| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199863
Identifier: 87199863
GI number: 87199863
Start: 1946407
End: 1946736
Strand: Direct
Name: 87199863
Synonym: Saro_1846
Alternate gene names: NA
Gene position: 1946407-1946736 (Clockwise)
Preceding gene: 87199862
Following gene: 87199864
Centisome position: 54.65
GC content: 68.79
Gene sequence:
>330_bases ATGAAAGCGCGCATCGCTCCCGCCGCTTTGGCCCTGGCGCTGGCGGCGGGAGCATGCTCGCCTTCGAAACTGGCTTATGG AAAGGTCCGCTCGGCGCTGGTCGATGCGGGCCTTTCCGATTCCGATGCCGTCTGCATGGCCGAACGGATGACCGACCGGC TGTCCCTGGGACAGCTGAAGCGACTGCAGGCGCTGCAAGGGGCCAAGCGCGGGCTTGCCGACTATGTCGCGGCCGTCCGG CGGCTTGGCGATGCCGAACTGCTCGGCGTCACTTCGAGCTCCGCCGCGCTCTGCGCCACGGGCCTCGCGCCAGAGAAGTC GGGCGGCTGA
Upstream 100 bases:
>100_bases CTGGCGTTGACAACGACGTGTTCTACATGGACCAGACGATGATGCTCCTGGCCGACGCCAAGAAGATGGTCGAGGACATC GTCAAGGCGCTCCAGCACTG
Downstream 100 bases:
>100_bases TCCGCGCCGATACCTCCGTAATGGATGACGTGAACCGGTGGAAAGCGCCCGCGAAGCGGTGAAAGGAGCCGCGCGGGCGG TAGACGCTCGCCCCGGCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 109; Mature: 109
Protein sequence:
>109_residues MKARIAPAALALALAAGACSPSKLAYGKVRSALVDAGLSDSDAVCMAERMTDRLSLGQLKRLQALQGAKRGLADYVAAVR RLGDAELLGVTSSSAALCATGLAPEKSGG
Sequences:
>Translated_109_residues MKARIAPAALALALAAGACSPSKLAYGKVRSALVDAGLSDSDAVCMAERMTDRLSLGQLKRLQALQGAKRGLADYVAAVR RLGDAELLGVTSSSAALCATGLAPEKSGG >Mature_109_residues MKARIAPAALALALAAGACSPSKLAYGKVRSALVDAGLSDSDAVCMAERMTDRLSLGQLKRLQALQGAKRGLADYVAAVR RLGDAELLGVTSSSAALCATGLAPEKSGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10959; Mature: 10959
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00136 SUBTILASE_ASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKARIAPAALALALAAGACSPSKLAYGKVRSALVDAGLSDSDAVCMAERMTDRLSLGQLK CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RLQALQGAKRGLADYVAAVRRLGDAELLGVTSSSAALCATGLAPEKSGG HHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCCCCCC >Mature Secondary Structure MKARIAPAALALALAAGACSPSKLAYGKVRSALVDAGLSDSDAVCMAERMTDRLSLGQLK CCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHH RLQALQGAKRGLADYVAAVRRLGDAELLGVTSSSAALCATGLAPEKSGG HHHHHHHHHCCHHHHHHHHHHCCCCCEEECCCCCHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA