| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is mhpR [C]
Identifier: 87199880
GI number: 87199880
Start: 1964115
End: 1964915
Strand: Direct
Name: mhpR [C]
Synonym: Saro_1863
Alternate gene names: 87199880
Gene position: 1964115-1964915 (Clockwise)
Preceding gene: 87199874
Following gene: 87199881
Centisome position: 55.15
GC content: 67.42
Gene sequence:
>801_bases ATGCTGGAACGCAGGGTCAAGACCGTGCGCGCGCTCGAACGTGGGCTGGACGTGCTGATCGAAGTGCAGACGCGCAAGGC CGCCAGCCTGCACGAACTGCACCTCGCCACGGGCCTGCCAAAGGCAACGCTTTTGCGCATGCTGGTGACGCTGGGCCAGA AGGGGCTGGTGTGGCAGAGGCTTGCGGACGGTGCCTATCTGCCGCACGTGGACCGGGTCGAACGGGCGCCGGTGACGTCT TCCTCGCACATCGCCGAAATTGCCTCGCCGCACATGAAGGCGCTTTCCACGCGGGTGGCCTGGCCATCGGTGCTGGCCGC GCCGCGGCTCGATCACATGGAAATCCTCGAGACCAACAGCCCGTTGTTCAAGCTCGATTCGGCGATTCTCGGACCGGTCG GCGTGAAGCTGTCCTACATCCATACCGCGACCGGGCGCGCCTATCTGGCGGCCTGCGGCGATGCCGAGCGCGATTCGATC ATCGACCGGCTGCGCCCGCGCAATCCGCCTGAGGGAAGCGAGGCGGAACTTCGCCAGATGCTGCTTCAGGTGCGCCAGCG CGGTTATGCGACCCGCGATCCGCTGCTGCCCTGGCCGGACCGGTCGAAGCAGCTCGTGCTGCGCGACGGGCGGCGGTCGA TGGCGGTTCCGATCATGGTTGCCGGAGCGCCCATTGCCACGATCAACGTGACCTGGCCGGGGCGTCGTGGCGCAGACGAG GCGGTGGTCCAGCGGCATCTCGATGCGCTGAAGGCCACGGCCCGCGCCATCGGCAGGGCGCTGGAGATGAACCCGAATTA G
Upstream 100 bases:
>100_bases TGCGACACTGCGGTTGACTTTGCACGAGGCTTTCGGGATTTTACGTTCCATAAGGTGAAACGCATAAATCGCCGCCATGA GCGGAATGGGAGCCGGAAGG
Downstream 100 bases:
>100_bases TTCACTAGGTGAAATCTGTTTGTCTGACTGATTAATTCCTGCCGGCGAATGGGCGATGATCGCCGGAAGGGAGAAGAACA CGATGCGCCAATGGCTTGTT
Product: IclR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator IclR Family; Transcriptional Regulator For Mhp Operon; Transcriptional Regulator; Transcriptional Regulator Family Protein; Transcriptional Regulator MhpR Protein; Transcriptional Regulatory Protein
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MLERRVKTVRALERGLDVLIEVQTRKAASLHELHLATGLPKATLLRMLVTLGQKGLVWQRLADGAYLPHVDRVERAPVTS SSHIAEIASPHMKALSTRVAWPSVLAAPRLDHMEILETNSPLFKLDSAILGPVGVKLSYIHTATGRAYLAACGDAERDSI IDRLRPRNPPEGSEAELRQMLLQVRQRGYATRDPLLPWPDRSKQLVLRDGRRSMAVPIMVAGAPIATINVTWPGRRGADE AVVQRHLDALKATARAIGRALEMNPN
Sequences:
>Translated_266_residues MLERRVKTVRALERGLDVLIEVQTRKAASLHELHLATGLPKATLLRMLVTLGQKGLVWQRLADGAYLPHVDRVERAPVTS SSHIAEIASPHMKALSTRVAWPSVLAAPRLDHMEILETNSPLFKLDSAILGPVGVKLSYIHTATGRAYLAACGDAERDSI IDRLRPRNPPEGSEAELRQMLLQVRQRGYATRDPLLPWPDRSKQLVLRDGRRSMAVPIMVAGAPIATINVTWPGRRGADE AVVQRHLDALKATARAIGRALEMNPN >Mature_266_residues MLERRVKTVRALERGLDVLIEVQTRKAASLHELHLATGLPKATLLRMLVTLGQKGLVWQRLADGAYLPHVDRVERAPVTS SSHIAEIASPHMKALSTRVAWPSVLAAPRLDHMEILETNSPLFKLDSAILGPVGVKLSYIHTATGRAYLAACGDAERDSI IDRLRPRNPPEGSEAELRQMLLQVRQRGYATRDPLLPWPDRSKQLVLRDGRRSMAVPIMVAGAPIATINVTWPGRRGADE AVVQRHLDALKATARAIGRALEMNPN
Specific function: Activator Of The Mhprabcdef Operon Coding For Components Of The 3-Hydroxyphenylpropionate Degradation Pathway. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI145693096, Length=262, Percent_Identity=27.0992366412214, Blast_Score=64, Evalue=1e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29338; Mature: 29338
Theoretical pI: Translated: 10.88; Mature: 10.88
Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLERRVKTVRALERGLDVLIEVQTRKAASLHELHLATGLPKATLLRMLVTLGQKGLVWQR CCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHH LADGAYLPHVDRVERAPVTSSSHIAEIASPHMKALSTRVAWPSVLAAPRLDHMEILETNS HHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHCCC PLFKLDSAILGPVGVKLSYIHTATGRAYLAACGDAERDSIIDRLRPRNPPEGSEAELRQM CHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHH LLQVRQRGYATRDPLLPWPDRSKQLVLRDGRRSMAVPIMVAGAPIATINVTWPGRRGADE HHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEECEEEEECCCEEEEEEECCCCCCHHH AVVQRHLDALKATARAIGRALEMNPN HHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MLERRVKTVRALERGLDVLIEVQTRKAASLHELHLATGLPKATLLRMLVTLGQKGLVWQR CCHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHH LADGAYLPHVDRVERAPVTSSSHIAEIASPHMKALSTRVAWPSVLAAPRLDHMEILETNS HHCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHCCC PLFKLDSAILGPVGVKLSYIHTATGRAYLAACGDAERDSIIDRLRPRNPPEGSEAELRQM CHHHHHHHHHCCCCCEEEEEEECCCCEEEEECCCCHHHHHHHHHCCCCCCCCCHHHHHHH LLQVRQRGYATRDPLLPWPDRSKQLVLRDGRRSMAVPIMVAGAPIATINVTWPGRRGADE HHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCEECEEEEECCCEEEEEEECCCCCCHHH AVVQRHLDALKATARAIGRALEMNPN HHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA