| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is yliJ [H]
Identifier: 87200010
GI number: 87200010
Start: 2124484
End: 2125089
Strand: Direct
Name: yliJ [H]
Synonym: Saro_1994
Alternate gene names: 87200010
Gene position: 2124484-2125089 (Clockwise)
Preceding gene: 87200009
Following gene: 87200011
Centisome position: 59.65
GC content: 63.7
Gene sequence:
>606_bases GTGATCACACTCTGGGGCCGCCTGAACTCGCACAACGTGAAGAAGGTGGCGTGGGCGCTGATCGAGATGGACCTGCCCCA TCAGCGCCGCGATATCGGCGGTCAGTTCGGTTATACTACGGATTATCTTGCAAAAAATCCTAATCGCATGGTCCCGATGA TCGAGGAGGGCGAACTGGCGTTGTGGGAATCCAACGCCATCCTGCGCTATCTCGCGGATCGCCACGCGCCCGCATTCCGC AGCGACGACCCGGTCGTTCGCGCGCAGGGCGACAAGTGGATGGATTGGCAGTTCCATTTCGCCGATGCGCAGCGCGATGC CTTTCTCGGATGCGTGCGGCACGGAAAGGACGCGAGCGATCCTGCAGTCGCCACGTCTGCCACCGCCGCCGCCGGGATGA TGGCGATCCTCGACGAGGAACTCGCCCGTCGTCCGTGGCTGTCCGGTGACCGCTTCGGCATCGCGGATATCCCGATGGGC GTCTATGCCCACACCTACCATTCGTTGCCGATCGAGCGCCCCGACCTGCCACACCTAGCGGACTGGTACGCACGCCTGCG CACCCGGCCCGGCTACGCCAGCCAGGTCATGATCCCGCTCATCTGA
Upstream 100 bases:
>100_bases CTCGGCCTCGGCGATGGCAGGGCGACGGTCTGGACCTGCGACCTGACGCACGGCTACATCTCGATCAACGCCGACTATCG CAGTTGAAAAGGCCCTCGCC
Downstream 100 bases:
>100_bases GGTTCGACATGGCAGAAACAGCTCTCGACGAAGCCGTCGCCGCGCTCATGCGTGACACCGCGCAGCGCACGCTTCTGAAG CACTATCAGCAGCTTGCCGA
Product: glutathione S-transferase-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MITLWGRLNSHNVKKVAWALIEMDLPHQRRDIGGQFGYTTDYLAKNPNRMVPMIEEGELALWESNAILRYLADRHAPAFR SDDPVVRAQGDKWMDWQFHFADAQRDAFLGCVRHGKDASDPAVATSATAAAGMMAILDEELARRPWLSGDRFGIADIPMG VYAHTYHSLPIERPDLPHLADWYARLRTRPGYASQVMIPLI
Sequences:
>Translated_201_residues MITLWGRLNSHNVKKVAWALIEMDLPHQRRDIGGQFGYTTDYLAKNPNRMVPMIEEGELALWESNAILRYLADRHAPAFR SDDPVVRAQGDKWMDWQFHFADAQRDAFLGCVRHGKDASDPAVATSATAAAGMMAILDEELARRPWLSGDRFGIADIPMG VYAHTYHSLPIERPDLPHLADWYARLRTRPGYASQVMIPLI >Mature_201_residues MITLWGRLNSHNVKKVAWALIEMDLPHQRRDIGGQFGYTTDYLAKNPNRMVPMIEEGELALWESNAILRYLADRHAPAFR SDDPVVRAQGDKWMDWQFHFADAQRDAFLGCVRHGKDASDPAVATSATAAAGMMAILDEELARRPWLSGDRFGIADIPMG VYAHTYHSLPIERPDLPHLADWYARLRTRPGYASQVMIPLI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST N-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI87081789, Length=207, Percent_Identity=40.5797101449275, Blast_Score=141, Evalue=4e-35, Organism=Escherichia coli, GI1788640, Length=199, Percent_Identity=26.6331658291457, Blast_Score=65, Evalue=4e-12, Organism=Drosophila melanogaster, GI24654965, Length=203, Percent_Identity=29.064039408867, Blast_Score=80, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR004045 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C; PF02798 GST_N [H]
EC number: NA
Molecular weight: Translated: 22783; Mature: 22783
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITLWGRLNSHNVKKVAWALIEMDLPHQRRDIGGQFGYTTDYLAKNPNRMVPMIEEGELA CEEEEECCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCEEECCCEE LWESNAILRYLADRHAPAFRSDDPVVRAQGDKWMDWQFHFADAQRDAFLGCVRHGKDASD EEECCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHCCCCCCC PAVATSATAAAGMMAILDEELARRPWLSGDRFGIADIPMGVYAHTYHSLPIERPDLPHLA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHH DWYARLRTRPGYASQVMIPLI HHHHHHHCCCCCCCEEEEECC >Mature Secondary Structure MITLWGRLNSHNVKKVAWALIEMDLPHQRRDIGGQFGYTTDYLAKNPNRMVPMIEEGELA CEEEEECCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCHHHHCCCCCCCCEEECCCEE LWESNAILRYLADRHAPAFRSDDPVVRAQGDKWMDWQFHFADAQRDAFLGCVRHGKDASD EEECCHHHHHHHHHCCCCCCCCCCEEEECCCCEEEEEEEECCCCHHHHHHHHHCCCCCCC PAVATSATAAAGMMAILDEELARRPWLSGDRFGIADIPMGVYAHTYHSLPIERPDLPHLA CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCHHH DWYARLRTRPGYASQVMIPLI HHHHHHHCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]