Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is bgxA [H]

Identifier: 87199736

GI number: 87199736

Start: 1807270

End: 1809192

Strand: Direct

Name: bgxA [H]

Synonym: Saro_1719

Alternate gene names: 87199736

Gene position: 1807270-1809192 (Clockwise)

Preceding gene: 87199735

Following gene: 87199737

Centisome position: 50.74

GC content: 67.6

Gene sequence:

>1923_bases
ATGGGCGGCTTGAAGATTTCTGCACCAATGGTGCTGCTTGCCGGTGTCGGGGCGGTCGCGCTGGGGGCATCCGCGTCGGC
AAGGCCCGCCTTTCGCGACCTGAACCACAATGGCCGGCTCGATCCATACGAGAACGTCGCGCTGCCGGTCGAACGGCGGC
TCGACGATCTGCTCAAGCGGATGACGCTGGAGGAAAAGGTCGCGCTCATGCTCCACGGAACGCTTCAGGCCGAAGGCGGA
CGCGGCATCGGGGTGGGCAATGCCTACGACACGGCCCTTGCGCAGGAACTCCTTGCGCGCGGGGTCAACAGTTTCATCAC
CCGCATCGCACCCGAACCCCGCGCCTTCGCGACGCAGAACAATGCGATCCAGCGGCTTGCCGAGGCGACCCGGCTCGGCA
TTCCCGCCACGATCAGCACCGATCCGCGCAATCACTTCCAGGTAGTGGTCGGCGCAAGCAGCGATGCCAGCGGCTTCTCC
AAATGGCCCGAGACGCTCGGCATGGCCGCCATCGGCGACGAGAAGCTGGTTGAGCGGTTCGGCCGACTGGTCGCCGCCGA
ATATCGCGCCGTCGGCATCCAGATGGCCCTGTCGCCACAGGCCGACCTCTATACCGAGCCACGCTGGCCGCGCGGCAACG
CGACGTTCGGCTCGGACCCGGCCACGGTCTCGCGTCTTGCCGGTGCATATGTGCGCGGGTTCCAGGGCGGCGCGGACGGA
CTCGTCCGCTCTGGCGTCGCGACCGTGGTCAAGCACTGGGTCGGCTATGGCGCCGAGCCCGAGGGCTTTGACGGCCACAA
CTATTACGGCCGCATCGCCCGTCTCGACAACGAAAGCTTCGCCCAGCACGTTGCCGCTTTCGAAGGCGCGCTCGCCGCGA
AGTCGGCAGGCGTAATGCCCACCTATGTCATCGCGGAGGGCGTGAGCATCGATGGCAAGCCGCTGCCGCAGGTCGGCGCG
GGCTTCAGCAAGCCTCTGATCGAGGGACTTCTGCGCGGCACCCACAAGTTCGGCGGCATCGTCATTTCCGACTGGGGCAT
CACCAACACCTGCCCCGAACAGTGCAGCAACCCGACGGCCGAAAAGCCCCAGGGCTTTGCGATCGCGATGCCGTGGGGCG
TCGAGGGTCTGTCCGAGGAAGACCGCTACGCGCTGGGCGCGAATGCCGGGATCGACCAGTTCGGCGGCGTCGACAATCCA
GGCCCTCTGCTTGCCGCCGTCCGTGCCGGGAAGGTTTCGCCCGCCCGGGTCGATCAGGCCGCCCGCCGCGTGCTTCGCCT
GAAGTTCGAGCTTGGCCTGTTCGACGATCCCTATGTCGACGTCGAGAAGGCAGCGCAGATCGTCGGCAACAAGGCGACGC
AGGCCGAGGCCGATGCAGCCCAGCGCGCCGCGCAGGTGCTGCTGTTGAACCGCAACGCGCTTCTGCCGCTCGCGCCGGGC
CGAAAGGTTTGGCTCTCCGGTGTCGACGCCAGTGCCGCGCGTGCTGCCGGGCTGGTCGTGGTGGACACCGCCGAACAGGC
CGAGGTGGCCATCGTTCGCGTTGCCACCCCGCACGAAGTCCTTCATCCTCACCACTTCTTCGGCTCGCGCCAGAACGAGG
GCCGCCTCGACTTCCGTGCTGGAGACGAGGCGACCAGAACCATCGCCGCTGCCGCTGCGCGCATCCCGACCGTTGTGGCC
GTCGACCTCGATCGTCCTGCCGTGCTGACCGAGGTGAAGGACAAGGCTACCGCGCTCTTCGGCCTGTTCGGCGCCAGCGA
TGCCGTGTTGCTGGATCTCGTCACCGGCAAGGCCCGGCCGGCGGGCAAGCTGCCGTTCGAACTGCCGTCCTCGGCAAAGG
CGGTCGAGGATCAGCATCCGGGCCGACCGGACGACAGCGCCAACCCGCTCTTCCGGCGCGGTGACGGGCTGACCTATCCC
TGA

Upstream 100 bases:

>100_bases
GGTGCAAAGGCTCCGTCGCCGCTTTTCACATGTGGCGATTGCCTTTGCGTCGTCAGGACGTTAGCGGTCTTGTCCTGCGT
TGTCATTCGGAGAGGAAACG

Downstream 100 bases:

>100_bases
GGTCCAAAAGGCCGGGGAAATTCCGTGGCACCGGCCTTGCCGACTCTCGTGCGCTTCGCCAGAGCAACCGGCGTGAGCGC
ATCAATCGTCATCGGCGCCG

Product: glycoside hydrolase family protein

Products: NA

Alternate protein names: Beta-glucosidase; Cellobiase; Gentiobiase; Beta-xylosidase; 1,4-beta-D-xylan xylohydrolase; Xylan 1,4-beta-xylosidase [H]

Number of amino acids: Translated: 640; Mature: 639

Protein sequence:

>640_residues
MGGLKISAPMVLLAGVGAVALGASASARPAFRDLNHNGRLDPYENVALPVERRLDDLLKRMTLEEKVALMLHGTLQAEGG
RGIGVGNAYDTALAQELLARGVNSFITRIAPEPRAFATQNNAIQRLAEATRLGIPATISTDPRNHFQVVVGASSDASGFS
KWPETLGMAAIGDEKLVERFGRLVAAEYRAVGIQMALSPQADLYTEPRWPRGNATFGSDPATVSRLAGAYVRGFQGGADG
LVRSGVATVVKHWVGYGAEPEGFDGHNYYGRIARLDNESFAQHVAAFEGALAAKSAGVMPTYVIAEGVSIDGKPLPQVGA
GFSKPLIEGLLRGTHKFGGIVISDWGITNTCPEQCSNPTAEKPQGFAIAMPWGVEGLSEEDRYALGANAGIDQFGGVDNP
GPLLAAVRAGKVSPARVDQAARRVLRLKFELGLFDDPYVDVEKAAQIVGNKATQAEADAAQRAAQVLLLNRNALLPLAPG
RKVWLSGVDASAARAAGLVVVDTAEQAEVAIVRVATPHEVLHPHHFFGSRQNEGRLDFRAGDEATRTIAAAAARIPTVVA
VDLDRPAVLTEVKDKATALFGLFGASDAVLLDLVTGKARPAGKLPFELPSSAKAVEDQHPGRPDDSANPLFRRGDGLTYP

Sequences:

>Translated_640_residues
MGGLKISAPMVLLAGVGAVALGASASARPAFRDLNHNGRLDPYENVALPVERRLDDLLKRMTLEEKVALMLHGTLQAEGG
RGIGVGNAYDTALAQELLARGVNSFITRIAPEPRAFATQNNAIQRLAEATRLGIPATISTDPRNHFQVVVGASSDASGFS
KWPETLGMAAIGDEKLVERFGRLVAAEYRAVGIQMALSPQADLYTEPRWPRGNATFGSDPATVSRLAGAYVRGFQGGADG
LVRSGVATVVKHWVGYGAEPEGFDGHNYYGRIARLDNESFAQHVAAFEGALAAKSAGVMPTYVIAEGVSIDGKPLPQVGA
GFSKPLIEGLLRGTHKFGGIVISDWGITNTCPEQCSNPTAEKPQGFAIAMPWGVEGLSEEDRYALGANAGIDQFGGVDNP
GPLLAAVRAGKVSPARVDQAARRVLRLKFELGLFDDPYVDVEKAAQIVGNKATQAEADAAQRAAQVLLLNRNALLPLAPG
RKVWLSGVDASAARAAGLVVVDTAEQAEVAIVRVATPHEVLHPHHFFGSRQNEGRLDFRAGDEATRTIAAAAARIPTVVA
VDLDRPAVLTEVKDKATALFGLFGASDAVLLDLVTGKARPAGKLPFELPSSAKAVEDQHPGRPDDSANPLFRRGDGLTYP
>Mature_639_residues
GGLKISAPMVLLAGVGAVALGASASARPAFRDLNHNGRLDPYENVALPVERRLDDLLKRMTLEEKVALMLHGTLQAEGGR
GIGVGNAYDTALAQELLARGVNSFITRIAPEPRAFATQNNAIQRLAEATRLGIPATISTDPRNHFQVVVGASSDASGFSK
WPETLGMAAIGDEKLVERFGRLVAAEYRAVGIQMALSPQADLYTEPRWPRGNATFGSDPATVSRLAGAYVRGFQGGADGL
VRSGVATVVKHWVGYGAEPEGFDGHNYYGRIARLDNESFAQHVAAFEGALAAKSAGVMPTYVIAEGVSIDGKPLPQVGAG
FSKPLIEGLLRGTHKFGGIVISDWGITNTCPEQCSNPTAEKPQGFAIAMPWGVEGLSEEDRYALGANAGIDQFGGVDNPG
PLLAAVRAGKVSPARVDQAARRVLRLKFELGLFDDPYVDVEKAAQIVGNKATQAEADAAQRAAQVLLLNRNALLPLAPGR
KVWLSGVDASAARAAGLVVVDTAEQAEVAIVRVATPHEVLHPHHFFGSRQNEGRLDFRAGDEATRTIAAAAARIPTVVAV
DLDRPAVLTEVKDKATALFGLFGASDAVLLDLVTGKARPAGKLPFELPSSAKAVEDQHPGRPDDSANPLFRRGDGLTYP

Specific function: Exhibits both beta-glucosidase and beta-xylosidase activities [H]

COG id: COG1472

COG function: function code G; Beta-glucosidase-related glycosidases

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 3 family [H]

Homologues:

Organism=Escherichia coli, GI1788453, Length=702, Percent_Identity=25.3561253561254, Blast_Score=119, Evalue=8e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002772
- InterPro:   IPR001764
- InterPro:   IPR017853 [H]

Pfam domain/function: PF00933 Glyco_hydro_3; PF01915 Glyco_hydro_3_C [H]

EC number: =3.2.1.21; =3.2.1.37 [H]

Molecular weight: Translated: 67530; Mature: 67399

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGGLKISAPMVLLAGVGAVALGASASARPAFRDLNHNGRLDPYENVALPVERRLDDLLKR
CCCCCCCCCHHHHHCCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
MTLEEKVALMLHGTLQAEGGRGIGVGNAYDTALAQELLARGVNSFITRIAPEPRAFATQN
HHHHHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCH
NAIQRLAEATRLGIPATISTDPRNHFQVVVGASSDASGFSKWPETLGMAAIGDEKLVERF
HHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHCCHHHHHHHH
GRLVAAEYRAVGIQMALSPQADLYTEPRWPRGNATFGSDPATVSRLAGAYVRGFQGGADG
HHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
LVRSGVATVVKHWVGYGAEPEGFDGHNYYGRIARLDNESFAQHVAAFEGALAAKSAGVMP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCE
TYVIAEGVSIDGKPLPQVGAGFSKPLIEGLLRGTHKFGGIVISDWGITNTCPEQCSNPTA
EEEEECCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHCCCCC
EKPQGFAIAMPWGVEGLSEEDRYALGANAGIDQFGGVDNPGPLLAAVRAGKVSPARVDQA
CCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCHHHHHHHCCCCCHHHHHHH
ARRVLRLKFELGLFDDPYVDVEKAAQIVGNKATQAEADAAQRAAQVLLLNRNALLPLAPG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCEEECCCC
RKVWLSGVDASAARAAGLVVVDTAEQAEVAIVRVATPHEVLHPHHFFGSRQNEGRLDFRA
CEEEEECCCCHHHHHCCEEEEECCCCCEEEEEEEECCHHHHCCHHHCCCCCCCCCEEECC
GDEATRTIAAAAARIPTVVAVDLDRPAVLTEVKDKATALFGLFGASDAVLLDLVTGKARP
CCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
AGKLPFELPSSAKAVEDQHPGRPDDSANPLFRRGDGLTYP
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHCCCCCCCCC
>Mature Secondary Structure 
GGLKISAPMVLLAGVGAVALGASASARPAFRDLNHNGRLDPYENVALPVERRLDDLLKR
CCCCCCCCHHHHHCCCHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHH
MTLEEKVALMLHGTLQAEGGRGIGVGNAYDTALAQELLARGVNSFITRIAPEPRAFATQN
HHHHHHHEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCH
NAIQRLAEATRLGIPATISTDPRNHFQVVVGASSDASGFSKWPETLGMAAIGDEKLVERF
HHHHHHHHHHHCCCCEEECCCCCCCEEEEEECCCCCCHHHHHHHHHCCHHCCHHHHHHHH
GRLVAAEYRAVGIQMALSPQADLYTEPRWPRGNATFGSDPATVSRLAGAYVRGFQGGADG
HHHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHH
LVRSGVATVVKHWVGYGAEPEGFDGHNYYGRIARLDNESFAQHVAAFEGALAAKSAGVMP
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCE
TYVIAEGVSIDGKPLPQVGAGFSKPLIEGLLRGTHKFGGIVISDWGITNTCPEQCSNPTA
EEEEECCCCCCCCCCCHHCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCHHHHCCCCC
EKPQGFAIAMPWGVEGLSEEDRYALGANAGIDQFGGVDNPGPLLAAVRAGKVSPARVDQA
CCCCCEEEECCCCCCCCCCCCCEEECCCCCHHHHCCCCCCCHHHHHHHCCCCCHHHHHHH
ARRVLRLKFELGLFDDPYVDVEKAAQIVGNKATQAEADAAQRAAQVLLLNRNALLPLAPG
HHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCEEECCCC
RKVWLSGVDASAARAAGLVVVDTAEQAEVAIVRVATPHEVLHPHHFFGSRQNEGRLDFRA
CEEEEECCCCHHHHHCCEEEEECCCCCEEEEEEEECCHHHHCCHHHCCCCCCCCCEEECC
GDEATRTIAAAAARIPTVVAVDLDRPAVLTEVKDKATALFGLFGASDAVLLDLVTGKARP
CCHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCC
AGKLPFELPSSAKAVEDQHPGRPDDSANPLFRRGDGLTYP
CCCCCCCCCCCCHHHHHCCCCCCCCCCCCHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7891660 [H]