Click here to switch to the map view.

The map label for this gene is 87199623

Identifier: 87199623

GI number: 87199623

Start: 1673271

End: 1674287

Strand: Direct

Name: 87199623

Synonym: Saro_1606

Alternate gene names: NA

Gene position: 1673271-1674287 (Clockwise)

Preceding gene: 87199622

Following gene: 87199624

Centisome position: 46.98

GC content: 66.76

Gene sequence:

>1017_bases
GTGTTGCCGGGGCCTGACACGCTGCCCGCGGTCGAGGAGATCGCGGTTGCCGAGCTTGGCGACCGCATCGCTTCGGTCCC
GCAACCCGTCGTGGTGCGCGGTCTGGTGCGAGACTGGCCGCTGGTTCAAGCCGGTCTGCGCTCCGCCCGGGAGGCGCGCG
ACTATCTTGCCCGCCATGCCCGCCCGGTTGACCTCCCGGTGAGCATCGCCGACCCCTCGCAGCGCGGCAGGCTGTTCTAC
GACGAGGCGATGGCGGTCAACTTCCGCATGGGGAAGGGCCGGTTGGCCGATATCCTCGCCGGTTTCGACAAGGCCGAGGG
TCGCAATGCGGACGAAGTGCCCACGGTCTACCTCGGCTCCATCGACATCCGTCGCTACTTCGATGGCCTGCACGAGGCCA
ATTCAGTCGATCTTGGCCGCGAGGATGCGCTCGCCTCGATCTGGATCGGCAACGCCACGCGCATCGCCGCGCACAACGAC
CATCCGCGCAATCTTGCCTGCTGCGTGGTAGGGCGCCGTCGCTTCACGCTGTTTCCGCCGGACCAGTTCGCAAATCTCTA
TCTCGGCCCGATCGACATCACCCCGGCCGGCCGGCCGGTATCGCTGGTCGATTTCGAAGCGCCGGACTTCGAGAGCCATC
CCCGATTTCGCGAAGCGCTTGCTCATGCGCGGGTGGCGGAACTTGAACCCGGCGACGCGGTGGTGATCCCGCCCTTGTGG
TATCACCATGTCGAGGCGAAGGCGCCATTCAACGTCCTCGTCAATTACTGGTGGCGCGATACGCCGCGCTATCTCGGCCA
GCCGCAAACCGCGCTGACCCACGCGATCATGGCCATCCGCGACCTGCCCGAGGACGAGCGCGCGATCTGGCGGGCGATGT
TCGAACACTATGTCTTTTCGGGCGGGGAGGCAGCCCGTGCACACGTCCCCGTCGAAGGCCAGGGCGTGCTCGCCCCGTTA
GGCGCCCGCGCGGCCGAGCGCCTGCATCAATTCCTGCTGAGGAGCCTTTCGCAATGA

Upstream 100 bases:

>100_bases
GCGCTGTCCGACCTCCAGTCGGGTGGGCACCTCCTGCCCCTGTTCATGGCGGTCGCATCCGTGGGCCGGTTCTCCGATCT
CGTCGCGCGCAAGAACCGCC

Downstream 100 bases:

>100_bases
AGCGTCCGAACCCCGCAGTCCCCGCCCTGCCGCGCCGCATCGTCATCGCCGGGGGCGGAACTGCCGGCTGGATGACCGCC
GCAGCGCTTGCCCGGACGCT

Product: hypothetical protein

Products: NA

Alternate protein names: Transcription Factor Jumonji Domain-Containing Protein; Transcription Factor Jumonji Jmjc Domain-Containing Protein; Transcription Factor Jumonji/Aspartyl Beta-Hydroxylase; Transcription Factor Jumonji JmjC Domain-Containing Protein; Transcription Factor Jumonji JmjC Domain Protein; PASs1-Like Protein; Transcription Factor Jumonji JmjC; Acetyltransferase; PASS1 Domain-Containing Protein; PASs1-Related Protein

Number of amino acids: Translated: 338; Mature: 338

Protein sequence:

>338_residues
MLPGPDTLPAVEEIAVAELGDRIASVPQPVVVRGLVRDWPLVQAGLRSAREARDYLARHARPVDLPVSIADPSQRGRLFY
DEAMAVNFRMGKGRLADILAGFDKAEGRNADEVPTVYLGSIDIRRYFDGLHEANSVDLGREDALASIWIGNATRIAAHND
HPRNLACCVVGRRRFTLFPPDQFANLYLGPIDITPAGRPVSLVDFEAPDFESHPRFREALAHARVAELEPGDAVVIPPLW
YHHVEAKAPFNVLVNYWWRDTPRYLGQPQTALTHAIMAIRDLPEDERAIWRAMFEHYVFSGGEAARAHVPVEGQGVLAPL
GARAAERLHQFLLRSLSQ

Sequences:

>Translated_338_residues
MLPGPDTLPAVEEIAVAELGDRIASVPQPVVVRGLVRDWPLVQAGLRSAREARDYLARHARPVDLPVSIADPSQRGRLFY
DEAMAVNFRMGKGRLADILAGFDKAEGRNADEVPTVYLGSIDIRRYFDGLHEANSVDLGREDALASIWIGNATRIAAHND
HPRNLACCVVGRRRFTLFPPDQFANLYLGPIDITPAGRPVSLVDFEAPDFESHPRFREALAHARVAELEPGDAVVIPPLW
YHHVEAKAPFNVLVNYWWRDTPRYLGQPQTALTHAIMAIRDLPEDERAIWRAMFEHYVFSGGEAARAHVPVEGQGVLAPL
GARAAERLHQFLLRSLSQ
>Mature_338_residues
MLPGPDTLPAVEEIAVAELGDRIASVPQPVVVRGLVRDWPLVQAGLRSAREARDYLARHARPVDLPVSIADPSQRGRLFY
DEAMAVNFRMGKGRLADILAGFDKAEGRNADEVPTVYLGSIDIRRYFDGLHEANSVDLGREDALASIWIGNATRIAAHND
HPRNLACCVVGRRRFTLFPPDQFANLYLGPIDITPAGRPVSLVDFEAPDFESHPRFREALAHARVAELEPGDAVVIPPLW
YHHVEAKAPFNVLVNYWWRDTPRYLGQPQTALTHAIMAIRDLPEDERAIWRAMFEHYVFSGGEAARAHVPVEGQGVLAPL
GARAAERLHQFLLRSLSQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI148596936, Length=134, Percent_Identity=37.3134328358209, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI21314714, Length=293, Percent_Identity=25.938566552901, Blast_Score=69, Evalue=6e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37600; Mature: 37600

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLPGPDTLPAVEEIAVAELGDRIASVPQPVVVRGLVRDWPLVQAGLRSAREARDYLARHA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
RPVDLPVSIADPSQRGRLFYDEAMAVNFRMGKGRLADILAGFDKAEGRNADEVPTVYLGS
CCCCCEEEECCCCCCCCEEEECEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEECC
IDIRRYFDGLHEANSVDLGREDALASIWIGNATRIAAHNDHPRNLACCVVGRRRFTLFPP
CHHHHHHHHHHCCCCCCCCCHHCEEEEEECCCEEEEECCCCCCCEEEEEECCCEEEECCC
DQFANLYLGPIDITPAGRPVSLVDFEAPDFESHPRFREALAHARVAELEPGDAVVIPPLW
HHHCCEEECCEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHH
YHHVEAKAPFNVLVNYWWRDTPRYLGQPQTALTHAIMAIRDLPEDERAIWRAMFEHYVFS
HHHCCCCCCHHHHEEHHCCCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GGEAARAHVPVEGQGVLAPLGARAAERLHQFLLRSLSQ
CCCCCEEECCCCCCCEEECCCHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLPGPDTLPAVEEIAVAELGDRIASVPQPVVVRGLVRDWPLVQAGLRSAREARDYLARHA
CCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCC
RPVDLPVSIADPSQRGRLFYDEAMAVNFRMGKGRLADILAGFDKAEGRNADEVPTVYLGS
CCCCCEEEECCCCCCCCEEEECEEEEEEECCCCHHHHHHHCCCCCCCCCCCCCCEEEECC
IDIRRYFDGLHEANSVDLGREDALASIWIGNATRIAAHNDHPRNLACCVVGRRRFTLFPP
CHHHHHHHHHHCCCCCCCCCHHCEEEEEECCCEEEEECCCCCCCEEEEEECCCEEEECCC
DQFANLYLGPIDITPAGRPVSLVDFEAPDFESHPRFREALAHARVAELEPGDAVVIPPLW
HHHCCEEECCEEECCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCHH
YHHVEAKAPFNVLVNYWWRDTPRYLGQPQTALTHAIMAIRDLPEDERAIWRAMFEHYVFS
HHHCCCCCCHHHHEEHHCCCCHHHCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHC
GGEAARAHVPVEGQGVLAPLGARAAERLHQFLLRSLSQ
CCCCCEEECCCCCCCEEECCCHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA