Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is iap [C]

Identifier: 87199768

GI number: 87199768

Start: 1845056

End: 1846600

Strand: Direct

Name: iap [C]

Synonym: Saro_1751

Alternate gene names: 87199768

Gene position: 1845056-1846600 (Clockwise)

Preceding gene: 87199767

Following gene: 87199769

Centisome position: 51.8

GC content: 69.26

Gene sequence:

>1545_bases
ATGAAGCGAGCCGGGTGCGGCAACAGGGGCGGCTTGCGAAAAACGATGACAGCGGCGCTTGTCATCGCGGCGCTGGCGCT
CGTCGCCGCAAGGCCCGCGCCGAGGAAGCCCACGCCGCTCGAGAACACGCTGAAGGTCCACGTCGAGACGCTGGCAAGCG
ACGATTTCGACGGGCGCGAACCTGGCACCGAGGGCGAAACCAAGACGTTGCGCTATCTGGCGCGGCAGTGGTTCGACATC
GGCATGGAGGCGGGCACGAACATCCCCGGCAGCGGATGGTTCGCTCCGGTGGAACTGGTCGAGCGCGAACCGCTGGTGTC
GCGGGCCAGCTTCGTGCGCGGGCGCAAGCGGGTCAGCCTGCCGGCCGACAGCGTTTTCGTGGTGACTTCCGGCCTGCGCA
GCCTTGTCCAGGACGCGCCCCTGCTGTTCGTCGGCCATGCAACGTCGCCTGGCGTTCCGCGGGCTGAGCTGGCGGGCCGG
GTGGCGGTCATGCTGGACAGCCAGGCAGCCGTTGGCGATCCTCAGCGGAGCAGCGACCGGGCCGGAAAGCTGCTGGATGC
GGGCGCACTGGCGGTCGTCACGATCCTCGATGGCGAACGCGGGATCGAAGACGTGATCGCGCGGCGGCGGCGAGCGGGCT
ACGCGATCGCCGGCGAGACGCTGGGCAACGAGATCGAGGCCTTCCTTTCGCCCGCCGCCGCGAACCTGCTGCTGGCCACT
TCCGCCCATCCCAATGTGGCGCGCCTGCGTGCCGATGCCGACGCACCGGGCTTTGCGCCCTACCTGCTAGGCATAACCGC
GACGTTCGAGGCGACGAGCCGCGAGACGCGGATCAAGACCCACAACCTCATCGGCCGGCTCCCGGGGCGCAACCCTGCGG
CCGGAGCGGTGCTGATGCTGGCGCACTGGGACCACTTCGGCGAATGCGCCGCGCCGCCCGCGGAGGACCTCATCTGCAAC
GGCGCGATCGACAACGCCTCCGGCCTGGCGGTGATGACCGAGACCGCGCGGCTGCTGTCGCGCGGGAGACCGATGGAGCG
TGACGTCTATTTCCTCGCGACCACGGGCGAGGAACTCGGCCTGCTTGGCGCCATGGCCTTTGCCGAGGACCCGCCGATCC
CGCTCGACCGTATCGTCGCGGCCTTCAACGTCGACAGCACCGGGCTGGTGCCGGCGGGGGCGCCAGTGGGAATCGTGGGC
AGGGGCATGACCCCGCTCGACCCGCTGATCGCGGACGTGGTGCGGCGGATGAAGCGCAAGCTCGCGCCCGGCGACGGGGC
GAACGCCTATATCCGCAGGCAGGATAGCTGGATCCTGATGCAGCACGACGTGCCGACGGTCATGGTCAGCAGCAGCTATG
GCAACATGGAACGCCTCGAACGGTTCATGGAAGACACCTATCACCGCCCGACCGACCAGGCCGGCGCGGGAATCGACTAT
GGCGGCATGGCCGACGACGTGCTGCTCCAGGCGGAACTGGTCCGCGCATTCGCCGATCCGAAGCGCTATCCGGGGGCCGG
ATCGAAGCGGGCCCAAACCCCCTAG

Upstream 100 bases:

>100_bases
GTCGTAAAGTTCTGTTCATCCGGCGCGGCCCAATTGGGAACTTGCGTCGGGCTCCGGGTTTTGAGAGCAAGGGCGTGCGA
CGAAGCGTTTGAGGACGGCG

Downstream 100 bases:

>100_bases
CGGAACCCGATCTTCCTGTTTACATGGGCCGCCACGAATCTCCCCGGACACAGGAAGTGGCGCCCATCATGGATATCCCT
CTCGGCCTTACCTTCGACGA

Product: peptidase M28

Products: NA

Alternate protein names: Aminopeptidase; Peptidase; M28 Family Peptidase; Aminopeptidase Family; Glutamate Carboxypeptidase II; M20/M25/M40 Family Peptidase

Number of amino acids: Translated: 514; Mature: 514

Protein sequence:

>514_residues
MKRAGCGNRGGLRKTMTAALVIAALALVAARPAPRKPTPLENTLKVHVETLASDDFDGREPGTEGETKTLRYLARQWFDI
GMEAGTNIPGSGWFAPVELVEREPLVSRASFVRGRKRVSLPADSVFVVTSGLRSLVQDAPLLFVGHATSPGVPRAELAGR
VAVMLDSQAAVGDPQRSSDRAGKLLDAGALAVVTILDGERGIEDVIARRRRAGYAIAGETLGNEIEAFLSPAAANLLLAT
SAHPNVARLRADADAPGFAPYLLGITATFEATSRETRIKTHNLIGRLPGRNPAAGAVLMLAHWDHFGECAAPPAEDLICN
GAIDNASGLAVMTETARLLSRGRPMERDVYFLATTGEELGLLGAMAFAEDPPIPLDRIVAAFNVDSTGLVPAGAPVGIVG
RGMTPLDPLIADVVRRMKRKLAPGDGANAYIRRQDSWILMQHDVPTVMVSSSYGNMERLERFMEDTYHRPTDQAGAGIDY
GGMADDVLLQAELVRAFADPKRYPGAGSKRAQTP

Sequences:

>Translated_514_residues
MKRAGCGNRGGLRKTMTAALVIAALALVAARPAPRKPTPLENTLKVHVETLASDDFDGREPGTEGETKTLRYLARQWFDI
GMEAGTNIPGSGWFAPVELVEREPLVSRASFVRGRKRVSLPADSVFVVTSGLRSLVQDAPLLFVGHATSPGVPRAELAGR
VAVMLDSQAAVGDPQRSSDRAGKLLDAGALAVVTILDGERGIEDVIARRRRAGYAIAGETLGNEIEAFLSPAAANLLLAT
SAHPNVARLRADADAPGFAPYLLGITATFEATSRETRIKTHNLIGRLPGRNPAAGAVLMLAHWDHFGECAAPPAEDLICN
GAIDNASGLAVMTETARLLSRGRPMERDVYFLATTGEELGLLGAMAFAEDPPIPLDRIVAAFNVDSTGLVPAGAPVGIVG
RGMTPLDPLIADVVRRMKRKLAPGDGANAYIRRQDSWILMQHDVPTVMVSSSYGNMERLERFMEDTYHRPTDQAGAGIDY
GGMADDVLLQAELVRAFADPKRYPGAGSKRAQTP
>Mature_514_residues
MKRAGCGNRGGLRKTMTAALVIAALALVAARPAPRKPTPLENTLKVHVETLASDDFDGREPGTEGETKTLRYLARQWFDI
GMEAGTNIPGSGWFAPVELVEREPLVSRASFVRGRKRVSLPADSVFVVTSGLRSLVQDAPLLFVGHATSPGVPRAELAGR
VAVMLDSQAAVGDPQRSSDRAGKLLDAGALAVVTILDGERGIEDVIARRRRAGYAIAGETLGNEIEAFLSPAAANLLLAT
SAHPNVARLRADADAPGFAPYLLGITATFEATSRETRIKTHNLIGRLPGRNPAAGAVLMLAHWDHFGECAAPPAEDLICN
GAIDNASGLAVMTETARLLSRGRPMERDVYFLATTGEELGLLGAMAFAEDPPIPLDRIVAAFNVDSTGLVPAGAPVGIVG
RGMTPLDPLIADVVRRMKRKLAPGDGANAYIRRQDSWILMQHDVPTVMVSSSYGNMERLERFMEDTYHRPTDQAGAGIDY
GGMADDVLLQAELVRAFADPKRYPGAGSKRAQTP

Specific function: This Protein, Presumably An Aminopeptidase, Mediates The Conversion Of E.Coli Alkaline Phosphatase Isozyme 1, To Isozymes 2 And 3 By Removing, One By One, The Two Amino-Terminal Arginine Residues. [C]

COG id: COG2234

COG function: function code R; Predicted aminopeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.4.11.- [C]

Molecular weight: Translated: 54733; Mature: 54733

Theoretical pI: Translated: 6.96; Mature: 6.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRAGCGNRGGLRKTMTAALVIAALALVAARPAPRKPTPLENTLKVHVETLASDDFDGRE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEHHHCCCCCCCCC
PGTEGETKTLRYLARQWFDIGMEAGTNIPGSGWFAPVELVEREPLVSRASFVRGRKRVSL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCEECC
PADSVFVVTSGLRSLVQDAPLLFVGHATSPGVPRAELAGRVAVMLDSQAAVGDPQRSSDR
CCCCEEHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCHH
AGKLLDAGALAVVTILDGERGIEDVIARRRRAGYAIAGETLGNEIEAFLSPAAANLLLAT
HCCHHCCCCEEEEEEECCCCCHHHHHHHHHHCCEEEECHHHHHHHHHHHCHHHHCEEEEE
SAHPNVARLRADADAPGFAPYLLGITATFEATSRETRIKTHNLIGRLPGRNPAAGAVLML
CCCCCCEEEEECCCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEE
AHWDHFGECAAPPAEDLICNGAIDNASGLAVMTETARLLSRGRPMERDVYFLATTGEELG
ECCCCCCCCCCCCHHHHEECCCCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCHHH
LLGAMAFAEDPPIPLDRIVAAFNVDSTGLVPAGAPVGIVGRGMTPLDPLIADVVRRMKRK
HHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHH
LAPGDGANAYIRRQDSWILMQHDVPTVMVSSSYGNMERLERFMEDTYHRPTDQAGAGIDY
CCCCCCCCCEEEECCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
GGMADDVLLQAELVRAFADPKRYPGAGSKRAQTP
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MKRAGCGNRGGLRKTMTAALVIAALALVAARPAPRKPTPLENTLKVHVETLASDDFDGRE
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHEEEEHHHCCCCCCCCC
PGTEGETKTLRYLARQWFDIGMEAGTNIPGSGWFAPVELVEREPLVSRASFVRGRKRVSL
CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCEECC
PADSVFVVTSGLRSLVQDAPLLFVGHATSPGVPRAELAGRVAVMLDSQAAVGDPQRSSDR
CCCCEEHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHCCEEEEEEECCCCCCCCCCCCHH
AGKLLDAGALAVVTILDGERGIEDVIARRRRAGYAIAGETLGNEIEAFLSPAAANLLLAT
HCCHHCCCCEEEEEEECCCCCHHHHHHHHHHCCEEEECHHHHHHHHHHHCHHHHCEEEEE
SAHPNVARLRADADAPGFAPYLLGITATFEATSRETRIKTHNLIGRLPGRNPAAGAVLML
CCCCCCEEEEECCCCCCCCHHHHEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCEEEEE
AHWDHFGECAAPPAEDLICNGAIDNASGLAVMTETARLLSRGRPMERDVYFLATTGEELG
ECCCCCCCCCCCCHHHHEECCCCCCCCCCEEHHHHHHHHHCCCCCCCCEEEEEECCCHHH
LLGAMAFAEDPPIPLDRIVAAFNVDSTGLVPAGAPVGIVGRGMTPLDPLIADVVRRMKRK
HHHHHHHCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHH
LAPGDGANAYIRRQDSWILMQHDVPTVMVSSSYGNMERLERFMEDTYHRPTDQAGAGIDY
CCCCCCCCCEEEECCCEEEEECCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
GGMADDVLLQAELVRAFADPKRYPGAGSKRAQTP
CCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Aminopeptidases [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA