| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is glk [H]
Identifier: 87199913
GI number: 87199913
Start: 2009128
End: 2010096
Strand: Direct
Name: glk [H]
Synonym: Saro_1896
Alternate gene names: 87199913
Gene position: 2009128-2010096 (Clockwise)
Preceding gene: 87199912
Following gene: 87199914
Centisome position: 56.41
GC content: 66.15
Gene sequence:
>969_bases ATGCAGGTAGTTGCCGTCGATATTGGCGGAACCCACGCCCGCTTCGCGATTGCCGAAGTCGCGGAAGGCCGCGTGGTCTC GCTTGGCGAGGCCGTTACGCTCAAGACGGCGGAGCATGGCTCGTTCCAGCTTGCCTGGGAGGATTTCGAGCGCGTTCGTG GAGAGCCATTGCCCAAGGCCGCGGCTATTGCCGTCGCCGGGCCTGTCGGCGGCGAGATCATCAAGTTCACGAACAATCCG TGGATCATCCGCCCGGCGTTGATCCCGGAGAAGCTGGGGGCGGAGCAATATGTCGTCGTCAACGACTTCGCCGCCGTGGC CCATGCTGTCGCGCAGGCGGACCAGAGCCACTTTCTACACCTGAGCGGCCCGGACGAACCGCTGCCCGCCAGCGGCGTGA CCAGCGTGGTCGGACCAGGGACAGGGCTCGGCGTGGCGCAGTTGTGGCGTGACGGGAACAACTACCGGGTCCAGCCCACC GAAGGCGGGCACATCGACTTCGCGCCGCTAGATTCGATCGAGGACGCGATCCTTGCCGGTCTGCGCAAGCGCCACCGCCG CGTTTCGGCGGAACGCGTCGTGGCCGGGCCGGGCATCGTCGATATCTACGAGGCGCTTGCTCTGATCGAAGGACGACCGT TTACACCCCGGTCTGACCGCGAGTTGTGGGAACTCGGGACTTCCGGAGCGGACAGCCTTGCCGCCGCTGCAGTAGACAGG TTCTGCCTCTCGCTCGGCAGCGTGGCAGGCGATCTTGCCCTGGCTCACGGCGCCAACGGCGTCGTCATGGCCGGCGGGCT TGGCCTGCGGATCAAGGACACGCTGGTTCGGTCTGGCTTCTCGGACAGGTTCAGGGCAAAAGGGCGGTTCGAGGCCCTCA TGGCGGCCATTCCGGTCAAGCTGATCACGCATCCGCAGCCCGGCCTGTTCGGTGCGGCAGCGGCCTTTGCGCAAGCGCAT ACGTCGTGA
Upstream 100 bases:
>100_bases ATTCCGATCCCGCCGAGCGCGGCGGATCGGCGATGCTCGCGGCGGCGGGGCTCTGAAGGATATATCCATCCGGCTGACAG AGGCCGATCTGGGGGACAGG
Downstream 100 bases:
>100_bases ACCTCGCGGGTCGGCCCGCCTAGCACTTTAATCGTGCAATTAAATTTTGGTGGATTCGCTCCGCCAAGACGGTATTGCTG TGCGCGAAGTGCGAAGGCGG
Product: glucokinase
Products: NA
Alternate protein names: Glucose kinase [H]
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MQVVAVDIGGTHARFAIAEVAEGRVVSLGEAVTLKTAEHGSFQLAWEDFERVRGEPLPKAAAIAVAGPVGGEIIKFTNNP WIIRPALIPEKLGAEQYVVVNDFAAVAHAVAQADQSHFLHLSGPDEPLPASGVTSVVGPGTGLGVAQLWRDGNNYRVQPT EGGHIDFAPLDSIEDAILAGLRKRHRRVSAERVVAGPGIVDIYEALALIEGRPFTPRSDRELWELGTSGADSLAAAAVDR FCLSLGSVAGDLALAHGANGVVMAGGLGLRIKDTLVRSGFSDRFRAKGRFEALMAAIPVKLITHPQPGLFGAAAAFAQAH TS
Sequences:
>Translated_322_residues MQVVAVDIGGTHARFAIAEVAEGRVVSLGEAVTLKTAEHGSFQLAWEDFERVRGEPLPKAAAIAVAGPVGGEIIKFTNNP WIIRPALIPEKLGAEQYVVVNDFAAVAHAVAQADQSHFLHLSGPDEPLPASGVTSVVGPGTGLGVAQLWRDGNNYRVQPT EGGHIDFAPLDSIEDAILAGLRKRHRRVSAERVVAGPGIVDIYEALALIEGRPFTPRSDRELWELGTSGADSLAAAAVDR FCLSLGSVAGDLALAHGANGVVMAGGLGLRIKDTLVRSGFSDRFRAKGRFEALMAAIPVKLITHPQPGLFGAAAAFAQAH TS >Mature_322_residues MQVVAVDIGGTHARFAIAEVAEGRVVSLGEAVTLKTAEHGSFQLAWEDFERVRGEPLPKAAAIAVAGPVGGEIIKFTNNP WIIRPALIPEKLGAEQYVVVNDFAAVAHAVAQADQSHFLHLSGPDEPLPASGVTSVVGPGTGLGVAQLWRDGNNYRVQPT EGGHIDFAPLDSIEDAILAGLRKRHRRVSAERVVAGPGIVDIYEALALIEGRPFTPRSDRELWELGTSGADSLAAAAVDR FCLSLGSVAGDLALAHGANGVVMAGGLGLRIKDTLVRSGFSDRFRAKGRFEALMAAIPVKLITHPQPGLFGAAAAFAQAH TS
Specific function: Not Highly Important In E.Coli As Glucose Is Transported Into The Cell By The Pts System Already As Glucose 6-Phosphate. [C]
COG id: COG0837
COG function: function code G; Glucokinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial glucokinase family [H]
Homologues:
Organism=Escherichia coli, GI1788732, Length=315, Percent_Identity=34.6031746031746, Blast_Score=166, Evalue=2e-42,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003836 [H]
Pfam domain/function: PF02685 Glucokinase [H]
EC number: =2.7.1.2 [H]
Molecular weight: Translated: 33761; Mature: 33761
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQVVAVDIGGTHARFAIAEVAEGRVVSLGEAVTLKTAEHGSFQLAWEDFERVRGEPLPKA CEEEEEECCCCCHHHHHHHHCCCCEEECCCEEEEEECCCCCEEEEHHHHHHHCCCCCCCC AAIAVAGPVGGEIIKFTNNPWIIRPALIPEKLGAEQYVVVNDFAAVAHAVAQADQSHFLH EEEEEECCCCCEEEEECCCCEEEECCCCHHHCCCCCEEEEEHHHHHHHHHHHCCCCCEEE LSGPDEPLPASGVTSVVGPGTGLGVAQLWRDGNNYRVQPTEGGHIDFAPLDSIEDAILAG ECCCCCCCCCCCCCHHCCCCCCCCHHHHHHCCCCEEEECCCCCEEECCCCCHHHHHHHHH LRKRHRRVSAERVVAGPGIVDIYEALALIEGRPFTPRSDRELWELGTSGADSLAAAAVDR HHHHHHHHCHHHEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHH FCLSLGSVAGDLALAHGANGVVMAGGLGLRIKDTLVRSGFSDRFRAKGRFEALMAAIPVK HHHHHHHHHHHHHEECCCCCEEEECCCCEEEHHHHHHCCCCHHHHCCCHHHHHHHHHCHH LITHPQPGLFGAAAAFAQAHTS EEECCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MQVVAVDIGGTHARFAIAEVAEGRVVSLGEAVTLKTAEHGSFQLAWEDFERVRGEPLPKA CEEEEEECCCCCHHHHHHHHCCCCEEECCCEEEEEECCCCCEEEEHHHHHHHCCCCCCCC AAIAVAGPVGGEIIKFTNNPWIIRPALIPEKLGAEQYVVVNDFAAVAHAVAQADQSHFLH EEEEEECCCCCEEEEECCCCEEEECCCCHHHCCCCCEEEEEHHHHHHHHHHHCCCCCEEE LSGPDEPLPASGVTSVVGPGTGLGVAQLWRDGNNYRVQPTEGGHIDFAPLDSIEDAILAG ECCCCCCCCCCCCCHHCCCCCCCCHHHHHHCCCCEEEECCCCCEEECCCCCHHHHHHHHH LRKRHRRVSAERVVAGPGIVDIYEALALIEGRPFTPRSDRELWELGTSGADSLAAAAVDR HHHHHHHHCHHHEECCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHH FCLSLGSVAGDLALAHGANGVVMAGGLGLRIKDTLVRSGFSDRFRAKGRFEALMAAIPVK HHHHHHHHHHHHHEECCCCCEEEECCCCEEEHHHHHHCCCCHHHHCCCHHHHHHHHHCHH LITHPQPGLFGAAAAFAQAHTS EEECCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2254282 [H]