| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is folE [H]
Identifier: 87200023
GI number: 87200023
Start: 2140974
End: 2141588
Strand: Reverse
Name: folE [H]
Synonym: Saro_2007
Alternate gene names: 87200023
Gene position: 2141588-2140974 (Counterclockwise)
Preceding gene: 87200024
Following gene: 87200022
Centisome position: 60.13
GC content: 65.85
Gene sequence:
>615_bases ATGAGCAGTCTGGTTGGGCCCGACGAGGACGATGATCTGGCCCGGGGCAAGGTGCCCGTGCCCCAGGACGTGCAGGACGC GATCCGCACGCTGATCCGCTGGTCCGGCGACGATCCGGAGCGTGAAGGCCTGCTCGACACGCCCAAGCGCGTGGCGCGGG CGTGGAAGGAATACTGCCAGGGCTATGGCGAGGACCCGGCGGTCCATCTTTCGCGCCAGTTCGAGGAAGTGGGCGGCTAC GACGAGATCGTGCTGCTGAAGGACATTCCGTTCCAGTCGCACTGCGAACACCACATGGCGCCGATCATCGGCAAGGCGGC GATTGCCTATCTGCCGCGCGACAAGGTGGTCGGCATCTCGAAGCTGGCGCGGGTGCTGCATGGCTTTGCGCGTCGCCTGC AGATTCAGGAACGGCTTACGGCAGAGGTCGCCCAGTGCATCTGGGACAACCTGCGGCCGCATGGCGTTGCGGTGGTAATC GAGGCACAGCACGCGTGCATGACCGCGCGCGGTGTGCGGACGCCCGGCGTCGGCATGGTGACGAGCCGCCTGATGGGCAC GTTCCTCGACGACAACCGCAGCCGCAAGGAAGTGCTGAGCTTGATGGGCTATTGA
Upstream 100 bases:
>100_bases GATCCCGAGCGGCCGGAGGAGATGCTGTCCTTCTACCGCCGGGGCCTGTTCAAGAGCCGCATCCTGCGGCGGCCGATGCG CTGAAGGACGAAGGAAAGCG
Downstream 100 bases:
>100_bases TGGGCCGTTGCCGGGTCTCGGAAAACAAACGTTACAATTCCGCATCTTGGCGGGACAATTGGGGTGCTTAGGTGAGTAGT GTCACCAGCCGAAAAAGGCT
Product: GTP cyclohydrolase
Products: NA
Alternate protein names: GTP cyclohydrolase I; GTP-CH-I [H]
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MSSLVGPDEDDDLARGKVPVPQDVQDAIRTLIRWSGDDPEREGLLDTPKRVARAWKEYCQGYGEDPAVHLSRQFEEVGGY DEIVLLKDIPFQSHCEHHMAPIIGKAAIAYLPRDKVVGISKLARVLHGFARRLQIQERLTAEVAQCIWDNLRPHGVAVVI EAQHACMTARGVRTPGVGMVTSRLMGTFLDDNRSRKEVLSLMGY
Sequences:
>Translated_204_residues MSSLVGPDEDDDLARGKVPVPQDVQDAIRTLIRWSGDDPEREGLLDTPKRVARAWKEYCQGYGEDPAVHLSRQFEEVGGY DEIVLLKDIPFQSHCEHHMAPIIGKAAIAYLPRDKVVGISKLARVLHGFARRLQIQERLTAEVAQCIWDNLRPHGVAVVI EAQHACMTARGVRTPGVGMVTSRLMGTFLDDNRSRKEVLSLMGY >Mature_203_residues SSLVGPDEDDDLARGKVPVPQDVQDAIRTLIRWSGDDPEREGLLDTPKRVARAWKEYCQGYGEDPAVHLSRQFEEVGGYD EIVLLKDIPFQSHCEHHMAPIIGKAAIAYLPRDKVVGISKLARVLHGFARRLQIQERLTAEVAQCIWDNLRPHGVAVVIE AQHACMTARGVRTPGVGMVTSRLMGTFLDDNRSRKEVLSLMGY
Specific function: Tetrahydrofolate biosynthesis; first step. [C]
COG id: COG0302
COG function: function code H; GTP cyclohydrolase I
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP cyclohydrolase I family [H]
Homologues:
Organism=Homo sapiens, GI66932968, Length=196, Percent_Identity=42.3469387755102, Blast_Score=157, Evalue=6e-39, Organism=Homo sapiens, GI4503949, Length=196, Percent_Identity=42.3469387755102, Blast_Score=157, Evalue=6e-39, Organism=Homo sapiens, GI66932970, Length=166, Percent_Identity=40.9638554216867, Blast_Score=124, Evalue=4e-29, Organism=Homo sapiens, GI66932972, Length=159, Percent_Identity=42.7672955974843, Blast_Score=123, Evalue=1e-28, Organism=Escherichia coli, GI1788476, Length=161, Percent_Identity=38.5093167701863, Blast_Score=112, Evalue=2e-26, Organism=Caenorhabditis elegans, GI17560486, Length=179, Percent_Identity=44.1340782122905, Blast_Score=162, Evalue=8e-41, Organism=Saccharomyces cerevisiae, GI6321706, Length=184, Percent_Identity=45.1086956521739, Blast_Score=164, Evalue=8e-42, Organism=Drosophila melanogaster, GI24656782, Length=182, Percent_Identity=42.8571428571429, Blast_Score=144, Evalue=3e-35, Organism=Drosophila melanogaster, GI24656796, Length=182, Percent_Identity=42.8571428571429, Blast_Score=144, Evalue=5e-35, Organism=Drosophila melanogaster, GI24656791, Length=182, Percent_Identity=42.8571428571429, Blast_Score=144, Evalue=6e-35,
Paralogues:
None
Copy number: 420 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001474 - InterPro: IPR020602 - InterPro: IPR018234 [H]
Pfam domain/function: PF01227 GTP_cyclohydroI [H]
EC number: =3.5.4.16 [H]
Molecular weight: Translated: 22782; Mature: 22651
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: PS00859 GTP_CYCLOHYDROL_1_1 ; PS00860 GTP_CYCLOHYDROL_1_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLVGPDEDDDLARGKVPVPQDVQDAIRTLIRWSGDDPEREGLLDTPKRVARAWKEYCQ CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH GYGEDPAVHLSRQFEEVGGYDEIVLLKDIPFQSHCEHHMAPIIGKAAIAYLPRDKVVGIS CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCHH KLARVLHGFARRLQIQERLTAEVAQCIWDNLRPHGVAVVIEAQHACMTARGVRTPGVGMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCHHHH TSRLMGTFLDDNRSRKEVLSLMGY HHHHHHHHHCCCCCHHHHHHHHCC >Mature Secondary Structure SSLVGPDEDDDLARGKVPVPQDVQDAIRTLIRWSGDDPEREGLLDTPKRVARAWKEYCQ CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHH GYGEDPAVHLSRQFEEVGGYDEIVLLKDIPFQSHCEHHMAPIIGKAAIAYLPRDKVVGIS CCCCCHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCHH KLARVLHGFARRLQIQERLTAEVAQCIWDNLRPHGVAVVIEAQHACMTARGVRTPGVGMV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECHHHHHHHCCCCCCCHHHH TSRLMGTFLDDNRSRKEVLSLMGY HHHHHHHHHCCCCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]