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The map label for this gene is yogA [H]

Identifier: 87199881

GI number: 87199881

Start: 1964998

End: 1966011

Strand: Direct

Name: yogA [H]

Synonym: Saro_1864

Alternate gene names: 87199881

Gene position: 1964998-1966011 (Clockwise)

Preceding gene: 87199880

Following gene: 87199882

Centisome position: 55.17

GC content: 66.96

Gene sequence:

>1014_bases
ATGCGCCAATGGCTTGTTGCGAAGGGGTCGACCTCGCTCGACGATCTGAGAATGGGCGACGTGCCGGTCCCGCAACCGGG
TGCGGGTGAGGTGCTGGTACGGGTTCATGCCTGCTCGCTGAACTATCGCGACCAGATCATTCCCCTGGGCTTCTACATGG
GCGGCGTGGTGCAGCATGACACTGTGCCGCTTTCCGATGGCGCGGGCGAAATCGTAGCGGTGGGTGAGGGTGTTTCCTCG
TTCAAGGTCGGCGACCGGGTGGCCGGGCTCTTCTTCCAGAACTGGAACGACGGTCCGCCGAACCCCGGCGTGGGCCCCGC
GCTGGGCGCGCCGCCGGCGCAGGGGATGCTTCAGGATTACGTCGTGCTGCCCGAGCACGGTGTCGTGCGCCTTGCCGCGA
CGCTGGACTATACCGAGGCGGCATGCCTGCCCTGCGCCGGCGTCACTGCCTGGAACGCGCTGATGGAAGGCCCGCGTCCT
GTGAAGGCAGGCGACAGCGTGCTGGTGCTGGGCACCGGCGGCGTGTCGCTGCTGGCCTTGCAGATCGCCAAGGCCGCAGG
AGCGACGGTGATCGCGACGTCTTCGTCGGACGAGAAGCTGGAGCGGGTCAAGGCGCTCGGCGCGGACCATGTGATCAATT
ACCGCACGACGCCCGAATGGGGCGCGGAAGCGGCCCGGCTTGCCGGCGGCGGGGTGGACAAGGTCGTCGAGGTTGGCGGG
GCGGGCACGCTTTCGCAGTCGATCGCGGCGGTCGGCTTCGCCGGCGAGATCGCGCTGATCGGCGTGCTGACGCGCGAGGG
TGACACCAACCCGCACGGGCTGATGTTCAAGGGCGCATCGATCCGCGGGATCTTCGTCGGCTCGAAGGGCATGGCCGAAC
GTCTCAACGCCTTCATCGACGCGCACGGCATCAAGCCGGTCGTCGACCGGGCGTTCCCCATCGAGCAGGCAATGGATGCC
TATTCCTATCAATCTTCGCCGGGGCTCTTCGGGAAGGTCGCAATAACCCTTTGA

Upstream 100 bases:

>100_bases
GAGATGAACCCGAATTAGTTCACTAGGTGAAATCTGTTTGTCTGACTGATTAATTCCTGCCGGCGAATGGGCGATGATCG
CCGGAAGGGAGAAGAACACG

Downstream 100 bases:

>100_bases
TGCAGTATGATTGTCGCGCCGACTGCCCATAGAGGTGGCGGCGCAGGAGAGGAAATCGATGGCGAGCTTGCTCGGATTTG
GCCAGCCTTTCGGCGGCGTG

Product: alcohol dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRQWLVAKGSTSLDDLRMGDVPVPQPGAGEVLVRVHACSLNYRDQIIPLGFYMGGVVQHDTVPLSDGAGEIVAVGEGVSS
FKVGDRVAGLFFQNWNDGPPNPGVGPALGAPPAQGMLQDYVVLPEHGVVRLAATLDYTEAACLPCAGVTAWNALMEGPRP
VKAGDSVLVLGTGGVSLLALQIAKAAGATVIATSSSDEKLERVKALGADHVINYRTTPEWGAEAARLAGGGVDKVVEVGG
AGTLSQSIAAVGFAGEIALIGVLTREGDTNPHGLMFKGASIRGIFVGSKGMAERLNAFIDAHGIKPVVDRAFPIEQAMDA
YSYQSSPGLFGKVAITL

Sequences:

>Translated_337_residues
MRQWLVAKGSTSLDDLRMGDVPVPQPGAGEVLVRVHACSLNYRDQIIPLGFYMGGVVQHDTVPLSDGAGEIVAVGEGVSS
FKVGDRVAGLFFQNWNDGPPNPGVGPALGAPPAQGMLQDYVVLPEHGVVRLAATLDYTEAACLPCAGVTAWNALMEGPRP
VKAGDSVLVLGTGGVSLLALQIAKAAGATVIATSSSDEKLERVKALGADHVINYRTTPEWGAEAARLAGGGVDKVVEVGG
AGTLSQSIAAVGFAGEIALIGVLTREGDTNPHGLMFKGASIRGIFVGSKGMAERLNAFIDAHGIKPVVDRAFPIEQAMDA
YSYQSSPGLFGKVAITL
>Mature_337_residues
MRQWLVAKGSTSLDDLRMGDVPVPQPGAGEVLVRVHACSLNYRDQIIPLGFYMGGVVQHDTVPLSDGAGEIVAVGEGVSS
FKVGDRVAGLFFQNWNDGPPNPGVGPALGAPPAQGMLQDYVVLPEHGVVRLAATLDYTEAACLPCAGVTAWNALMEGPRP
VKAGDSVLVLGTGGVSLLALQIAKAAGATVIATSSSDEKLERVKALGADHVINYRTTPEWGAEAARLAGGGVDKVVEVGG
AGTLSQSIAAVGFAGEIALIGVLTREGDTNPHGLMFKGASIRGIFVGSKGMAERLNAFIDAHGIKPVVDRAFPIEQAMDA
YSYQSSPGLFGKVAITL

Specific function: Unknown

COG id: COG0604

COG function: function code CR; NADPH:quinone reductase and related Zn-dependent oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the zinc-containing alcohol dehydrogenase family. Quinone oxidoreductase subfamily [H]

Homologues:

Organism=Homo sapiens, GI194239674, Length=310, Percent_Identity=30.6451612903226, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI13236495, Length=310, Percent_Identity=30.6451612903226, Blast_Score=113, Evalue=3e-25,
Organism=Homo sapiens, GI194239676, Length=309, Percent_Identity=30.0970873786408, Blast_Score=102, Evalue=5e-22,
Organism=Homo sapiens, GI22538446, Length=348, Percent_Identity=27.0114942528736, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI22538444, Length=348, Percent_Identity=27.0114942528736, Blast_Score=95, Evalue=9e-20,
Organism=Homo sapiens, GI18379349, Length=332, Percent_Identity=26.2048192771084, Blast_Score=83, Evalue=4e-16,
Organism=Homo sapiens, GI28557745, Length=281, Percent_Identity=30.2491103202847, Blast_Score=79, Evalue=6e-15,
Organism=Homo sapiens, GI156627571, Length=327, Percent_Identity=27.82874617737, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI47519420, Length=334, Percent_Identity=27.2455089820359, Blast_Score=77, Evalue=2e-14,
Organism=Homo sapiens, GI24308257, Length=361, Percent_Identity=24.0997229916898, Blast_Score=73, Evalue=4e-13,
Organism=Homo sapiens, GI197927207, Length=169, Percent_Identity=30.7692307692308, Blast_Score=65, Evalue=9e-11,
Organism=Escherichia coli, GI87082125, Length=351, Percent_Identity=30.7692307692308, Blast_Score=81, Evalue=7e-17,
Organism=Escherichia coli, GI1790045, Length=339, Percent_Identity=24.188790560472, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1788073, Length=237, Percent_Identity=30.379746835443, Blast_Score=65, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI17562876, Length=269, Percent_Identity=30.4832713754647, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI17562878, Length=212, Percent_Identity=32.0754716981132, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17562584, Length=306, Percent_Identity=26.1437908496732, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71988145, Length=288, Percent_Identity=25, Blast_Score=68, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6319520, Length=243, Percent_Identity=28.3950617283951, Blast_Score=81, Evalue=2e-16,
Organism=Saccharomyces cerevisiae, GI6319955, Length=292, Percent_Identity=28.4246575342466, Blast_Score=80, Evalue=6e-16,
Organism=Saccharomyces cerevisiae, GI6322619, Length=292, Percent_Identity=28.4246575342466, Blast_Score=79, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6323729, Length=300, Percent_Identity=27.6666666666667, Blast_Score=78, Evalue=2e-15,
Organism=Saccharomyces cerevisiae, GI6323961, Length=297, Percent_Identity=24.5791245791246, Blast_Score=63, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6324486, Length=297, Percent_Identity=25.2525252525253, Blast_Score=63, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013149
- InterPro:   IPR013154
- InterPro:   IPR002085
- InterPro:   IPR011032
- InterPro:   IPR016040 [H]

Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]

EC number: NA

Molecular weight: Translated: 34781; Mature: 34781

Theoretical pI: Translated: 5.14; Mature: 5.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQWLVAKGSTSLDDLRMGDVPVPQPGAGEVLVRVHACSLNYRDQIIPLGFYMGGVVQHD
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEHHHHCCEEECC
TVPLSDGAGEIVAVGEGVSSFKVGDRVAGLFFQNWNDGPPNPGVGPALGAPPAQGMLQDY
CEECCCCCCCEEEECCCCCHHHHCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHE
VVLPEHGVVRLAATLDYTEAACLPCAGVTAWNALMEGPRPVKAGDSVLVLGTGGVSLLAL
EECCCCCEEEEEEECCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHH
QIAKAAGATVIATSSSDEKLERVKALGADHVINYRTTPEWGAEAARLAGGGVDKVVEVGG
HHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCHHHHHEECC
AGTLSQSIAAVGFAGEIALIGVLTREGDTNPHGLMFKGASIRGIFVGSKGMAERLNAFID
CCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHH
AHGIKPVVDRAFPIEQAMDAYSYQSSPGLFGKVAITL
HCCCCHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEEC
>Mature Secondary Structure
MRQWLVAKGSTSLDDLRMGDVPVPQPGAGEVLVRVHACSLNYRDQIIPLGFYMGGVVQHD
CCCEEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCEEEEHHHHCCEEECC
TVPLSDGAGEIVAVGEGVSSFKVGDRVAGLFFQNWNDGPPNPGVGPALGAPPAQGMLQDY
CEECCCCCCCEEEECCCCCHHHHCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHE
VVLPEHGVVRLAATLDYTEAACLPCAGVTAWNALMEGPRPVKAGDSVLVLGTGGVSLLAL
EECCCCCEEEEEEECCCCHHHHCCCCCHHHHHHHHCCCCCCCCCCCEEEEECCCHHHHHH
QIAKAAGATVIATSSSDEKLERVKALGADHVINYRTTPEWGAEAARLAGGGVDKVVEVGG
HHHHHCCCEEEEECCCHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHCCCCHHHHHEECC
AGTLSQSIAAVGFAGEIALIGVLTREGDTNPHGLMFKGASIRGIFVGSKGMAERLNAFID
CCHHHHHHHHHCCCCCEEEEEEEECCCCCCCCCEEEECCCEEEEEECCCCHHHHHHHHHH
AHGIKPVVDRAFPIEQAMDAYSYQSSPGLFGKVAITL
HCCCCHHHHCCCCHHHHHHHHCCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]