| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is suhB [C]
Identifier: 87200011
GI number: 87200011
Start: 2125098
End: 2125907
Strand: Direct
Name: suhB [C]
Synonym: Saro_1995
Alternate gene names: 87200011
Gene position: 2125098-2125907 (Clockwise)
Preceding gene: 87200010
Following gene: 87200020
Centisome position: 59.67
GC content: 66.91
Gene sequence:
>810_bases ATGGCAGAAACAGCTCTCGACGAAGCCGTCGCCGCGCTCATGCGTGACACCGCGCAGCGCACGCTTCTGAAGCACTATCA GCAGCTTGCCGACCATCACGTGACCGCCAAGGCCGCCGACGACGTGGTCACCATCGCCGATACGGAAAGCGAGGCCATGC TGGCCGAAGGGCTCGCCCGCATCCTTCCGGAAGCCGCCATCGTCGGGGAAGAAGCCGCCCACGCCGATGCGTCGGTGCTC GAGCACCTGTCCGACAGTCTGTGCTGGATCATCGACCCGCTTGACGGCACCAACAATTTCGCCGTGGGCAAGCCGCCCTT CGGCATCCTGCTTGCGCTGGCCGAAAAAGGCGAGACCGTGGCCGGGTGGATCTACGATCCGTTGACGGGCCGCCTGTGCA CGGCCCATCGCGGCAAGGGGGCATGGCTGAACGGCGAGCGCTTCACCGCGCGTCCCAGCGGCCAAGAACCGCCCATCGCG GCGATTTCTCTGGTCTTCGTGGATCAGGAGAAGCGAGCGGCGCTGCTGGAGCATATCGCCCCGCATTATGCCCTGGTCGA CATTCCGCGCTGCGCCGCCGAGCAATACCCGCGCATTGCCCTTGGCATCAACGACGTGTCGGTGTTCGAACGGACCCTGG CGTGGGACCACGCCGCCGGTGTCCTGTTTCTCAACGAGTCCGGTGGAAAGGCCGCGCGCCCTGACGGGTCGCCCTACCGG GTCGACCGCCATCTCGAGCCCGGCCTCATCGGCGCGGCCAGCCCGGCGCTGTTCGACGCGCTGGCCGAGCGGATGTCACT GATCGGCTGA
Upstream 100 bases:
>100_bases AGCGCCCCGACCTGCCACACCTAGCGGACTGGTACGCACGCCTGCGCACCCGGCCCGGCTACGCCAGCCAGGTCATGATC CCGCTCATCTGAGGTTCGAC
Downstream 100 bases:
>100_bases GGTCGCCCGTCGCCCGACCGAGGCCCCCGCCATGGCGAGGGCACTGCGGCATGGGCTCAGAGAACGCTTTCCAGCCAGCC CTTGAGCTGGCTCTTCGGCG
Product: inositol monophosphatase
Products: NA
Alternate protein names: I-1-Pase; IMPase; Inositol-1-phosphatase [H]
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MAETALDEAVAALMRDTAQRTLLKHYQQLADHHVTAKAADDVVTIADTESEAMLAEGLARILPEAAIVGEEAAHADASVL EHLSDSLCWIIDPLDGTNNFAVGKPPFGILLALAEKGETVAGWIYDPLTGRLCTAHRGKGAWLNGERFTARPSGQEPPIA AISLVFVDQEKRAALLEHIAPHYALVDIPRCAAEQYPRIALGINDVSVFERTLAWDHAAGVLFLNESGGKAARPDGSPYR VDRHLEPGLIGAASPALFDALAERMSLIG
Sequences:
>Translated_269_residues MAETALDEAVAALMRDTAQRTLLKHYQQLADHHVTAKAADDVVTIADTESEAMLAEGLARILPEAAIVGEEAAHADASVL EHLSDSLCWIIDPLDGTNNFAVGKPPFGILLALAEKGETVAGWIYDPLTGRLCTAHRGKGAWLNGERFTARPSGQEPPIA AISLVFVDQEKRAALLEHIAPHYALVDIPRCAAEQYPRIALGINDVSVFERTLAWDHAAGVLFLNESGGKAARPDGSPYR VDRHLEPGLIGAASPALFDALAERMSLIG >Mature_268_residues AETALDEAVAALMRDTAQRTLLKHYQQLADHHVTAKAADDVVTIADTESEAMLAEGLARILPEAAIVGEEAAHADASVLE HLSDSLCWIIDPLDGTNNFAVGKPPFGILLALAEKGETVAGWIYDPLTGRLCTAHRGKGAWLNGERFTARPSGQEPPIAA ISLVFVDQEKRAALLEHIAPHYALVDIPRCAAEQYPRIALGINDVSVFERTLAWDHAAGVLFLNESGGKAARPDGSPYRV DRHLEPGLIGAASPALFDALAERMSLIG
Specific function: Unknown
COG id: COG0483
COG function: function code G; Archaeal fructose-1,6-bisphosphatase and related enzymes of inositol monophosphatase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI7657236, Length=223, Percent_Identity=29.5964125560538, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI5031789, Length=240, Percent_Identity=24.5833333333333, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI221625487, Length=240, Percent_Identity=24.5833333333333, Blast_Score=76, Evalue=3e-14, Organism=Homo sapiens, GI221625507, Length=108, Percent_Identity=34.2592592592593, Blast_Score=73, Evalue=2e-13, Organism=Escherichia coli, GI1788882, Length=251, Percent_Identity=30.6772908366534, Blast_Score=94, Evalue=1e-20, Organism=Escherichia coli, GI1790659, Length=202, Percent_Identity=27.2277227722772, Blast_Score=62, Evalue=4e-11, Organism=Caenorhabditis elegans, GI193202572, Length=220, Percent_Identity=31.3636363636364, Blast_Score=92, Evalue=4e-19, Organism=Caenorhabditis elegans, GI193202570, Length=223, Percent_Identity=30.4932735426009, Blast_Score=85, Evalue=5e-17, Organism=Saccharomyces cerevisiae, GI6320493, Length=205, Percent_Identity=28.2926829268293, Blast_Score=68, Evalue=1e-12, Organism=Drosophila melanogaster, GI24664926, Length=241, Percent_Identity=33.6099585062241, Blast_Score=114, Evalue=7e-26, Organism=Drosophila melanogaster, GI24664922, Length=266, Percent_Identity=31.203007518797, Blast_Score=110, Evalue=1e-24, Organism=Drosophila melanogaster, GI21357957, Length=246, Percent_Identity=29.6747967479675, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI21357329, Length=265, Percent_Identity=30.188679245283, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI24664918, Length=222, Percent_Identity=28.8288288288288, Blast_Score=97, Evalue=1e-20, Organism=Drosophila melanogaster, GI21357303, Length=216, Percent_Identity=30.0925925925926, Blast_Score=81, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 - InterPro: IPR022337 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.25 [H]
Molecular weight: Translated: 28779; Mature: 28648
Theoretical pI: Translated: 4.73; Mature: 4.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAETALDEAVAALMRDTAQRTLLKHYQQLADHHVTAKAADDVVTIADTESEAMLAEGLAR CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHH ILPEAAIVGEEAAHADASVLEHLSDSLCWIIDPLDGTNNFAVGKPPFGILLALAEKGETV HCCHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHEEEEHHCCCEE AGWIYDPLTGRLCTAHRGKGAWLNGERFTARPSGQEPPIAAISLVFVDQEKRAALLEHIA EEEEECCCCCCEEECCCCCCCEECCCEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHC PHYALVDIPRCAAEQYPRIALGINDVSVFERTLAWDHAAGVLFLNESGGKAARPDGSPYR CCCEEEECCHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEE VDRHLEPGLIGAASPALFDALAERMSLIG ECCCCCCCCCCCCCHHHHHHHHHHHHHCC >Mature Secondary Structure AETALDEAVAALMRDTAQRTLLKHYQQLADHHVTAKAADDVVTIADTESEAMLAEGLAR CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEECCCHHHHHHHHHHH ILPEAAIVGEEAAHADASVLEHLSDSLCWIIDPLDGTNNFAVGKPPFGILLALAEKGETV HCCHHHHHCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCHHHEEEEHHCCCEE AGWIYDPLTGRLCTAHRGKGAWLNGERFTARPSGQEPPIAAISLVFVDQEKRAALLEHIA EEEEECCCCCCEEECCCCCCCEECCCEEECCCCCCCCCCEEEEEEEECCHHHHHHHHHHC PHYALVDIPRCAAEQYPRIALGINDVSVFERTLAWDHAAGVLFLNESGGKAARPDGSPYR CCCEEEECCHHHHHHCCEEEEECCHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCEE VDRHLEPGLIGAASPALFDALAERMSLIG ECCCCCCCCCCCCCHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10952301 [H]