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The map label for this gene is ygeA [H]

Identifier: 87199864

GI number: 87199864

Start: 1946888

End: 1947580

Strand: Direct

Name: ygeA [H]

Synonym: Saro_1847

Alternate gene names: 87199864

Gene position: 1946888-1947580 (Clockwise)

Preceding gene: 87199863

Following gene: 87199865

Centisome position: 54.66

GC content: 64.21

Gene sequence:

>693_bases
TTGCGAAAGATCGGCCTTATCGGCGGAATGAGCTGGGTCTCGACCCGCACATATTACGAAGACATCAACCAGCTCGTCCA
GGCGCGCACCAGCAAGATCGCCAGTGCGCCCATGCTGATCGAGAGCCTGGACTTCACCAACCTCATCCGCCTGTCCACGC
CCGAGCAATGGGCCCACGCCGCAGGCGTGCTGACGGACAGCGCGCGCCGTCTCGAACAGGCCGGAGCGACGGCGCTGCTG
ATCGGGGCCAACTCGATGCACAAGGTCTATGATCAGGTCGCGGGCGCGGTTTCGATCCCGGTAATCCACATCGCGGACGC
GGTGGGCGTTCGGATGAAGGCCGACGGCGTGACCAATGCGACGATCCTTGGCACGCACAACGTCGTGATGGAGAGCTTCT
ACCGCAAGCGCCTTGTCAGCCACGGCATCAACCTTCTGCCGCCGGTCCTTGGCGAAGTCGACGAGATGGACCGCATCATC
TACGAGGAACTGATGCAGGGCCGCGCCACCCGCTCGGCCGAACGCACGTTCAAGACCATGCTGACCAACATGGGCCAGCG
CGGCGCGCAGGCTGCGGTCCTGGGGTGCACCGAACTCGACATGGTGATCGACGTCGACGCCAACGTCCTGCCGATCTATG
ACGGTACGCGCATCCACGCCGAGGCGGCGGTCGACTGGATCCTTGGGGGCTGA

Upstream 100 bases:

>100_bases
CGAAGCGGTGAAAGGAGCCGCGCGGGCGGTAGACGCTCGCCCCGGCCTTGCGTAATGCCCCACAGTACAGGGGACCGTTA
TCCCGCGGGGAGTTCAAGCG

Downstream 100 bases:

>100_bases
GAGCGGAACATTGGCATCGTCTCATCGTCACCCTGAACGTGTTTCAGGGTCCATCGCTCGGCACGAGTGGACCGCGTTGG
ACCGCAAATGGATGCTGAAA

Product: aspartate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 230; Mature: 230

Protein sequence:

>230_residues
MRKIGLIGGMSWVSTRTYYEDINQLVQARTSKIASAPMLIESLDFTNLIRLSTPEQWAHAAGVLTDSARRLEQAGATALL
IGANSMHKVYDQVAGAVSIPVIHIADAVGVRMKADGVTNATILGTHNVVMESFYRKRLVSHGINLLPPVLGEVDEMDRII
YEELMQGRATRSAERTFKTMLTNMGQRGAQAAVLGCTELDMVIDVDANVLPIYDGTRIHAEAAVDWILGG

Sequences:

>Translated_230_residues
MRKIGLIGGMSWVSTRTYYEDINQLVQARTSKIASAPMLIESLDFTNLIRLSTPEQWAHAAGVLTDSARRLEQAGATALL
IGANSMHKVYDQVAGAVSIPVIHIADAVGVRMKADGVTNATILGTHNVVMESFYRKRLVSHGINLLPPVLGEVDEMDRII
YEELMQGRATRSAERTFKTMLTNMGQRGAQAAVLGCTELDMVIDVDANVLPIYDGTRIHAEAAVDWILGG
>Mature_230_residues
MRKIGLIGGMSWVSTRTYYEDINQLVQARTSKIASAPMLIESLDFTNLIRLSTPEQWAHAAGVLTDSARRLEQAGATALL
IGANSMHKVYDQVAGAVSIPVIHIADAVGVRMKADGVTNATILGTHNVVMESFYRKRLVSHGINLLPPVLGEVDEMDRII
YEELMQGRATRSAERTFKTMLTNMGQRGAQAAVLGCTELDMVIDVDANVLPIYDGTRIHAEAAVDWILGG

Specific function: Unknown

COG id: COG1794

COG function: function code M; Aspartate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI1789205, Length=229, Percent_Identity=35.8078602620087, Blast_Score=165, Evalue=3e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004380 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: NA

Molecular weight: Translated: 25035; Mature: 25035

Theoretical pI: Translated: 6.24; Mature: 6.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKIGLIGGMSWVSTRTYYEDINQLVQARTSKIASAPMLIESLDFTNLIRLSTPEQWAHA
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEEEECCCHHHHHH
AGVLTDSARRLEQAGATALLIGANSMHKVYDQVAGAVSIPVIHIADAVGVRMKADGVTNA
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCHHHCCHHEEHHHHCCEEECCCCCCE
TILGTHNVVMESFYRKRLVSHGINLLPPVLGEVDEMDRIIYEELMQGRATRSAERTFKTM
EEECHHHHHHHHHHHHHHHHCCCHHCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LTNMGQRGAQAAVLGCTELDMVIDVDANVLPIYDGTRIHAEAAVDWILGG
HHHCCCCCCCEEEEECCEEEEEEECCCCEEEECCCCEEEHHHHHHHHCCC
>Mature Secondary Structure
MRKIGLIGGMSWVSTRTYYEDINQLVQARTSKIASAPMLIESLDFTNLIRLSTPEQWAHA
CCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCHHHEEEECCCHHHHHH
AGVLTDSARRLEQAGATALLIGANSMHKVYDQVAGAVSIPVIHIADAVGVRMKADGVTNA
HHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHCHHHCCHHEEHHHHCCEEECCCCCCE
TILGTHNVVMESFYRKRLVSHGINLLPPVLGEVDEMDRIIYEELMQGRATRSAERTFKTM
EEECHHHHHHHHHHHHHHHHCCCHHCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHH
LTNMGQRGAQAAVLGCTELDMVIDVDANVLPIYDGTRIHAEAAVDWILGG
HHHCCCCCCCEEEEECCEEEEEEECCCCEEEECCCCEEEHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 6350602; 2836407; 9278503 [H]