| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is guaB [H]
Identifier: 87199769
GI number: 87199769
Start: 1846624
End: 1848126
Strand: Direct
Name: guaB [H]
Synonym: Saro_1752
Alternate gene names: 87199769
Gene position: 1846624-1848126 (Clockwise)
Preceding gene: 87199768
Following gene: 87199770
Centisome position: 51.85
GC content: 66.2
Gene sequence:
>1503_bases ATGGGCCGCCACGAATCTCCCCGGACACAGGAAGTGGCGCCCATCATGGATATCCCTCTCGGCCTTACCTTCGACGACGT GCTTCTGCGTCCTGCCGAGTCGGACATCGTGCCATCCCAGGCCGACACCCGCACCCGCCTGACCAAGGGCATCGGCCTCA ACATCCCAATCCTGTCCTCTGCCATGGACACCGTGACCGAGGCCGACATGGCCATCGTCATGGCGCAGCTTGGCGGGATC GGCGTACTCCACCGCAACCTTTCGATCGAAGAGCAGTGCGCCGCGGTCCGGGCGGTAAAGCGCTTCGAGAGCGGGATGGT CGTCAACCCCATCACCATTTCCCCCGATGCCCCGCTGGGCGAGGCGCAGGCGCTGATGCGCCAGCACAAGATCAGCGGCA TTCCGGTGGTCGAGGCGTCCGGCAAGCTCGTCGGCATTCTCACCAACCGCGACGTGCGCTTTGCCGACAACCCGCAGCAG CCCGTGCGCGAACTCATGACGCACGAGAACCTGGCGACCGTGAAGCTCGGTTCGAGTGGCGACGAGGCGCGCCGCCTGCT GCATCAGCGCCGGATCGAGAAGCTGCTGGTGGTGGACGATGCCTTCCACTGCATTGGCCTCATCACGGTGAAGGACATCG AGAAGGCGGTCACTTTCCCCAACGCCACCAAGGATGCGGCCGGACGCCTGCGCGTTGCCGCCGCCACGACGGTCGGCGAA AAAGGCCTCCTGCGCACCCAGGCGCTGGTCGAGGCGGAATGCGACGTGGTGATCATCGACACCGCCCACGGGCACAACCG TGACGTTGCCCGCGCCGTCGAGGCAGCGAAGAAGCTGTCGAATTCGGTCCAGGTGATCGCCGGCAACGTCGCCACGGCCG AGGCGACGCGTTCGCTGATCGATGCGGGCGCGGACGGCGTGAAGATCGGCATCGGCCCCGGATCGATCTGCACCACCCGC ATCGTCGCGGGCGTTGGCGTGCCCCAGCTGACCGCCGTGATGGAATGCGCCGCCGAAGCGGAAAAGTCGGGCGTGCCGGT CATTGCCGACGGCGGCCTGCGGACTTCGGGCGACGCTGCAAAGGCGCTGGCCGCCGGTGCAAGCTCGGTCATGATCGGGT CGATGCTTGCCGGCACCGAGGAAGCGCCGGGCGAGACGTTCCTCTACCAGGGACGCGCCTACAAGTCGTATCGCGGCATG GGTTCGGTGGGTGCGATGGCGCGCGGCAGCGCGGATCGCTATTTCCAGCAGGACATCAAGGACCAAATGAAGCTGGTGCC TGAAGGCATTGAAGGCCAGGTGCCCTACAAGGGACCGGCCAAGGATGTGGTCCACCAGCTCGTCGGCGGCATCAAGGCCG CGATGGGCTATACCGGCAGCCCCACGATCGACGATCTGCGCAAGCGCGCGCAGTTCGTGCGCATCACCAATGCGGGCCTG CGCGAAAGTCACGTCCACGACGTGACGATCACGCGCGAGGCGCCGAACTACAAGGTGGGCTGA
Upstream 100 bases:
>100_bases AGGCGGAACTGGTCCGCGCATTCGCCGATCCGAAGCGCTATCCGGGGGCCGGATCGAAGCGGGCCCAAACCCCCTAGCGG AACCCGATCTTCCTGTTTAC
Downstream 100 bases:
>100_bases GAGCCACCCGATGACCCCTTCCGCCCGCGTACAGGCGGCGATCGATCTGCTTGACGCGGTGATCGCGGCGGCGAAGGCGC AAGGGGCATCTGCCGATCGG
Product: inosine-5'-monophosphate dehydrogenase
Products: NA
Alternate protein names: IMP dehydrogenase; IMPD; IMPDH [H]
Number of amino acids: Translated: 500; Mature: 499
Protein sequence:
>500_residues MGRHESPRTQEVAPIMDIPLGLTFDDVLLRPAESDIVPSQADTRTRLTKGIGLNIPILSSAMDTVTEADMAIVMAQLGGI GVLHRNLSIEEQCAAVRAVKRFESGMVVNPITISPDAPLGEAQALMRQHKISGIPVVEASGKLVGILTNRDVRFADNPQQ PVRELMTHENLATVKLGSSGDEARRLLHQRRIEKLLVVDDAFHCIGLITVKDIEKAVTFPNATKDAAGRLRVAAATTVGE KGLLRTQALVEAECDVVIIDTAHGHNRDVARAVEAAKKLSNSVQVIAGNVATAEATRSLIDAGADGVKIGIGPGSICTTR IVAGVGVPQLTAVMECAAEAEKSGVPVIADGGLRTSGDAAKALAAGASSVMIGSMLAGTEEAPGETFLYQGRAYKSYRGM GSVGAMARGSADRYFQQDIKDQMKLVPEGIEGQVPYKGPAKDVVHQLVGGIKAAMGYTGSPTIDDLRKRAQFVRITNAGL RESHVHDVTITREAPNYKVG
Sequences:
>Translated_500_residues MGRHESPRTQEVAPIMDIPLGLTFDDVLLRPAESDIVPSQADTRTRLTKGIGLNIPILSSAMDTVTEADMAIVMAQLGGI GVLHRNLSIEEQCAAVRAVKRFESGMVVNPITISPDAPLGEAQALMRQHKISGIPVVEASGKLVGILTNRDVRFADNPQQ PVRELMTHENLATVKLGSSGDEARRLLHQRRIEKLLVVDDAFHCIGLITVKDIEKAVTFPNATKDAAGRLRVAAATTVGE KGLLRTQALVEAECDVVIIDTAHGHNRDVARAVEAAKKLSNSVQVIAGNVATAEATRSLIDAGADGVKIGIGPGSICTTR IVAGVGVPQLTAVMECAAEAEKSGVPVIADGGLRTSGDAAKALAAGASSVMIGSMLAGTEEAPGETFLYQGRAYKSYRGM GSVGAMARGSADRYFQQDIKDQMKLVPEGIEGQVPYKGPAKDVVHQLVGGIKAAMGYTGSPTIDDLRKRAQFVRITNAGL RESHVHDVTITREAPNYKVG >Mature_499_residues GRHESPRTQEVAPIMDIPLGLTFDDVLLRPAESDIVPSQADTRTRLTKGIGLNIPILSSAMDTVTEADMAIVMAQLGGIG VLHRNLSIEEQCAAVRAVKRFESGMVVNPITISPDAPLGEAQALMRQHKISGIPVVEASGKLVGILTNRDVRFADNPQQP VRELMTHENLATVKLGSSGDEARRLLHQRRIEKLLVVDDAFHCIGLITVKDIEKAVTFPNATKDAAGRLRVAAATTVGEK GLLRTQALVEAECDVVIIDTAHGHNRDVARAVEAAKKLSNSVQVIAGNVATAEATRSLIDAGADGVKIGIGPGSICTTRI VAGVGVPQLTAVMECAAEAEKSGVPVIADGGLRTSGDAAKALAAGASSVMIGSMLAGTEEAPGETFLYQGRAYKSYRGMG SVGAMARGSADRYFQQDIKDQMKLVPEGIEGQVPYKGPAKDVVHQLVGGIKAAMGYTGSPTIDDLRKRAQFVRITNAGLR ESHVHDVTITREAPNYKVG
Specific function: GMP biosynthesis from IMP; first step. [C]
COG id: COG0516
COG function: function code F; IMP dehydrogenase/GMP reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 CBS domains [H]
Homologues:
Organism=Homo sapiens, GI217035146, Length=455, Percent_Identity=40, Blast_Score=312, Evalue=5e-85, Organism=Homo sapiens, GI34328928, Length=455, Percent_Identity=40, Blast_Score=311, Evalue=1e-84, Organism=Homo sapiens, GI156616279, Length=455, Percent_Identity=40, Blast_Score=311, Evalue=1e-84, Organism=Homo sapiens, GI34328930, Length=455, Percent_Identity=40, Blast_Score=310, Evalue=1e-84, Organism=Homo sapiens, GI217035152, Length=476, Percent_Identity=38.4453781512605, Blast_Score=304, Evalue=1e-82, Organism=Homo sapiens, GI66933016, Length=481, Percent_Identity=38.045738045738, Blast_Score=301, Evalue=9e-82, Organism=Homo sapiens, GI217035148, Length=455, Percent_Identity=39.3406593406593, Blast_Score=300, Evalue=2e-81, Organism=Homo sapiens, GI217035150, Length=455, Percent_Identity=37.3626373626374, Blast_Score=275, Evalue=7e-74, Organism=Homo sapiens, GI50541954, Length=251, Percent_Identity=37.0517928286853, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI50541952, Length=251, Percent_Identity=37.0517928286853, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI50541948, Length=251, Percent_Identity=37.0517928286853, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI50541956, Length=251, Percent_Identity=37.0517928286853, Blast_Score=162, Evalue=8e-40, Organism=Homo sapiens, GI156104880, Length=250, Percent_Identity=36.4, Blast_Score=162, Evalue=1e-39, Organism=Escherichia coli, GI1788855, Length=480, Percent_Identity=57.5, Blast_Score=508, Evalue=1e-145, Organism=Escherichia coli, GI1786293, Length=223, Percent_Identity=39.4618834080717, Blast_Score=160, Evalue=2e-40, Organism=Caenorhabditis elegans, GI71994385, Length=509, Percent_Identity=34.5776031434185, Blast_Score=262, Evalue=3e-70, Organism=Caenorhabditis elegans, GI71994389, Length=431, Percent_Identity=36.8909512761021, Blast_Score=248, Evalue=4e-66, Organism=Caenorhabditis elegans, GI17560440, Length=277, Percent_Identity=34.6570397111913, Blast_Score=162, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6323585, Length=483, Percent_Identity=40.3726708074534, Blast_Score=326, Evalue=6e-90, Organism=Saccharomyces cerevisiae, GI6322012, Length=477, Percent_Identity=38.7840670859539, Blast_Score=312, Evalue=9e-86, Organism=Saccharomyces cerevisiae, GI6323464, Length=461, Percent_Identity=40.3470715835141, Blast_Score=307, Evalue=2e-84, Organism=Saccharomyces cerevisiae, GI6319352, Length=354, Percent_Identity=37.8531073446328, Blast_Score=231, Evalue=2e-61, Organism=Saccharomyces cerevisiae, GI6319353, Length=117, Percent_Identity=38.4615384615385, Blast_Score=75, Evalue=3e-14, Organism=Drosophila melanogaster, GI24641071, Length=480, Percent_Identity=38.3333333333333, Blast_Score=311, Evalue=5e-85, Organism=Drosophila melanogaster, GI24641073, Length=480, Percent_Identity=38.3333333333333, Blast_Score=311, Evalue=5e-85, Organism=Drosophila melanogaster, GI28571163, Length=439, Percent_Identity=38.496583143508, Blast_Score=280, Evalue=1e-75,
Paralogues:
None
Copy number: 600 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR000644 - InterPro: IPR005990 - InterPro: IPR018529 - InterPro: IPR015875 - InterPro: IPR001093 [H]
Pfam domain/function: PF00571 CBS; PF00478 IMPDH [H]
EC number: =1.1.1.205 [H]
Molecular weight: Translated: 52848; Mature: 52717
Theoretical pI: Translated: 7.11; Mature: 7.11
Prosite motif: PS00487 IMP_DH_GMP_RED
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGRHESPRTQEVAPIMDIPLGLTFDDVLLRPAESDIVPSQADTRTRLTKGIGLNIPILSS CCCCCCCCCCCCCCHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHH AMDTVTEADMAIVMAQLGGIGVLHRNLSIEEQCAAVRAVKRFESGMVVNPITISPDAPLG HHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCEECCEEECCCCCCH EAQALMRQHKISGIPVVEASGKLVGILTNRDVRFADNPQQPVRELMTHENLATVKLGSSG HHHHHHHHHCCCCCEEEECCCCEEEEEECCCEEECCCCHHHHHHHHHCCCEEEEEECCCC DEARRLLHQRRIEKLLVVDDAFHCIGLITVKDIEKAVTFPNATKDAAGRLRVAAATTVGE HHHHHHHHHHHHHHEEHCCCCHHHHEEEEHHHHHHHHCCCCCCCHHCCCEEEEEEHHCCC KGLLRTQALVEAECDVVIIDTAHGHNRDVARAVEAAKKLSNSVQVIAGNVATAEATRSLI CCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH DAGADGVKIGIGPGSICTTRIVAGVGVPQLTAVMECAAEAEKSGVPVIADGGLRTSGDAA HCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHH KALAAGASSVMIGSMLAGTEEAPGETFLYQGRAYKSYRGMGSVGAMARGSADRYFQQDIK HHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCCHHHHCCCCCCCHHHCCCHHHHHHHHHH DQMKLVPEGIEGQVPYKGPAKDVVHQLVGGIKAAMGYTGSPTIDDLRKRAQFVRITNAGL HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCC RESHVHDVTITREAPNYKVG CCCCCEEEEEEECCCCCCCC >Mature Secondary Structure GRHESPRTQEVAPIMDIPLGLTFDDVLLRPAESDIVPSQADTRTRLTKGIGLNIPILSS CCCCCCCCCCCCCHHCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHCCCCCCHHHHH AMDTVTEADMAIVMAQLGGIGVLHRNLSIEEQCAAVRAVKRFESGMVVNPITISPDAPLG HHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCCEECCEEECCCCCCH EAQALMRQHKISGIPVVEASGKLVGILTNRDVRFADNPQQPVRELMTHENLATVKLGSSG HHHHHHHHHCCCCCEEEECCCCEEEEEECCCEEECCCCHHHHHHHHHCCCEEEEEECCCC DEARRLLHQRRIEKLLVVDDAFHCIGLITVKDIEKAVTFPNATKDAAGRLRVAAATTVGE HHHHHHHHHHHHHHEEHCCCCHHHHEEEEHHHHHHHHCCCCCCCHHCCCEEEEEEHHCCC KGLLRTQALVEAECDVVIIDTAHGHNRDVARAVEAAKKLSNSVQVIAGNVATAEATRSLI CCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHH DAGADGVKIGIGPGSICTTRIVAGVGVPQLTAVMECAAEAEKSGVPVIADGGLRTSGDAA HCCCCCEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCHHH KALAAGASSVMIGSMLAGTEEAPGETFLYQGRAYKSYRGMGSVGAMARGSADRYFQQDIK HHHHCCCHHHHHHHHHCCCCCCCCCEEEECCCCHHHHCCCCCCCHHHCCCHHHHHHHHHH DQMKLVPEGIEGQVPYKGPAKDVVHQLVGGIKAAMGYTGSPTIDDLRKRAQFVRITNAGL HHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHEEEEECCCC RESHVHDVTITREAPNYKVG CCCCCEEEEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA