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The map label for this gene is apl [H]

Identifier: 87200096

GI number: 87200096

Start: 2218570

End: 2219169

Strand: Reverse

Name: apl [H]

Synonym: Saro_2080

Alternate gene names: 87200096

Gene position: 2219169-2218570 (Counterclockwise)

Preceding gene: 87200097

Following gene: 87200090

Centisome position: 62.31

GC content: 64.0

Gene sequence:

>600_bases
ATGAACGACTGGATCATCCACCTCATCGAAGGCGGTGGCTATTGGGGCATCGCCTTCCTGATGGTCATCGAGAACGTGTT
TCCGCCGATCCCGTCGGAGGTCATCATGGGCCTGGGCGGGATTGCGGTGGCGCGCGGGCGGATGGAGTTCTGGCCGCTGA
TGCTCGCGGGAACCGTGGGTTCGACCGCCGGAAACTATTGCTGGTACCTGCTCGGGCGGACGCTGGGCTATGAACGCCTG
AAGCCTTTCGTGAACCGCTTCGGCCGCTGGCTGACGGTGGAGTGGGACGACGTCGAGGCCATCGTCCGCTTCTTCCGGCG
CCACGGGCAGTGGGTGGTGTTCGCGGTGCGCTTTGCTCCGTTCATGCGCACGATGATCTCGCTTCCAGCCGGCCTGACGC
GAATGGGCCATGGGCGGTTCCTGCTGTTCACCTTCGCGGGAGCAGCGATCTGGAACGCGATCCTTGCCGGCGCAGGGTTC
TATCTCGGGCGCAACTTCGGCGATCTTGAAAAGTACACGGGGCCGGTGGCGACGGGCACGCTGGTCGTGGTGCTGATCGC
CTATGTGTGGCGCGTCATCGTATGGAAGCCCAGAGGCTGA

Upstream 100 bases:

>100_bases
GACGCGATCGAGGCCCGGCTCTAGTCCTGCGGCTTTTCCTTCGCCCGGCAGGTAACGACGCGGGTGGATCGAAAGAACCT
CGCGGCGCGTTGGCAGACCC

Downstream 100 bases:

>100_bases
ACGAAAAAAGCCCCCGCCGAGGCAGGGGCTTGATTCTTTGCCGTGGCGCGGGCCCGTGGCGTGGGCCTCAGGCGTCCTTG
GCCAGCCATTCCTCGAGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MNDWIIHLIEGGGYWGIAFLMVIENVFPPIPSEVIMGLGGIAVARGRMEFWPLMLAGTVGSTAGNYCWYLLGRTLGYERL
KPFVNRFGRWLTVEWDDVEAIVRFFRRHGQWVVFAVRFAPFMRTMISLPAGLTRMGHGRFLLFTFAGAAIWNAILAGAGF
YLGRNFGDLEKYTGPVATGTLVVVLIAYVWRVIVWKPRG

Sequences:

>Translated_199_residues
MNDWIIHLIEGGGYWGIAFLMVIENVFPPIPSEVIMGLGGIAVARGRMEFWPLMLAGTVGSTAGNYCWYLLGRTLGYERL
KPFVNRFGRWLTVEWDDVEAIVRFFRRHGQWVVFAVRFAPFMRTMISLPAGLTRMGHGRFLLFTFAGAAIWNAILAGAGF
YLGRNFGDLEKYTGPVATGTLVVVLIAYVWRVIVWKPRG
>Mature_199_residues
MNDWIIHLIEGGGYWGIAFLMVIENVFPPIPSEVIMGLGGIAVARGRMEFWPLMLAGTVGSTAGNYCWYLLGRTLGYERL
KPFVNRFGRWLTVEWDDVEAIVRFFRRHGQWVVFAVRFAPFMRTMISLPAGLTRMGHGRFLLFTFAGAAIWNAILAGAGF
YLGRNFGDLEKYTGPVATGTLVVVLIAYVWRVIVWKPRG

Specific function: Unknown

COG id: COG0586

COG function: function code S; Uncharacterized membrane-associated protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dedA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 22440; Mature: 22440

Theoretical pI: Translated: 10.29; Mature: 10.29

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNDWIIHLIEGGGYWGIAFLMVIENVFPPIPSEVIMGLGGIAVARGRMEFWPLMLAGTVG
CCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHCCCHHHHHHHHCCCCC
STAGNYCWYLLGRTLGYERLKPFVNRFGRWLTVEWDDVEAIVRFFRRHGQWVVFAVRFAP
CCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEEHHHHHH
FMRTMISLPAGLTRMGHGRFLLFTFAGAAIWNAILAGAGFYLGRNFGDLEKYTGPVATGT
HHHHHHHCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHCCCCHHHH
LVVVLIAYVWRVIVWKPRG
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MNDWIIHLIEGGGYWGIAFLMVIENVFPPIPSEVIMGLGGIAVARGRMEFWPLMLAGTVG
CCCEEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHCCCHHHHHCCCHHHHHHHHCCCCC
STAGNYCWYLLGRTLGYERLKPFVNRFGRWLTVEWDDVEAIVRFFRRHGQWVVFAVRFAP
CCCCHHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCCCEEEEHHHHHH
FMRTMISLPAGLTRMGHGRFLLFTFAGAAIWNAILAGAGFYLGRNFGDLEKYTGPVATGT
HHHHHHHCCCCHHHCCCCCEEEHHHHHHHHHHHHHHHCHHHHCCCCCCHHHHCCCCHHHH
LVVVLIAYVWRVIVWKPRG
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]