEVRRPTARMMDSADVFLFDLQDLGCRIYTFV
CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHCCCCEEEEEHHHCCHHHHHHH
TTLLYLLEAASGTGKAVWVLDRPNPAGRPVEGTTLLPGWESFVGAGPMPMRHGMTLGEMG
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEECCCHHHHHCCCCCCHHCCCCHHHHH
AWFVEHFKLDVDYRVIAMEGWTPGEGPGWGWPESRIWVNPSPNAASLNMARAYAGTVMIE
HHHHHHHEECCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCEEEEE
GATLSEGRGTTRPLEVLFGAPDVDARAVLAEMRGFAPQWMQGCAIRECWFEPTFHKHAKS
CCEECCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHCCCHHHHHHHH
LCSALMIHAEGAFYDHHAFRPWRLQALAFKAIRRLWPDYPIWRDFPYEYVFDKLAIDVIN
HHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEC
GGPALREWVDDMGSEAGDLDSMAGADEAAWIEERQRFLLY
CCHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MKFGIDRLLADPALRKPLEGRRIALVAHPASVTEGLVHSLDALAALPEVRLAAAFGPQHG
CCCCHHHHHCCHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
LKGDKQDNMVETADELDPTYGIPVFSLYGEVRRPTARMMDSADVFLFDLQDLGCRIYTFV
CCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHCCHHHHHCCCCEEEEEHHHCCHHHHHHH
TTLLYLLEAASGTGKAVWVLDRPNPAGRPVEGTTLLPGWESFVGAGPMPMRHGMTLGEMG
HHHHHHHHHCCCCCCEEEEEECCCCCCCCCCCCEECCCHHHHHCCCCCCHHCCCCHHHHH
AWFVEHFKLDVDYRVIAMEGWTPGEGPGWGWPESRIWVNPSPNAASLNMARAYAGTVMIE
HHHHHHHEECCCEEEEEEECCCCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHCCEEEEE
GATLSEGRGTTRPLEVLFGAPDVDARAVLAEMRGFAPQWMQGCAIRECWFEPTFHKHAKS
CCEECCCCCCCCCCCEEECCCCCHHHHHHHHHHCCCHHHHHCCHHHHHHCCCHHHHHHHH
LCSALMIHAEGAFYDHHAFRPWRLQALAFKAIRRLWPDYPIWRDFPYEYVFDKLAIDVIN
HHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHEEEC
GGPALREWVDDMGSEAGDLDSMAGADEAAWIEERQRFLLY
CCHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8011666; 9274029; 9384377 [H]