Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87200060

Identifier: 87200060

GI number: 87200060

Start: 2181960

End: 2183027

Strand: Direct

Name: 87200060

Synonym: Saro_2044

Alternate gene names: NA

Gene position: 2181960-2183027 (Clockwise)

Preceding gene: 87200059

Following gene: 87200067

Centisome position: 61.26

GC content: 62.36

Gene sequence:

>1068_bases
TTGCTCCGCTTCTACAAGGGTTCGATCCTCTTCACGCTCGTATGCCTTGCACTGGCGGTGGCCTATGGCTGGATGCAGAC
CGGGACCGCGTCGGGCACGATGTCGCTGGTATGGATCGTGTTCGTGCTGTCGATCCTCGAAATCTCGCTGTCGTTCGACA
ACGCCGTGGTCAACGCCGCCGTGCTGGAGGACATGGACGAAGTCTGGCAGAAGCGCTTCCTCACCTGGGGCATGGTGATC
GCCGTGTTCGGGATGCGGATCGTCTTCCCGTTGGCGATCGTGGCGATTGCCGCAGGGTTAGGCCCGATCGAGGCACTGAA
CCTCTCGCTGAAGGACCCGAAGCGCTACGAGGAGATCGTCAGCAGCGCCCACGTCGGCATTGCCGGCTTCGGCGGAGCCT
TCCTGGCGATGGTCGGGCTTTCGTTCTTCTTCGACGGAGAGAAGGAAGTCCACTGGATCAAGTGGGTGGAGGAAAAGCTC
GCCGTCGTCTCGAACATAAAGGCCGCAGAGATCGCGCTGCTGCTCCTGTCGATCTATGGCATCTCGCTGATCCTTCCGCC
GGAGGAAGCGCTGACGTTCGTCGTCGCGGGCGTTCTCGGCCTCGTCACGTTCATCGCGGTCGAAGCGCTCGGCACGATCC
TTGAAATGCGCGAGGAAGCGCAGAAGGCGGCGGGCGTGGTGGTTCGCTCGGGCCTGGGCGGTTTCCTCTACCTCAACGTG
CTCGACGCCTCGTTCAGCTTCGACGGCGTGATCGGCGCCTTCGCGCTTTCCAACAACATGGTGATCATCGCTCTCGGCCT
TTCGATCGGTGCGATGTTCGTCCGCTCGATGACGATCATGCTGGTCCAGAAGGGCACGCTCTCGGAGTATCGCTACCTCG
AACACGGCGCATTCTGGGCGATCATCGCGCTCGGTGCGATCATGCTGCTGTCGGCGCGCTACCACATCCCCGAAACGGTC
ACGGGTCTGATCGGTGCGGCGCTGATCGGCCTATCGCTGTGGTGGTCGATCCGCCACAAGCGCAAGTACCCCGATGCCGA
ACTGGACGCCGCCGTAAGGGCCGACTGA

Upstream 100 bases:

>100_bases
CAGACGTACCAGCCCAAGTAACCGTCACGCCGAGGTAACCGTCACGGCCAGGCCATCGTCACACCTCGGCCGGCACACCA
AGACAGACAGGGAATTCCGC

Downstream 100 bases:

>100_bases
CTTCAGCCGCCCTCGCGCGCGGCCAGCGAGGGCTGCGGCGCCGGCGTTCCGAGAAAGCGGGGCGCGGGCGCGGGCATGAC
CATGCCGCCGTCCTCGACGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 355; Mature: 355

Protein sequence:

>355_residues
MLRFYKGSILFTLVCLALAVAYGWMQTGTASGTMSLVWIVFVLSILEISLSFDNAVVNAAVLEDMDEVWQKRFLTWGMVI
AVFGMRIVFPLAIVAIAAGLGPIEALNLSLKDPKRYEEIVSSAHVGIAGFGGAFLAMVGLSFFFDGEKEVHWIKWVEEKL
AVVSNIKAAEIALLLLSIYGISLILPPEEALTFVVAGVLGLVTFIAVEALGTILEMREEAQKAAGVVVRSGLGGFLYLNV
LDASFSFDGVIGAFALSNNMVIIALGLSIGAMFVRSMTIMLVQKGTLSEYRYLEHGAFWAIIALGAIMLLSARYHIPETV
TGLIGAALIGLSLWWSIRHKRKYPDAELDAAVRAD

Sequences:

>Translated_355_residues
MLRFYKGSILFTLVCLALAVAYGWMQTGTASGTMSLVWIVFVLSILEISLSFDNAVVNAAVLEDMDEVWQKRFLTWGMVI
AVFGMRIVFPLAIVAIAAGLGPIEALNLSLKDPKRYEEIVSSAHVGIAGFGGAFLAMVGLSFFFDGEKEVHWIKWVEEKL
AVVSNIKAAEIALLLLSIYGISLILPPEEALTFVVAGVLGLVTFIAVEALGTILEMREEAQKAAGVVVRSGLGGFLYLNV
LDASFSFDGVIGAFALSNNMVIIALGLSIGAMFVRSMTIMLVQKGTLSEYRYLEHGAFWAIIALGAIMLLSARYHIPETV
TGLIGAALIGLSLWWSIRHKRKYPDAELDAAVRAD
>Mature_355_residues
MLRFYKGSILFTLVCLALAVAYGWMQTGTASGTMSLVWIVFVLSILEISLSFDNAVVNAAVLEDMDEVWQKRFLTWGMVI
AVFGMRIVFPLAIVAIAAGLGPIEALNLSLKDPKRYEEIVSSAHVGIAGFGGAFLAMVGLSFFFDGEKEVHWIKWVEEKL
AVVSNIKAAEIALLLLSIYGISLILPPEEALTFVVAGVLGLVTFIAVEALGTILEMREEAQKAAGVVVRSGLGGFLYLNV
LDASFSFDGVIGAFALSNNMVIIALGLSIGAMFVRSMTIMLVQKGTLSEYRYLEHGAFWAIIALGAIMLLSARYHIPETV
TGLIGAALIGLSLWWSIRHKRKYPDAELDAAVRAD

Specific function: Unknown

COG id: COG2899

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38445; Mature: 38445

Theoretical pI: Translated: 5.16; Mature: 5.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRFYKGSILFTLVCLALAVAYGWMQTGTASGTMSLVWIVFVLSILEISLSFDNAVVNAA
CCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VLEDMDEVWQKRFLTWGMVIAVFGMRIVFPLAIVAIAAGLGPIEALNLSLKDPKRYEEIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHH
SSAHVGIAGFGGAFLAMVGLSFFFDGEKEVHWIKWVEEKLAVVSNIKAAEIALLLLSIYG
HHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
ISLILPPEEALTFVVAGVLGLVTFIAVEALGTILEMREEAQKAAGVVVRSGLGGFLYLNV
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
LDASFSFDGVIGAFALSNNMVIIALGLSIGAMFVRSMTIMLVQKGTLSEYRYLEHGAFWA
HHCCCCCCHHHHHHEECCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHH
IIALGAIMLLSARYHIPETVTGLIGAALIGLSLWWSIRHKRKYPDAELDAAVRAD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCHHHCCC
>Mature Secondary Structure
MLRFYKGSILFTLVCLALAVAYGWMQTGTASGTMSLVWIVFVLSILEISLSFDNAVVNAA
CCEEECHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHH
VLEDMDEVWQKRFLTWGMVIAVFGMRIVFPLAIVAIAAGLGPIEALNLSLKDPKRYEEIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHH
SSAHVGIAGFGGAFLAMVGLSFFFDGEKEVHWIKWVEEKLAVVSNIKAAEIALLLLSIYG
HHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC
ISLILPPEEALTFVVAGVLGLVTFIAVEALGTILEMREEAQKAAGVVVRSGLGGFLYLNV
CEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
LDASFSFDGVIGAFALSNNMVIIALGLSIGAMFVRSMTIMLVQKGTLSEYRYLEHGAFWA
HHCCCCCCHHHHHHEECCCEEEEEEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHH
IIALGAIMLLSARYHIPETVTGLIGAALIGLSLWWSIRHKRKYPDAELDAAVRAD
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA