| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199764
Identifier: 87199764
GI number: 87199764
Start: 1841531
End: 1842238
Strand: Direct
Name: 87199764
Synonym: Saro_1747
Alternate gene names: NA
Gene position: 1841531-1842238 (Clockwise)
Preceding gene: 87199763
Following gene: 87199767
Centisome position: 51.71
GC content: 67.09
Gene sequence:
>708_bases ATGATCGACACGAAACGCACCGCACGCTTCGCCCTGTTTGCCTCGGCGGCGCTTGCCTTGGCCGCAGCGGCTTCCGCCGC GCAGGGAACCGCCGATACGCCGCCGCCTGCGCCGCCTGCGCCTCCCGCCCCGCCTTCACCTCCGGCACCGCCCGCACCGC CGGCGATCCCAGAGATGGGCAGCCAGGTGGTCATCGTGGAACGGCAAGGCGACAAGGATGGCGCGGAACATGTCCGGACG GTTACGCGCGATGGCAAGACCTTCGTGTTCAAGACCGACAGGCCGCTGACCGACGCCGAGGTCGAGGCGCGGATCGCGCA GGTGGAGGCCGGCATCCCGCCTGTTCCTCCGGTGCCGCCGATGGCTGGCAAGGACGGCCATCGTGTCCAGCAGCGGGTGA TCGTGATCGACGGCAACACGCAAGGCGTGACTGACATCGTTTCCGAGACCGGCGATCACTGCAAGGGCAAGGCGATCGCG TCCGACGTCGATGCTTCCGAAGAGAAGGACGGCAAGGTCACGCGGGTGCGCATCCGCACTTGCGGCACGCCGGGCGAGAT CGAGAAGCACGCGATGGCCGAGGCGCTGGAAGGCGTCCGCGAGGCGCGTGAGCGGATTGCGCGCGACAAGTCGCTTTCAG ATTCGATCCGCAAGCAGGTTCTGGACGAACTTGATGCCGAGATTGCGAAGTTGAAGGCCAAGGGCTGA
Upstream 100 bases:
>100_bases GTCGAACACCGAATGAGCTTGCGCCGGGGTAGGAATACCCCGGCGCAATGCATTTGGGCCGCTGCCAGCCTGTGCGTGGC CCGTTCGGGGAGCCTGATTG
Downstream 100 bases:
>100_bases CGGGCGGAGGCAAGCCTTCCGCTGGGTCTTGGCCGGGGTTCCGGTACCGCAGAGGGCTGGGGCGGGAACCAGGAAGTCAG CCTCACCCCGGATCAAGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 235; Mature: 235
Protein sequence:
>235_residues MIDTKRTARFALFASAALALAAAASAAQGTADTPPPAPPAPPAPPSPPAPPAPPAIPEMGSQVVIVERQGDKDGAEHVRT VTRDGKTFVFKTDRPLTDAEVEARIAQVEAGIPPVPPVPPMAGKDGHRVQQRVIVIDGNTQGVTDIVSETGDHCKGKAIA SDVDASEEKDGKVTRVRIRTCGTPGEIEKHAMAEALEGVREARERIARDKSLSDSIRKQVLDELDAEIAKLKAKG
Sequences:
>Translated_235_residues MIDTKRTARFALFASAALALAAAASAAQGTADTPPPAPPAPPAPPSPPAPPAPPAIPEMGSQVVIVERQGDKDGAEHVRT VTRDGKTFVFKTDRPLTDAEVEARIAQVEAGIPPVPPVPPMAGKDGHRVQQRVIVIDGNTQGVTDIVSETGDHCKGKAIA SDVDASEEKDGKVTRVRIRTCGTPGEIEKHAMAEALEGVREARERIARDKSLSDSIRKQVLDELDAEIAKLKAKG >Mature_235_residues MIDTKRTARFALFASAALALAAAASAAQGTADTPPPAPPAPPAPPSPPAPPAPPAIPEMGSQVVIVERQGDKDGAEHVRT VTRDGKTFVFKTDRPLTDAEVEARIAQVEAGIPPVPPVPPMAGKDGHRVQQRVIVIDGNTQGVTDIVSETGDHCKGKAIA SDVDASEEKDGKVTRVRIRTCGTPGEIEKHAMAEALEGVREARERIARDKSLSDSIRKQVLDELDAEIAKLKAKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24702; Mature: 24702
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDTKRTARFALFASAALALAAAASAAQGTADTPPPAPPAPPAPPSPPAPPAPPAIPEMG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC SQVVIVERQGDKDGAEHVRTVTRDGKTFVFKTDRPLTDAEVEARIAQVEAGIPPVPPVPP CEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC MAGKDGHRVQQRVIVIDGNTQGVTDIVSETGDHCKGKAIASDVDASEEKDGKVTRVRIRT CCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEE CGTPGEIEKHAMAEALEGVREARERIARDKSLSDSIRKQVLDELDAEIAKLKAKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIDTKRTARFALFASAALALAAAASAAQGTADTPPPAPPAPPAPPSPPAPPAPPAIPEMG CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC SQVVIVERQGDKDGAEHVRTVTRDGKTFVFKTDRPLTDAEVEARIAQVEAGIPPVPPVPP CEEEEEECCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCC MAGKDGHRVQQRVIVIDGNTQGVTDIVSETGDHCKGKAIASDVDASEEKDGKVTRVRIRT CCCCCCCCEEEEEEEEECCCCCHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEEEEEE CGTPGEIEKHAMAEALEGVREARERIARDKSLSDSIRKQVLDELDAEIAKLKAKG CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA