| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199990
Identifier: 87199990
GI number: 87199990
Start: 2090151
End: 2090723
Strand: Reverse
Name: 87199990
Synonym: Saro_1973
Alternate gene names: NA
Gene position: 2090723-2090151 (Counterclockwise)
Preceding gene: 87199991
Following gene: 87199986
Centisome position: 58.7
GC content: 63.35
Gene sequence:
>573_bases ATGCCGACAACCGATCCGCGCATCGACGAGCATATCGCGAAGGCAGGTGCGTTTGCCCGGCCCGTGCTGGAGCGCTTCCG CGCTCTGGTTCATCGCCAGATTCCCGACTGTGTCGAGGCGATCAAGTGGGGCATGCCGCACTTCACGCTGGGCGGGAAGA ACGTGGCCGGGATGGCAGCGTTCAAGAAGCACGTTTCAGTGTTCTTCCACAACGACGATCAGCCAGGAGGAGCCGGGCCG TTTCGCAAGATTGCGGACATCGATGCCTTTCCGGATGAGGGGCTCGTGGTCGATAGGTTGAACGCTGCTGTGGCGCGCCT GTCGGCCTCCAAGGTCGCGAGATCCCGTGTGGCGACCAAACGGGTACCGTCGGTTCCCGAGGCATTCGCAGCCGCGCTCG ACACGGGCGGGGCGCGTAGCCGGTTCGACGGCATGGCGCCCGGGCAGCGCCGCGAATATATCGAATGGATCGTTGAGGCG AAGAGCGATGCCACGCGCGAAAAACGCATCGCGCAGGCCACCGAGTGGATTGCCGAGGGTAAGCCGCGCAACTGGAAGTA CAAGAAATCCTGA
Upstream 100 bases:
>100_bases ACGATGCGGCAAGTTTCATCCAGGCGGTGAAGAAGCTGATCGAAACGCCGGTGCTGCTGCTGGCGGACTGATGTGATATG AGCGCGGATCGGAGGTAGCC
Downstream 100 bases:
>100_bases GCCTCGCGGCAAGTTGTTCAAGAATTTTGCCGACGACGAAAAATGCATGCCGAAGTCCGTTGACAGCCTGCAAACTCTGC CATAGAGGCGGCGCTCCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 190; Mature: 189
Protein sequence:
>190_residues MPTTDPRIDEHIAKAGAFARPVLERFRALVHRQIPDCVEAIKWGMPHFTLGGKNVAGMAAFKKHVSVFFHNDDQPGGAGP FRKIADIDAFPDEGLVVDRLNAAVARLSASKVARSRVATKRVPSVPEAFAAALDTGGARSRFDGMAPGQRREYIEWIVEA KSDATREKRIAQATEWIAEGKPRNWKYKKS
Sequences:
>Translated_190_residues MPTTDPRIDEHIAKAGAFARPVLERFRALVHRQIPDCVEAIKWGMPHFTLGGKNVAGMAAFKKHVSVFFHNDDQPGGAGP FRKIADIDAFPDEGLVVDRLNAAVARLSASKVARSRVATKRVPSVPEAFAAALDTGGARSRFDGMAPGQRREYIEWIVEA KSDATREKRIAQATEWIAEGKPRNWKYKKS >Mature_189_residues PTTDPRIDEHIAKAGAFARPVLERFRALVHRQIPDCVEAIKWGMPHFTLGGKNVAGMAAFKKHVSVFFHNDDQPGGAGPF RKIADIDAFPDEGLVVDRLNAAVARLSASKVARSRVATKRVPSVPEAFAAALDTGGARSRFDGMAPGQRREYIEWIVEAK SDATREKRIAQATEWIAEGKPRNWKYKKS
Specific function: Unknown
COG id: COG4430
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20992; Mature: 20861
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTTDPRIDEHIAKAGAFARPVLERFRALVHRQIPDCVEAIKWGMPHFTLGGKNVAGMAA CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCHHHHHH FKKHVSVFFHNDDQPGGAGPFRKIADIDAFPDEGLVVDRLNAAVARLSASKVARSRVATK HHHHHEEEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RVPSVPEAFAAALDTGGARSRFDGMAPGQRREYIEWIVEAKSDATREKRIAQATEWIAEG HCCCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPRNWKYKKS CCCCCCCCCC >Mature Secondary Structure PTTDPRIDEHIAKAGAFARPVLERFRALVHRQIPDCVEAIKWGMPHFTLGGKNVAGMAA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCCCHHHHHH FKKHVSVFFHNDDQPGGAGPFRKIADIDAFPDEGLVVDRLNAAVARLSASKVARSRVATK HHHHHEEEECCCCCCCCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH RVPSVPEAFAAALDTGGARSRFDGMAPGQRREYIEWIVEAKSDATREKRIAQATEWIAEG HCCCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC KPRNWKYKKS CCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA