| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199737
Identifier: 87199737
GI number: 87199737
Start: 1809217
End: 1810731
Strand: Direct
Name: 87199737
Synonym: Saro_1720
Alternate gene names: NA
Gene position: 1809217-1810731 (Clockwise)
Preceding gene: 87199736
Following gene: 87199739
Centisome position: 50.8
GC content: 67.59
Gene sequence:
>1515_bases GTGGCACCGGCCTTGCCGACTCTCGTGCGCTTCGCCAGAGCAACCGGCGTGAGCGCATCAATCGTCATCGGCGCCGACCG GTCCGGCGCCCCTGTCAGGATCGACGTCGAGGAGCTTCTTGCCACCCGCCTGCTGGTGCAGGGCAACAGCGGGTCGGGCA AGTCGCACCTGCTGCGCCGATTGCTGGAAGAAAGCGCCAGCATCGTCCAGCAGGTGGTGATCGACCCCGAGGGCGATTTC GTGACCCTCGCCGAACCTTTCGGCCATGTCGTGGTCGACGGTTCGGCTTATGACGGCGCTGAAATCGCCAAGCTGGCTGC TCGCATCCGCAAGCATCGCGCCTCGGTCATCCTCGCGCTCGACGGGCTCGAACTGGAAGCGCAGATGCGCTGCGCCGCCG TGTTCCTCAACACCCTGTTCGATGCCCCGCGCGACGAATGGTATCCGGCGCTGGTCGTGGTCGACGAAGCGCAGATGTTC GCCCCTGCCGCTGCCGGCGACGTTTCCGACGAAGTGCGCAGGCTCAGCCTCTCGGCCATGACCAATCTCATGTGCCGTGG GCGAAAGCGCGGGCTGGCCGGCGTGATCGCCACGCAGCGCCTGGCCAAGCTGGCCAAGAACGTCGCCGCCGAAGCGTCCA ACTTCCTGATGGGCCGCACTTTTCTCGATATCGACATGGCCCGCGCCGCCGACCTTCTCGGCATGGAGCGGCGCCAGGCC GAAGCGATCCGCGATCTGGAGCGCGGGCATTTCCTCGGCCTGGGCCCCGCCATTGCCCGCCGCCCCGTCGGCGTTCGCAT CGCGGACGTCCAGACGCATGCCCGAAACGTGGTGCAAGGGCTGATGCCGCTGCCCAATGCGGCAGGCGCAGAGATGGAAT CGATCCTCCTGTCCGAACCGCTGGCGATGGAACCTCCACCCCGCGCGCCGGAACCGGAAGCGCCGCCGGTTGAGAGCGGC GAATTGCTCGAACAGATCGAAGGCTTCGTGCCCGCAGCCGAACAGGTCGAGCCGCCGGTCGCTCCGAGCCTGTTCGAAGC CGAGGAAACCGCGGCGAGCATAGCGGGCATTCTTGCCGAAATGGCGGCCGAGCCCGATTGCACGTTCCAGCCGGCCTCGC AGCTCTACCAGGACTTCACCGTCCGCTGCCGCATGCTGCGCATCCTGCCGGGAATGGACCTCAACGCCTTCCGTCGCCGC TTCGCGATGGCGGTCGCGGGCATCTTCGACGACAAGGAGCCGCAGTGGCAGGACCTCCTGCGCATCGGCAAGGACGTGCC GGACGACCTGCTCGCGCCGTTCCTGACGCTCGCCCGCGCGGCGGTTGAGGGCGCGCCCTGTCCCGATGACGACCGTCTGG CCGAGATTTACGGCACCCGTTCGTCTGGCCGGATTCGTCGGCTGCTGGAACACCTCGAGAAGGGCAACCTCATCGTCGTG CGCACCGATTACGGCGGGCGGCGTTCGGTCGGCATTCCGGCGCTTGGGCTGACCACGGCGCCGGTGGAAGCCTGA
Upstream 100 bases:
>100_bases GGATCAGCATCCGGGCCGACCGGACGACAGCGCCAACCCGCTCTTCCGGCGCGGTGACGGGCTGACCTATCCCTGAGGTC CAAAAGGCCGGGGAAATTCC
Downstream 100 bases:
>100_bases CCCTTACTCGACGGTGTAGAAGTCGATCACCACGCTGTCGGGCTTGCGGATGCCGCGCGCCACGAAAACCTTGCGGCGCA GCCATTCGTACGGGCCGGCC
Product: ATPase
Products: NA
Alternate protein names: AAA ATPase; ATPase-Like Protein; GMP Reductase
Number of amino acids: Translated: 504; Mature: 503
Protein sequence:
>504_residues MAPALPTLVRFARATGVSASIVIGADRSGAPVRIDVEELLATRLLVQGNSGSGKSHLLRRLLEESASIVQQVVIDPEGDF VTLAEPFGHVVVDGSAYDGAEIAKLAARIRKHRASVILALDGLELEAQMRCAAVFLNTLFDAPRDEWYPALVVVDEAQMF APAAAGDVSDEVRRLSLSAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQA EAIRDLERGHFLGLGPAIARRPVGVRIADVQTHARNVVQGLMPLPNAAGAEMESILLSEPLAMEPPPRAPEPEAPPVESG ELLEQIEGFVPAAEQVEPPVAPSLFEAEETAASIAGILAEMAAEPDCTFQPASQLYQDFTVRCRMLRILPGMDLNAFRRR FAMAVAGIFDDKEPQWQDLLRIGKDVPDDLLAPFLTLARAAVEGAPCPDDDRLAEIYGTRSSGRIRRLLEHLEKGNLIVV RTDYGGRRSVGIPALGLTTAPVEA
Sequences:
>Translated_504_residues MAPALPTLVRFARATGVSASIVIGADRSGAPVRIDVEELLATRLLVQGNSGSGKSHLLRRLLEESASIVQQVVIDPEGDF VTLAEPFGHVVVDGSAYDGAEIAKLAARIRKHRASVILALDGLELEAQMRCAAVFLNTLFDAPRDEWYPALVVVDEAQMF APAAAGDVSDEVRRLSLSAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQA EAIRDLERGHFLGLGPAIARRPVGVRIADVQTHARNVVQGLMPLPNAAGAEMESILLSEPLAMEPPPRAPEPEAPPVESG ELLEQIEGFVPAAEQVEPPVAPSLFEAEETAASIAGILAEMAAEPDCTFQPASQLYQDFTVRCRMLRILPGMDLNAFRRR FAMAVAGIFDDKEPQWQDLLRIGKDVPDDLLAPFLTLARAAVEGAPCPDDDRLAEIYGTRSSGRIRRLLEHLEKGNLIVV RTDYGGRRSVGIPALGLTTAPVEA >Mature_503_residues APALPTLVRFARATGVSASIVIGADRSGAPVRIDVEELLATRLLVQGNSGSGKSHLLRRLLEESASIVQQVVIDPEGDFV TLAEPFGHVVVDGSAYDGAEIAKLAARIRKHRASVILALDGLELEAQMRCAAVFLNTLFDAPRDEWYPALVVVDEAQMFA PAAAGDVSDEVRRLSLSAMTNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQAE AIRDLERGHFLGLGPAIARRPVGVRIADVQTHARNVVQGLMPLPNAAGAEMESILLSEPLAMEPPPRAPEPEAPPVESGE LLEQIEGFVPAAEQVEPPVAPSLFEAEETAASIAGILAEMAAEPDCTFQPASQLYQDFTVRCRMLRILPGMDLNAFRRRF AMAVAGIFDDKEPQWQDLLRIGKDVPDDLLAPFLTLARAAVEGAPCPDDDRLAEIYGTRSSGRIRRLLEHLEKGNLIVVR TDYGGRRSVGIPALGLTTAPVEA
Specific function: Unknown
COG id: COG0433
COG function: function code R; Predicted ATPase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 54302; Mature: 54171
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAPALPTLVRFARATGVSASIVIGADRSGAPVRIDVEELLATRLLVQGNSGSGKSHLLRR CCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHEECCCCCCHHHHHHH LLEESASIVQQVVIDPEGDFVTLAEPFGHVVVDGSAYDGAEIAKLAARIRKHRASVILAL HHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHCEEEEEE DGLELEAQMRCAAVFLNTLFDAPRDEWYPALVVVDEAQMFAPAAAGDVSDEVRRLSLSAM CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHH TNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EAIRDLERGHFLGLGPAIARRPVGVRIADVQTHARNVVQGLMPLPNAAGAEMESILLSEP HHHHHHHCCCEEECCHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC LAMEPPPRAPEPEAPPVESGELLEQIEGFVPAAEQVEPPVAPSLFEAEETAASIAGILAE CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH MAAEPDCTFQPASQLYQDFTVRCRMLRILPGMDLNAFRRRFAMAVAGIFDDKEPQWQDLL HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH RIGKDVPDDLLAPFLTLARAAVEGAPCPDDDRLAEIYGTRSSGRIRRLLEHLEKGNLIVV HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEE RTDYGGRRSVGIPALGLTTAPVEA ECCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure APALPTLVRFARATGVSASIVIGADRSGAPVRIDVEELLATRLLVQGNSGSGKSHLLRR CCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEHHHHHHHHHHEECCCCCCHHHHHHH LLEESASIVQQVVIDPEGDFVTLAEPFGHVVVDGSAYDGAEIAKLAARIRKHRASVILAL HHHHHHHHHHHHHCCCCCCEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHHHCEEEEEE DGLELEAQMRCAAVFLNTLFDAPRDEWYPALVVVDEAQMFAPAAAGDVSDEVRRLSLSAM CCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECHHHHCCCCCCCHHHHHHHHHHHHH TNLMCRGRKRGLAGVIATQRLAKLAKNVAAEASNFLMGRTFLDIDMARAADLLGMERRQA HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EAIRDLERGHFLGLGPAIARRPVGVRIADVQTHARNVVQGLMPLPNAAGAEMESILLSEP HHHHHHHCCCEEECCHHHHCCCCCEEEEHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCC LAMEPPPRAPEPEAPPVESGELLEQIEGFVPAAEQVEPPVAPSLFEAEETAASIAGILAE CCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH MAAEPDCTFQPASQLYQDFTVRCRMLRILPGMDLNAFRRRFAMAVAGIFDDKEPQWQDLL HHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHH RIGKDVPDDLLAPFLTLARAAVEGAPCPDDDRLAEIYGTRSSGRIRRLLEHLEKGNLIVV HHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHCCCCEEEE RTDYGGRRSVGIPALGLTTAPVEA ECCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA