Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199930

Identifier: 87199930

GI number: 87199930

Start: 2025430

End: 2026017

Strand: Direct

Name: 87199930

Synonym: Saro_1913

Alternate gene names: NA

Gene position: 2025430-2026017 (Clockwise)

Preceding gene: 87199926

Following gene: 87199931

Centisome position: 56.87

GC content: 65.82

Gene sequence:

>588_bases
ATGCAGAATTTACCACGCGAGGACATCGACTGTTTGTCCCCGCCAGAACGACTGGCGCTGGCTTATGCGACGAGGCGCGG
GCGCGCCGCCTGGGAGGCCTTTTTCCTGTTCGAGCGTCGTCTTGCAGAGACAGCCCGCCCAGGTCGCGAACCATTGATGA
TACAACTGCGCCTGGCATGGTGGCGTGATCGTCTTGCCGAGCCGGTCGAGCGCTGGCCGGTCAGCGAACCCACGCTCGCC
CGGTTGCATGCGTGGGGTGAACATCGTTCGCACCTGTCCAGCCTTGTCGACGGATGGGAGGCGAGCGTCGTGGGCGAAGA
TGGAGGTGCGGCACTCTCGTCCGCGCGCGTGAACGCTTTTGCGGCGCTTGCCGCTCTCCTTGGCGAAACTTCGCTCGACG
ACGTCAGACGGGCCGCGCAGGATCTCGTGTCACCTTCCGAAGCAACGGCACGGTCGCCCCGGCTGTCGCGCGCGATGCGT
CCCCTTGCAGTGTTGCGCGCACTTGCCGTCCGGAGCGCGCAAGGCAGGCCCGCGACGCCCCTGGCCGATATGGCGCACGT
CATCCGCATCGGAATTCTGGGCAGATAG

Upstream 100 bases:

>100_bases
ACCCTGTGAGTCGTTCATAGTTTTGTCGTGGTTATTTCATCTTGAAGCCATCTGGTTGATCACACGTTAAAAGTTTCGCG
AATTTCGTAGGGGCGTCGTA

Downstream 100 bases:

>100_bases
CATCCGGCCAAATCGGAACGATCTGCGAGTGCCGCGCGGATCGCCAGAGCGCTAAGCTGCCCGAGTTTTGCGGAGGGTGC
TGAATGCTACGGGGTTTGCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MQNLPREDIDCLSPPERLALAYATRRGRAAWEAFFLFERRLAETARPGREPLMIQLRLAWWRDRLAEPVERWPVSEPTLA
RLHAWGEHRSHLSSLVDGWEASVVGEDGGAALSSARVNAFAALAALLGETSLDDVRRAAQDLVSPSEATARSPRLSRAMR
PLAVLRALAVRSAQGRPATPLADMAHVIRIGILGR

Sequences:

>Translated_195_residues
MQNLPREDIDCLSPPERLALAYATRRGRAAWEAFFLFERRLAETARPGREPLMIQLRLAWWRDRLAEPVERWPVSEPTLA
RLHAWGEHRSHLSSLVDGWEASVVGEDGGAALSSARVNAFAALAALLGETSLDDVRRAAQDLVSPSEATARSPRLSRAMR
PLAVLRALAVRSAQGRPATPLADMAHVIRIGILGR
>Mature_195_residues
MQNLPREDIDCLSPPERLALAYATRRGRAAWEAFFLFERRLAETARPGREPLMIQLRLAWWRDRLAEPVERWPVSEPTLA
RLHAWGEHRSHLSSLVDGWEASVVGEDGGAALSSARVNAFAALAALLGETSLDDVRRAAQDLVSPSEATARSPRLSRAMR
PLAVLRALAVRSAQGRPATPLADMAHVIRIGILGR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21525; Mature: 21525

Theoretical pI: Translated: 11.12; Mature: 11.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNLPREDIDCLSPPERLALAYATRRGRAAWEAFFLFERRLAETARPGREPLMIQLRLAW
CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
WRDRLAEPVERWPVSEPTLARLHAWGEHRSHLSSLVDGWEASVVGEDGGAALSSARVNAF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHH
AALAALLGETSLDDVRRAAQDLVSPSEATARSPRLSRAMRPLAVLRALAVRSAQGRPATP
HHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LADMAHVIRIGILGR
HHHHHHHHHHHCCCC
>Mature Secondary Structure
MQNLPREDIDCLSPPERLALAYATRRGRAAWEAFFLFERRLAETARPGREPLMIQLRLAW
CCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHH
WRDRLAEPVERWPVSEPTLARLHAWGEHRSHLSSLVDGWEASVVGEDGGAALSSARVNAF
HHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHEEECCCCCHHHHHHHHHHH
AALAALLGETSLDDVRRAAQDLVSPSEATARSPRLSRAMRPLAVLRALAVRSAQGRPATP
HHHHHHHCCCCHHHHHHHHHHHCCCCHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCC
LADMAHVIRIGILGR
HHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA