| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199835
Identifier: 87199835
GI number: 87199835
Start: 1917490
End: 1918086
Strand: Direct
Name: 87199835
Synonym: Saro_1818
Alternate gene names: NA
Gene position: 1917490-1918086 (Clockwise)
Preceding gene: 87199828
Following gene: 87199836
Centisome position: 53.84
GC content: 63.99
Gene sequence:
>597_bases ATGAACAGACAGGGCGTGCGATTGTTGCCGGACCGGGGTGGTAGCCTGGCTGCTTTCGGTGTCGGATTGGCGGTGGTCAT CATTCTTCTGGGCATGGGGCGGCCGCCGATCTGCCCGTGCGGCGTGGTGCGACTATGGCACGGCGTGGTGGAATCGGCAG AGAACAGCCAGCAGGTCTCGGACTGGTACAGCTTCAGCCATCTGATCCACGGCTTCCTGTTCTACGGCGCGGCGCACATT GTCTGGCGCAGGTTCGGCTTCGCGGAGCTTTCCCCGAGGTGGGCCCTTGCCCTTGCGGTCCTGATCGAGGGATCTTGGGA AATCCTCGAGAATTCGCCCATCATCATCGACCGCTATCGTTCGGTCACGATCTCGTGGGGCTATTCGGGCGACAGCGTAC TCAACTCCGCCGCCGACATCGGCTTCATGGCGGCGGGCTTCCTGTTCGCAGCGCGCGCGCCCGTGCTGGTCACCGTCGTT CTGGGCATCGGGTTCGAGCTCTTCACGCTCTGGGCGATCAGGGACAATCTCGCGCTGAACATCCTCATGCTCGTCTGGCC GGTGGAGGCGGTGCGCGTCTGGCAGGGTGGCGGCTGA
Upstream 100 bases:
>100_bases GTCATCCCGATCCGCTTAGGGACATGCGGTTGCCGGTGCAACCACGCGCTTGTGCCCCGGTCCCCGACACGTCAGAAAGG GCAGGCAGGCAGGAGGGGCC
Downstream 100 bases:
>100_bases CCGTCTGTTTTTCTTGACCGATAGTCTCACTGCCACGACCATCAGGTTGCAAGTTGACACCGATCAATGTCACTTTTCCC ATCGAGCCGAAAACGGCCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 198
Protein sequence:
>198_residues MNRQGVRLLPDRGGSLAAFGVGLAVVIILLGMGRPPICPCGVVRLWHGVVESAENSQQVSDWYSFSHLIHGFLFYGAAHI VWRRFGFAELSPRWALALAVLIEGSWEILENSPIIIDRYRSVTISWGYSGDSVLNSAADIGFMAAGFLFAARAPVLVTVV LGIGFELFTLWAIRDNLALNILMLVWPVEAVRVWQGGG
Sequences:
>Translated_198_residues MNRQGVRLLPDRGGSLAAFGVGLAVVIILLGMGRPPICPCGVVRLWHGVVESAENSQQVSDWYSFSHLIHGFLFYGAAHI VWRRFGFAELSPRWALALAVLIEGSWEILENSPIIIDRYRSVTISWGYSGDSVLNSAADIGFMAAGFLFAARAPVLVTVV LGIGFELFTLWAIRDNLALNILMLVWPVEAVRVWQGGG >Mature_198_residues MNRQGVRLLPDRGGSLAAFGVGLAVVIILLGMGRPPICPCGVVRLWHGVVESAENSQQVSDWYSFSHLIHGFLFYGAAHI VWRRFGFAELSPRWALALAVLIEGSWEILENSPIIIDRYRSVTISWGYSGDSVLNSAADIGFMAAGFLFAARAPVLVTVV LGIGFELFTLWAIRDNLALNILMLVWPVEAVRVWQGGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0314 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y1818_NOVAD (Q2G7B5)
Other databases:
- EMBL: CP000248 - RefSeq: YP_497092.1 - STRING: Q2G7B5 - GeneID: 3918377 - GenomeReviews: CP000248_GR - KEGG: nar:Saro_1818 - NMPDR: fig|48935.1.peg.1352 - eggNOG: NOG40543 - HOGENOM: HBG299577 - OMA: SHIIHGF - ProtClustDB: PRK00944 - BioCyc: NARO279238:SARO_1818-MONOMER - HAMAP: MF_01514 - InterPro: IPR019691
Pfam domain/function: PF10755 DUF2585
EC number: NA
Molecular weight: Translated: 21668; Mature: 21668
Theoretical pI: Translated: 6.94; Mature: 6.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x1646f2ac)-; HASH(0x149f68f0)-; HASH(0x15f2bd20)-; HASH(0x1635fa94)-; HASH(0x15a4d1f0)-;
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRQGVRLLPDRGGSLAAFGVGLAVVIILLGMGRPPICPCGVVRLWHGVVESAENSQQVS CCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH DWYSFSHLIHGFLFYGAAHIVWRRFGFAELSPRWALALAVLIEGSWEILENSPIIIDRYR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEECE SVTISWGYSGDSVLNSAADIGFMAAGFLFAARAPVLVTVVLGIGFELFTLWAIRDNLALN EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCHHHH ILMLVWPVEAVRVWQGGG HHHHHHHHHHHEEECCCH >Mature Secondary Structure MNRQGVRLLPDRGGSLAAFGVGLAVVIILLGMGRPPICPCGVVRLWHGVVESAENSQQVS CCCCCCEEECCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCHHHHH DWYSFSHLIHGFLFYGAAHIVWRRFGFAELSPRWALALAVLIEGSWEILENSPIIIDRYR HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHCCCCEEEEECE SVTISWGYSGDSVLNSAADIGFMAAGFLFAARAPVLVTVVLGIGFELFTLWAIRDNLALN EEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHCCHHHH ILMLVWPVEAVRVWQGGG HHHHHHHHHHHEEECCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA