| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is gshB [H]
Identifier: 87200097
GI number: 87200097
Start: 2219246
End: 2220193
Strand: Reverse
Name: gshB [H]
Synonym: Saro_2081
Alternate gene names: 87200097
Gene position: 2220193-2219246 (Counterclockwise)
Preceding gene: 87200099
Following gene: 87200096
Centisome position: 62.34
GC content: 64.66
Gene sequence:
>948_bases ATGACACTTCGCGTCGCGGTCCAGATGGACCCGCTCCATTCGATCAACATCGCCGGCGATTCGAGCTTTGCGCTGATGCT TTCGGCGCAGGAGCGCGGACACGAGGTCTATCACTATGACGTCGGTTCGTTGTCGCTCGACGAGGACGACCGGTTGATCG CTCATGCGAACCCGGTGACGGTCCAGCGGATCGAGGGCAACCATTTCCAGACCGGCGAGCGCCGGCGACTCGACCTGGGG CGCGACATCGACGTGGTGCTGATGCGTCAGGACCCGCCGTTCCACATGGGCTACATCACGGCCACGCACCTGCTGGAGCG GATCGAGAGCGAGACGCTGGTGGTCAACAACCCGCGCAGCGTGCGCAACGCGCCCGAGAAGGTCATGGTGCTCGACTACC GGCGCTTCATGCCGCCGACGCTGGTCACGCGCTCGGTCGAGGAGGTGCGCAGCTTCCAGAAGAAGCACGGCGCCATCGTG ATCAAGCCGATTCACGGCAACGGCGGCAAGGCCATCTTCCGGGTGAGCGAGGAGGGCGAGAACCTTGGCGCGCTGTTCGA GGTGTTCAACCAGACCTGGCCCGAACCACACATGGTGCAGGCGTTCCTTCCCGAAGTGGCCAAGGGCGACAAGCGGATCG TGCTGGTCGACGGCGAGATCGCCGGCGCGATCAACCGCAAGCCGGGCGTGGGCGAGTTCCGCTCGAACCTCGCGGTCGGC GGCTATGCCGAAAAGACCGAACTGACGCAGGAGGAGCAGGAAATCTGCGCCGCGCTCGGGCCGGAGCTGAAGCGGCTTGG GCTGATCTTCGTCGGCATCGACGTGATCGGCGGCAAGTACCTGACCGAAATCAACGTGACTTCGCCGACGGGCATCGTCG CCATCGACAAGTTCAACGGCACCGATACGCCCGGGATGATCTGGGACGCGATCGAGGCCCGGCTCTAG
Upstream 100 bases:
>100_bases AAGGTGTGGCGCCATCGTGGCGCGGGGCGAAAATGGTCGCGCAGCCGGTAATTCGGCTTTAAGGCGCCGGTTAGAGAAAT ACCTGAGGCTGAGCACAAGC
Downstream 100 bases:
>100_bases TCCTGCGGCTTTTCCTTCGCCCGGCAGGTAACGACGCGGGTGGATCGAAAGAACCTCGCGGCGCGTTGGCAGACCCATGA ACGACTGGATCATCCACCTC
Product: glutathione synthetase
Products: NA
Alternate protein names: GSH synthetase; GSH-S; GSHase; Glutathione synthase [H]
Number of amino acids: Translated: 315; Mature: 314
Protein sequence:
>315_residues MTLRVAVQMDPLHSINIAGDSSFALMLSAQERGHEVYHYDVGSLSLDEDDRLIAHANPVTVQRIEGNHFQTGERRRLDLG RDIDVVLMRQDPPFHMGYITATHLLERIESETLVVNNPRSVRNAPEKVMVLDYRRFMPPTLVTRSVEEVRSFQKKHGAIV IKPIHGNGGKAIFRVSEEGENLGALFEVFNQTWPEPHMVQAFLPEVAKGDKRIVLVDGEIAGAINRKPGVGEFRSNLAVG GYAEKTELTQEEQEICAALGPELKRLGLIFVGIDVIGGKYLTEINVTSPTGIVAIDKFNGTDTPGMIWDAIEARL
Sequences:
>Translated_315_residues MTLRVAVQMDPLHSINIAGDSSFALMLSAQERGHEVYHYDVGSLSLDEDDRLIAHANPVTVQRIEGNHFQTGERRRLDLG RDIDVVLMRQDPPFHMGYITATHLLERIESETLVVNNPRSVRNAPEKVMVLDYRRFMPPTLVTRSVEEVRSFQKKHGAIV IKPIHGNGGKAIFRVSEEGENLGALFEVFNQTWPEPHMVQAFLPEVAKGDKRIVLVDGEIAGAINRKPGVGEFRSNLAVG GYAEKTELTQEEQEICAALGPELKRLGLIFVGIDVIGGKYLTEINVTSPTGIVAIDKFNGTDTPGMIWDAIEARL >Mature_314_residues TLRVAVQMDPLHSINIAGDSSFALMLSAQERGHEVYHYDVGSLSLDEDDRLIAHANPVTVQRIEGNHFQTGERRRLDLGR DIDVVLMRQDPPFHMGYITATHLLERIESETLVVNNPRSVRNAPEKVMVLDYRRFMPPTLVTRSVEEVRSFQKKHGAIVI KPIHGNGGKAIFRVSEEGENLGALFEVFNQTWPEPHMVQAFLPEVAKGDKRIVLVDGEIAGAINRKPGVGEFRSNLAVGG YAEKTELTQEEQEICAALGPELKRLGLIFVGIDVIGGKYLTEINVTSPTGIVAIDKFNGTDTPGMIWDAIEARL
Specific function: Glutathione biosynthesis; second step. [C]
COG id: COG0189
COG function: function code HJ; Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ATP-grasp domain [H]
Homologues:
Organism=Escherichia coli, GI1789316, Length=315, Percent_Identity=43.1746031746032, Blast_Score=243, Evalue=2e-65,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011761 - InterPro: IPR013815 - InterPro: IPR013816 - InterPro: IPR006284 - InterPro: IPR004218 - InterPro: IPR004215 - InterPro: IPR013817 - InterPro: IPR016185 [H]
Pfam domain/function: PF02955 GSH-S_ATP; PF02951 GSH-S_N [H]
EC number: =6.3.2.3 [H]
Molecular weight: Translated: 34971; Mature: 34839
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRVAVQMDPLHSINIAGDSSFALMLSAQERGHEVYHYDVGSLSLDEDDRLIAHANPVT CEEEEEEEECCCEEEEECCCCCEEEEEEEHHCCCEEEEEECCCEEECCCCCEEEECCCEE VQRIEGNHFQTGERRRLDLGRDIDVVLMRQDPPFHMGYITATHLLERIESETLVVNNPRS EEEECCCCCCCCCCEECCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCEEEEECCHH VRNAPEKVMVLDYRRFMPPTLVTRSVEEVRSFQKKHGAIVIKPIHGNGGKAIFRVSEEGE HCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCC NLGALFEVFNQTWPEPHMVQAFLPEVAKGDKRIVLVDGEIAGAINRKPGVGEFRSNLAVG CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCHHHHCCEEC GYAEKTELTQEEQEICAALGPELKRLGLIFVGIDVIGGKYLTEINVTSPTGIVAIDKFNG CCCHHHHHHHHHHHHHHHHCHHHHHCEEEEEEEEEECCEEEEEEEECCCCCEEEEECCCC TDTPGMIWDAIEARL CCCCCHHHHHHHHCC >Mature Secondary Structure TLRVAVQMDPLHSINIAGDSSFALMLSAQERGHEVYHYDVGSLSLDEDDRLIAHANPVT EEEEEEEECCCEEEEECCCCCEEEEEEEHHCCCEEEEEECCCEEECCCCCEEEECCCEE VQRIEGNHFQTGERRRLDLGRDIDVVLMRQDPPFHMGYITATHLLERIESETLVVNNPRS EEEECCCCCCCCCCEECCCCCCEEEEEEECCCCCEEHHHHHHHHHHHHCCCEEEEECCHH VRNAPEKVMVLDYRRFMPPTLVTRSVEEVRSFQKKHGAIVIKPIHGNGGKAIFRVSEEGE HCCCCCEEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEEEECCCCC NLGALFEVFNQTWPEPHMVQAFLPEVAKGDKRIVLVDGEIAGAINRKPGVGEFRSNLAVG CHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCEEEEECCCEECCCCCCCCCCHHHHCCEEC GYAEKTELTQEEQEICAALGPELKRLGLIFVGIDVIGGKYLTEINVTSPTGIVAIDKFNG CCCHHHHHHHHHHHHHHHHCHHHHHCEEEEEEEEEECCEEEEEEEECCCCCEEEEECCCC TDTPGMIWDAIEARL CCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA