| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is nudG [C]
Identifier: 87199924
GI number: 87199924
Start: 2019395
End: 2019844
Strand: Direct
Name: nudG [C]
Synonym: Saro_1907
Alternate gene names: 87199924
Gene position: 2019395-2019844 (Clockwise)
Preceding gene: 87199921
Following gene: 87199925
Centisome position: 56.7
GC content: 59.78
Gene sequence:
>450_bases ATGGAAAAAAATTCGACAGTGATAGTGGTCGTGGCGGTTGCGCTGGTGGGACAAGGGCCAAGGGTGCTCATGCAGAAGCG TCCCGCAAACAAGGCGCATGGCGGGCTTTGGGAGTTCCCCGGCGGCAAGGTCGAGATGGGGGAAACGCCTGAATCCGCGC TTGTAAGAGAAACCGACGAGGAGCTGGGCGTGGCCCTCGAACCGGCCGATCTCGAACCACTTTCCTTTGCAACACAAGCT CTTGGTAGTGCCGGGGGCTCCATGGTCCTGCTGCTGTACCGGGCTCGCAAATGGCGCGGTGATCCAAAGGCGCTCGAACC GGACACGGAGGTGGCCTGGGTAGACTTCAGCGCGCTCCTGGACCTTCCAATGCCACCTCTGGACGTTCCTCTCGCAGCTT CTCTAATTCGTTCGATTGAAGGGGTTGCCAAAGCGGAAGGACCCTCCTAA
Upstream 100 bases:
>100_bases GATGATTTTGCGAAGAACGGACTTCATCGTCATTCCCAAGATTGCGGCACAATCGCTTCTATGGACAGATACCTAAGAAA AAGTTGACGGAATTTCCCGA
Downstream 100 bases:
>100_bases AGGCGCGTCTCCCGGCACCCGTAGCTCAGCTGGATAGAGCATCAGACTACGAATCTGAGGGTCGGACGTTCGAATCGTTC CGGGTGCGCCACTCCCCCTT
Product: NUDIX hydrolase
Products: NA
Alternate protein names: NUDIX Hydrolase; NTP Pyrophosphohydrolase; Mutator Protein MutT; CTP Pyrophosphohydrolase; Hydrolase NUDIX Family; 7 8-Dihydro-8-Oxoguanine Triphosphatase; 7 8-Dihydro-8-Oxoguanine-Triphosphatase; Nucleoside Triphosphate Pyrophosphohydrolase; NTP Pyrophosphohydrolase MutT Family; Acetyltransferase; Pyrophosphohydrolase; Mutator Mutt Protein; Thiamine Monophosphate Synthase; Bifunctional Acetyltransferase; NTP Pyrophosphohydrolase Protein
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MEKNSTVIVVVAVALVGQGPRVLMQKRPANKAHGGLWEFPGGKVEMGETPESALVRETDEELGVALEPADLEPLSFATQA LGSAGGSMVLLLYRARKWRGDPKALEPDTEVAWVDFSALLDLPMPPLDVPLAASLIRSIEGVAKAEGPS
Sequences:
>Translated_149_residues MEKNSTVIVVVAVALVGQGPRVLMQKRPANKAHGGLWEFPGGKVEMGETPESALVRETDEELGVALEPADLEPLSFATQA LGSAGGSMVLLLYRARKWRGDPKALEPDTEVAWVDFSALLDLPMPPLDVPLAASLIRSIEGVAKAEGPS >Mature_149_residues MEKNSTVIVVVAVALVGQGPRVLMQKRPANKAHGGLWEFPGGKVEMGETPESALVRETDEELGVALEPADLEPLSFATQA LGSAGGSMVLLLYRARKWRGDPKALEPDTEVAWVDFSALLDLPMPPLDVPLAASLIRSIEGVAKAEGPS
Specific function: Specific For Pyrimidine Substrates. Acts On 5-Methyl- Dctp, Ctp And Dctp In Decreasing Order. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788056, Length=124, Percent_Identity=32.258064516129, Blast_Score=62, Evalue=1e-11, Organism=Escherichia coli, GI1786288, Length=128, Percent_Identity=30.46875, Blast_Score=60, Evalue=8e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.6.1.-
Molecular weight: Translated: 15797; Mature: 15797
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00893 NUDIX
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKNSTVIVVVAVALVGQGPRVLMQKRPANKAHGGLWEFPGGKVEMGETPESALVRETDE CCCCCEEEEEEEHHHHCCCCHHHHCCCCCCCCCCCEEECCCCEEECCCCCHHHHHHCCHH ELGVALEPADLEPLSFATQALGSAGGSMVLLLYRARKWRGDPKALEPDTEVAWVDFSALL HCCEEECCCCCCHHHHHHHHHHCCCCHHHHHEEHHHHCCCCCCCCCCCCCEEEEEHHHHH DLPMPPLDVPLAASLIRSIEGVAKAEGPS CCCCCCCCCHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MEKNSTVIVVVAVALVGQGPRVLMQKRPANKAHGGLWEFPGGKVEMGETPESALVRETDE CCCCCEEEEEEEHHHHCCCCHHHHCCCCCCCCCCCEEECCCCEEECCCCCHHHHHHCCHH ELGVALEPADLEPLSFATQALGSAGGSMVLLLYRARKWRGDPKALEPDTEVAWVDFSALL HCCEEECCCCCCHHHHHHHHHHCCCCHHHHHEEHHHHCCCCCCCCCCCCCEEEEEHHHHH DLPMPPLDVPLAASLIRSIEGVAKAEGPS CCCCCCCCCHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe; Mn [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA