| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is pntAA [H]
Identifier: 87199860
GI number: 87199860
Start: 1943572
End: 1944699
Strand: Direct
Name: pntAA [H]
Synonym: Saro_1843
Alternate gene names: 87199860
Gene position: 1943572-1944699 (Clockwise)
Preceding gene: 87199858
Following gene: 87199861
Centisome position: 54.57
GC content: 65.07
Gene sequence:
>1128_bases ATGGCGGGGGCAATGAAGATCGCCGTCCTCAGGGAACGCGCGACGGGGGAGACCAGGGTTTCGGCAACGCCGGAAACCGT GAAGAAGTTCATTGCCCTTGGGGCAACAGTTGCAATTGAAGAAGGTGCAGGCATTACCGCCTCGATTTCCGACGAGGATT ATCGCGCGGTGGGCGCCGAAGTCGTGTCCAGTCCGGCAAACGGGGCGGACATCGTGCTTGGCGTCCAGGGCCCCGAGCCC GAACTGCTGGCGGGCGTGAAGCCCGGTGCCTGGATCGTGGCCGGGCTTGATCCATTCGTGAAGCGCGCCCGCGTGGACGC TTATGCGGCCGCCGGCCTTGAAGCGCTGGCGATGGAGTTCATGCCGCGCATTACACGTGCACAGTCGATGGACATCCTGT CGTCGCAGTCGAACCTTGCCGGCTACAAGGCCGTGCTGGTGGCCGCCAACCTTTATGGTCGCGCGTTCCCGATGATGATG ACGGCGGCGGGCACCGTCTCTGCCGCCAAGGCTTTTGTCATGGGCGTCGGCGTTGCCGGCCTCCAGGCCATCGCCACCGC TCGCCGTCTCGGCGCGCAGGTTTCGGCGACCGACGTCCGTTCGGCAACGAAGGAGCAGATCCAGTCGCTCGGTGCCAAGC CGATCTTCGTGGAAAGCGTTGCGGGCATCGAAGGCGAGGGCGCCGGCGGCTATGCCACGGAAATGTCCGAGGAATACCAG AAGGCCCAGGCCGAGCTGGTGAGCGCGCATATCGCCAAGCAGGACATCGTCATCACCACGGCGCTGATCCCGGGCCGCGC CGCGCCGCGCCTGATTTCCGATGCGCAGATTGCCACGATGAAGCCCGGTTCGGTCATCTTCGACCTTGCCGTGGCCCAGG GCGGCAACGTCGAGGGTTCGGTGCCCGACCAGGTTGTCGAGAAGCACGGCGTGAAGATCGTCGGCTACTCGAACACGCCC GCGCACCTGCCGGCCGACGCTTCGGCGCTGTTCAGCCGCAACCTCTACAACTTCCTCTCGGCCTTCTGGGACAAGGAACA GGGCAAGCCCGTTCTGGACGAGGAAATCGGCAACGCCATCCGCCTGACGCAGGGCGGCAAGGTGGTCAACGAACGTCTGC TCGGCTGA
Upstream 100 bases:
>100_bases CAGGCCACCTATTCCGGTTTCGTCAATATGTTGAAGTGGTCGACGCCGGCAATCTGCCTCATCGTCTTCCTGATCATCCT GGCGATCCAGTAAGCCACGC
Downstream 100 bases:
>100_bases GGGGGCCTGACATGGACTTCATATCGATCCTGAGCATTTTCGTGCTCGCCTGCTTTGTCGGGTACTACGTCGTCTGGTCG GTCACGCCGGCCCTTCACAC
Product: alanine dehydrogenase/PNT-like
Products: NA
Alternate protein names: Nicotinamide nucleotide transhydrogenase subunit alpha 1; Proton-translocating transhydrogenase component 1; Pyridine nucleotide transhydrogenase subunit alpha 1; dI [H]
Number of amino acids: Translated: 375; Mature: 374
Protein sequence:
>375_residues MAGAMKIAVLRERATGETRVSATPETVKKFIALGATVAIEEGAGITASISDEDYRAVGAEVVSSPANGADIVLGVQGPEP ELLAGVKPGAWIVAGLDPFVKRARVDAYAAAGLEALAMEFMPRITRAQSMDILSSQSNLAGYKAVLVAANLYGRAFPMMM TAAGTVSAAKAFVMGVGVAGLQAIATARRLGAQVSATDVRSATKEQIQSLGAKPIFVESVAGIEGEGAGGYATEMSEEYQ KAQAELVSAHIAKQDIVITTALIPGRAAPRLISDAQIATMKPGSVIFDLAVAQGGNVEGSVPDQVVEKHGVKIVGYSNTP AHLPADASALFSRNLYNFLSAFWDKEQGKPVLDEEIGNAIRLTQGGKVVNERLLG
Sequences:
>Translated_375_residues MAGAMKIAVLRERATGETRVSATPETVKKFIALGATVAIEEGAGITASISDEDYRAVGAEVVSSPANGADIVLGVQGPEP ELLAGVKPGAWIVAGLDPFVKRARVDAYAAAGLEALAMEFMPRITRAQSMDILSSQSNLAGYKAVLVAANLYGRAFPMMM TAAGTVSAAKAFVMGVGVAGLQAIATARRLGAQVSATDVRSATKEQIQSLGAKPIFVESVAGIEGEGAGGYATEMSEEYQ KAQAELVSAHIAKQDIVITTALIPGRAAPRLISDAQIATMKPGSVIFDLAVAQGGNVEGSVPDQVVEKHGVKIVGYSNTP AHLPADASALFSRNLYNFLSAFWDKEQGKPVLDEEIGNAIRLTQGGKVVNERLLG >Mature_374_residues AGAMKIAVLRERATGETRVSATPETVKKFIALGATVAIEEGAGITASISDEDYRAVGAEVVSSPANGADIVLGVQGPEPE LLAGVKPGAWIVAGLDPFVKRARVDAYAAAGLEALAMEFMPRITRAQSMDILSSQSNLAGYKAVLVAANLYGRAFPMMMT AAGTVSAAKAFVMGVGVAGLQAIATARRLGAQVSATDVRSATKEQIQSLGAKPIFVESVAGIEGEGAGGYATEMSEEYQK AQAELVSAHIAKQDIVITTALIPGRAAPRLISDAQIATMKPGSVIFDLAVAQGGNVEGSVPDQVVEKHGVKIVGYSNTPA HLPADASALFSRNLYNFLSAFWDKEQGKPVLDEEIGNAIRLTQGGKVVNERLLG
Specific function: The transhydrogenation between NADH and NADP is coupled to respiration and ATP hydrolysis and functions as a proton pump across the membrane [H]
COG id: COG3288
COG function: function code C; NAD/NADP transhydrogenase alpha subunit
Gene ontology:
Cell location: Integral Membrane Protein. Inner Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AlaDH/PNT family [H]
Homologues:
Organism=Homo sapiens, GI122939155, Length=351, Percent_Identity=37.6068376068376, Blast_Score=218, Evalue=1e-56, Organism=Homo sapiens, GI122939153, Length=351, Percent_Identity=37.6068376068376, Blast_Score=218, Evalue=1e-56, Organism=Escherichia coli, GI1787887, Length=351, Percent_Identity=43.3048433048433, Blast_Score=268, Evalue=4e-73, Organism=Caenorhabditis elegans, GI17550456, Length=336, Percent_Identity=43.452380952381, Blast_Score=261, Evalue=5e-70,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007698 - InterPro: IPR008142 - InterPro: IPR008143 - InterPro: IPR007886 [H]
Pfam domain/function: PF01262 AlaDh_PNT_C; PF05222 AlaDh_PNT_N [H]
EC number: =1.6.1.2 [H]
Molecular weight: Translated: 38894; Mature: 38763
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS00837 ALADH_PNT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGAMKIAVLRERATGETRVSATPETVKKFIALGATVAIEEGAGITASISDEDYRAVGAE CCCCEEEEEEHHCCCCCCEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCHHHHHHHH VVSSPANGADIVLGVQGPEPELLAGVKPGAWIVAGLDPFVKRARVDAYAAAGLEALAMEF HHCCCCCCCEEEEECCCCCCHHEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH MPRITRAQSMDILSSQSNLAGYKAVLVAANLYGRAFPMMMTAAGTVSAAKAFVMGVGVAG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH LQAIATARRLGAQVSATDVRSATKEQIQSLGAKPIFVESVAGIEGEGAGGYATEMSEEYQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCHHHHHHHHHH KAQAELVSAHIAKQDIVITTALIPGRAAPRLISDAQIATMKPGSVIFDLAVAQGGNVEGS HHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHCCCEEEEECCCCEEEEEEECCCCCCCCC VPDQVVEKHGVKIVGYSNTPAHLPADASALFSRNLYNFLSAFWDKEQGKPVLDEEIGNAI CHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEE RLTQGGKVVNERLLG EEECCCHHHHHHCCC >Mature Secondary Structure AGAMKIAVLRERATGETRVSATPETVKKFIALGATVAIEEGAGITASISDEDYRAVGAE CCCEEEEEEHHCCCCCCEECCCHHHHHHHHHHCCEEEEECCCCEEEECCCCHHHHHHHH VVSSPANGADIVLGVQGPEPELLAGVKPGAWIVAGLDPFVKRARVDAYAAAGLEALAMEF HHCCCCCCCEEEEECCCCCCHHEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHH MPRITRAQSMDILSSQSNLAGYKAVLVAANLYGRAFPMMMTAAGTVSAAKAFVMGVGVAG HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHH LQAIATARRLGAQVSATDVRSATKEQIQSLGAKPIFVESVAGIEGEGAGGYATEMSEEYQ HHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCEEEEHHCCCCCCCCCCHHHHHHHHHH KAQAELVSAHIAKQDIVITTALIPGRAAPRLISDAQIATMKPGSVIFDLAVAQGGNVEGS HHHHHHHHHHHHHCCEEEEEEECCCCCCCCHHCCCEEEEECCCCEEEEEEECCCCCCCCC VPDQVVEKHGVKIVGYSNTPAHLPADASALFSRNLYNFLSAFWDKEQGKPVLDEEIGNAI CHHHHHHHCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHCCCEE RLTQGGKVVNERLLG EEECCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8075801 [H]