| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is paaG [H]
Identifier: 87199914
GI number: 87199914
Start: 2010219
End: 2011001
Strand: Direct
Name: paaG [H]
Synonym: Saro_1897
Alternate gene names: 87199914
Gene position: 2010219-2011001 (Clockwise)
Preceding gene: 87199913
Following gene: 87199915
Centisome position: 56.44
GC content: 65.52
Gene sequence:
>783_bases ATGGATTACGAAACCATTCTCGTCGAGCGGGTCGGCGATGTCCTGAAGATCACGCTGAACCGCCCCGAGCGCCTGAATGC ATGCCCGCCGAACATGGCGCTTGAACTGGCTAATGCGGTCAACGACCTTGACGGCGCGCGGGCCGTGCTGATCACGGGCC AGGGGCGGGCGTTCTGTTCGGGAGCCGATCTGGCGGCGCGTGGGGAGCGCTCCATTGCGGGCGGGCGAGGGGCCTATACC GCGCTGACGCAGGCCTACAACCCGCTCATGCTCGCTCTTTCGCGGTTGCCTGTGCCGGTTGTCACAGCGGTCAACGGTCC GGCCGCGGGCGTTGGGTGCTCGATTGCGCTGGCAGCCGACTTTGTCGTCGCGGCGCGTAGTGCCTACTTCCTCCAGGCAT TCGTGAACATCGGCCTCGTGCCGGATGGTGGCGCTTCGTGGATGCTGACGCGCCTGGTCGGCAAGGCCCGCGCGACCGAG ATGATGATGCTTGGCGAGAAGATCGGAGCCGAGAAGGCTGAAAACTGGGGCCTGATCTACAAGGCCGTCGACGATGCGGC GCTGATGGACGAGGCCATGGCCTTGGCCAGTCGTCTCGCTGCCGGCCCGACAGTCGCGCTTGGAACGATGCGGCAGAACC TCGCGAAGGCGCTGGAGGTCGACTATGCCAGCGCGCTTCTGGTCGAGGCAGAAGGGCAGTGGGCTGCTGGCGACAGTGCC GATGCGGCTGAGGGCGGCAAGGCATTCCTCGAAAAGCGCAAGGCGGCGTTCACAGGAAAGTAG
Upstream 100 bases:
>100_bases GCACTTTAATCGTGCAATTAAATTTTGGTGGATTCGCTCCGCCAAGACGGTATTGCTGTGCGCGAAGTGCGAAGGCGGTT GGCCAAGGAGAGGTTGCCAG
Downstream 100 bases:
>100_bases GCGGTTGATATCTGGGCGGTCAGGCCCACCTTGAGGCCATGACCGCCCGCACCATCTGGACCATAGGCTACGAGCAGGCG ACCGTTCCTGCCGTCATGGG
Product: enoyl-CoA hydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 260; Mature: 260
Protein sequence:
>260_residues MDYETILVERVGDVLKITLNRPERLNACPPNMALELANAVNDLDGARAVLITGQGRAFCSGADLAARGERSIAGGRGAYT ALTQAYNPLMLALSRLPVPVVTAVNGPAAGVGCSIALAADFVVAARSAYFLQAFVNIGLVPDGGASWMLTRLVGKARATE MMMLGEKIGAEKAENWGLIYKAVDDAALMDEAMALASRLAAGPTVALGTMRQNLAKALEVDYASALLVEAEGQWAAGDSA DAAEGGKAFLEKRKAAFTGK
Sequences:
>Translated_260_residues MDYETILVERVGDVLKITLNRPERLNACPPNMALELANAVNDLDGARAVLITGQGRAFCSGADLAARGERSIAGGRGAYT ALTQAYNPLMLALSRLPVPVVTAVNGPAAGVGCSIALAADFVVAARSAYFLQAFVNIGLVPDGGASWMLTRLVGKARATE MMMLGEKIGAEKAENWGLIYKAVDDAALMDEAMALASRLAAGPTVALGTMRQNLAKALEVDYASALLVEAEGQWAAGDSA DAAEGGKAFLEKRKAAFTGK >Mature_260_residues MDYETILVERVGDVLKITLNRPERLNACPPNMALELANAVNDLDGARAVLITGQGRAFCSGADLAARGERSIAGGRGAYT ALTQAYNPLMLALSRLPVPVVTAVNGPAAGVGCSIALAADFVVAARSAYFLQAFVNIGLVPDGGASWMLTRLVGKARATE MMMLGEKIGAEKAENWGLIYKAVDDAALMDEAMALASRLAAGPTVALGTMRQNLAKALEVDYASALLVEAEGQWAAGDSA DAAEGGKAFLEKRKAAFTGK
Specific function: Could possibly oxidize fatty acids using specific components [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the enoyl-CoA hydratase/isomerase family [H]
Homologues:
Organism=Homo sapiens, GI194097323, Length=262, Percent_Identity=31.2977099236641, Blast_Score=121, Evalue=8e-28, Organism=Homo sapiens, GI31542718, Length=252, Percent_Identity=30.1587301587302, Blast_Score=101, Evalue=5e-22, Organism=Homo sapiens, GI45643119, Length=246, Percent_Identity=26.0162601626016, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI260275230, Length=246, Percent_Identity=26.0162601626016, Blast_Score=89, Evalue=3e-18, Organism=Homo sapiens, GI260274832, Length=246, Percent_Identity=26.0162601626016, Blast_Score=89, Evalue=4e-18, Organism=Homo sapiens, GI116235487, Length=184, Percent_Identity=29.8913043478261, Blast_Score=88, Evalue=6e-18, Organism=Homo sapiens, GI221136756, Length=224, Percent_Identity=27.6785714285714, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI221136753, Length=224, Percent_Identity=27.6785714285714, Blast_Score=87, Evalue=2e-17, Organism=Homo sapiens, GI221307494, Length=224, Percent_Identity=27.6785714285714, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI4757968, Length=215, Percent_Identity=28.3720930232558, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI49355787, Length=215, Percent_Identity=28.3720930232558, Blast_Score=86, Evalue=2e-17, Organism=Homo sapiens, GI25453481, Length=208, Percent_Identity=28.3653846153846, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI51538573, Length=208, Percent_Identity=28.3653846153846, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI4757966, Length=208, Percent_Identity=28.3653846153846, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI51538581, Length=208, Percent_Identity=28.3653846153846, Blast_Score=86, Evalue=3e-17, Organism=Homo sapiens, GI70995211, Length=266, Percent_Identity=26.6917293233083, Blast_Score=75, Evalue=7e-14, Organism=Homo sapiens, GI4502327, Length=256, Percent_Identity=28.125, Blast_Score=66, Evalue=3e-11, Organism=Homo sapiens, GI37594471, Length=156, Percent_Identity=31.4102564102564, Blast_Score=65, Evalue=5e-11, Organism=Homo sapiens, GI37594469, Length=156, Percent_Identity=31.4102564102564, Blast_Score=65, Evalue=6e-11, Organism=Homo sapiens, GI213417737, Length=216, Percent_Identity=24.0740740740741, Blast_Score=65, Evalue=9e-11, Organism=Homo sapiens, GI157694516, Length=216, Percent_Identity=24.0740740740741, Blast_Score=64, Evalue=1e-10, Organism=Escherichia coli, GI1787660, Length=260, Percent_Identity=43.4615384615385, Blast_Score=182, Evalue=2e-47, Organism=Escherichia coli, GI221142681, Length=268, Percent_Identity=35.0746268656716, Blast_Score=122, Evalue=3e-29, Organism=Escherichia coli, GI1787659, Length=265, Percent_Identity=33.5849056603774, Blast_Score=121, Evalue=4e-29, Organism=Escherichia coli, GI1788597, Length=277, Percent_Identity=29.2418772563177, Blast_Score=84, Evalue=7e-18, Organism=Escherichia coli, GI87082183, Length=266, Percent_Identity=24.4360902255639, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1788682, Length=196, Percent_Identity=26.530612244898, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17554946, Length=263, Percent_Identity=31.9391634980989, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI25145438, Length=259, Percent_Identity=31.6602316602317, Blast_Score=109, Evalue=1e-24, Organism=Caenorhabditis elegans, GI17549921, Length=199, Percent_Identity=30.1507537688442, Blast_Score=99, Evalue=2e-21, Organism=Caenorhabditis elegans, GI17535521, Length=262, Percent_Identity=29.0076335877863, Blast_Score=97, Evalue=1e-20, Organism=Caenorhabditis elegans, GI17560910, Length=249, Percent_Identity=25.7028112449799, Blast_Score=91, Evalue=6e-19, Organism=Caenorhabditis elegans, GI17536985, Length=259, Percent_Identity=26.2548262548263, Blast_Score=90, Evalue=1e-18, Organism=Caenorhabditis elegans, GI17540714, Length=228, Percent_Identity=28.5087719298246, Blast_Score=74, Evalue=9e-14, Organism=Caenorhabditis elegans, GI17540306, Length=253, Percent_Identity=26.8774703557312, Blast_Score=71, Evalue=4e-13, Organism=Caenorhabditis elegans, GI17534483, Length=217, Percent_Identity=27.1889400921659, Blast_Score=68, Evalue=4e-12, Organism=Drosophila melanogaster, GI20129971, Length=266, Percent_Identity=32.7067669172932, Blast_Score=124, Evalue=7e-29, Organism=Drosophila melanogaster, GI24653477, Length=266, Percent_Identity=32.7067669172932, Blast_Score=124, Evalue=7e-29, Organism=Drosophila melanogaster, GI24654903, Length=188, Percent_Identity=31.9148936170213, Blast_Score=97, Evalue=7e-21, Organism=Drosophila melanogaster, GI24653139, Length=271, Percent_Identity=28.4132841328413, Blast_Score=87, Evalue=1e-17, Organism=Drosophila melanogaster, GI19922422, Length=252, Percent_Identity=26.1904761904762, Blast_Score=86, Evalue=3e-17, Organism=Drosophila melanogaster, GI19920382, Length=219, Percent_Identity=28.310502283105, Blast_Score=84, Evalue=7e-17, Organism=Drosophila melanogaster, GI21357171, Length=213, Percent_Identity=27.6995305164319, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001753 - InterPro: IPR011968 [H]
Pfam domain/function: PF00378 ECH [H]
EC number: =4.2.1.17 [H]
Molecular weight: Translated: 27032; Mature: 27032
Theoretical pI: Translated: 4.94; Mature: 4.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYETILVERVGDVLKITLNRPERLNACPPNMALELANAVNDLDGARAVLITGQGRAFCS CCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEC GADLAARGERSIAGGRGAYTALTQAYNPLMLALSRLPVPVVTAVNGPAAGVGCSIALAAD CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHH FVVAARSAYFLQAFVNIGLVPDGGASWMLTRLVGKARATEMMMLGEKIGAEKAENWGLIY HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE KAVDDAALMDEAMALASRLAAGPTVALGTMRQNLAKALEVDYASALLVEAEGQWAAGDSA EEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC DAAEGGKAFLEKRKAAFTGK CCCCCHHHHHHHHHHHCCCC >Mature Secondary Structure MDYETILVERVGDVLKITLNRPERLNACPPNMALELANAVNDLDGARAVLITGQGRAFCS CCHHHHHHHHHCCEEEEEECCCCCCCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCEEEC GADLAARGERSIAGGRGAYTALTQAYNPLMLALSRLPVPVVTAVNGPAAGVGCSIALAAD CCCHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHH FVVAARSAYFLQAFVNIGLVPDGGASWMLTRLVGKARATEMMMLGEKIGAEKAENWGLIY HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEE KAVDDAALMDEAMALASRLAAGPTVALGTMRQNLAKALEVDYASALLVEAEGQWAAGDSA EEHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCC DAAEGGKAFLEKRKAAFTGK CCCCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9748275; 9097039; 9278503; 10766858 [H]