| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199622
Identifier: 87199622
GI number: 87199622
Start: 1672565
End: 1673287
Strand: Direct
Name: 87199622
Synonym: Saro_1605
Alternate gene names: NA
Gene position: 1672565-1673287 (Clockwise)
Preceding gene: 87199621
Following gene: 87199623
Centisome position: 46.96
GC content: 67.63
Gene sequence:
>723_bases ATGAGCCAGCACGCCGTCCTCGACAGCCTCTCCCACCGCGACCTGCGCGTCCGTACCGAGCGTTCCGCGGCGCTGGGCGA TGCGGTTATGGCCTGCCTTGTCATGCCGCAGGAGTTCCGCAAGGCACAGGCGCACTATCCCATCGTGTTCCGGCGCGATG CGGAGACCGGCCGCTTTTCCGCGCTCGCCCTGTTCGGGTTCGAGAACGGGGAGAACCTGTTCCTGGGCGAAAGCGGGTGG GATGCCGGCTATGTCCCGCTGGCCCATTCGATACAGCCCTTCCTGATCGGCCGGACCGCGATCGAGGACGAGACCCCGCA AGTTCACGTGGACTTTGCCAGCGCACGCATCGTGCAGGATCGCGAAGAGGGGGTGCGGCTGTTCGACGAGGCCGGTCAGC CGACCCCGTTGCTCGAGGAGGTGGCGCAGGACCTTGGCGACCTCGATGCCGCCTTCCGCGCCTCGCCGGCCTTCTTCGCA GCGCTCGAGCGGCACGATCTGCTCGAACCCTTCACGCTCGACGTCCCGCTCGATGATGGCTCGCGCCATTCGCTTGTCGG CTTCCACATCGTCAACGAGGAGCGCCTGCGCGCGCTCGATGGCGATGCGCTGTCCGACCTCCAGTCGGGTGGGCACCTCC TGCCCCTGTTCATGGCGGTCGCATCCGTGGGCCGGTTCTCCGATCTCGTCGCGCGCAAGAACCGCCGTGTTGCCGGGGCC TGA
Upstream 100 bases:
>100_bases ATGACGTGGCGCAGCGCACCCGCGCCTTGTGTGCCGCGCTGCCGACGAACCGCAGCTACCTGTCTTCCCTCATGCCCGCG CAAGGAGCCGCCGCCCTCCC
Downstream 100 bases:
>100_bases CACGCTGCCCGCGGTCGAGGAGATCGCGGTTGCCGAGCTTGGCGACCGCATCGCTTCGGTCCCGCAACCCGTCGTGGTGC GCGGTCTGGTGCGAGACTGG
Product: SapC
Products: NA
Alternate protein names: SapC Related Protein; SapC-Related Protein; SapC-Like Protein; SapC Protein; SapC Superfamily Protein; Sapc Family Protein
Number of amino acids: Translated: 240; Mature: 239
Protein sequence:
>240_residues MSQHAVLDSLSHRDLRVRTERSAALGDAVMACLVMPQEFRKAQAHYPIVFRRDAETGRFSALALFGFENGENLFLGESGW DAGYVPLAHSIQPFLIGRTAIEDETPQVHVDFASARIVQDREEGVRLFDEAGQPTPLLEEVAQDLGDLDAAFRASPAFFA ALERHDLLEPFTLDVPLDDGSRHSLVGFHIVNEERLRALDGDALSDLQSGGHLLPLFMAVASVGRFSDLVARKNRRVAGA
Sequences:
>Translated_240_residues MSQHAVLDSLSHRDLRVRTERSAALGDAVMACLVMPQEFRKAQAHYPIVFRRDAETGRFSALALFGFENGENLFLGESGW DAGYVPLAHSIQPFLIGRTAIEDETPQVHVDFASARIVQDREEGVRLFDEAGQPTPLLEEVAQDLGDLDAAFRASPAFFA ALERHDLLEPFTLDVPLDDGSRHSLVGFHIVNEERLRALDGDALSDLQSGGHLLPLFMAVASVGRFSDLVARKNRRVAGA >Mature_239_residues SQHAVLDSLSHRDLRVRTERSAALGDAVMACLVMPQEFRKAQAHYPIVFRRDAETGRFSALALFGFENGENLFLGESGWD AGYVPLAHSIQPFLIGRTAIEDETPQVHVDFASARIVQDREEGVRLFDEAGQPTPLLEEVAQDLGDLDAAFRASPAFFAA LERHDLLEPFTLDVPLDDGSRHSLVGFHIVNEERLRALDGDALSDLQSGGHLLPLFMAVASVGRFSDLVARKNRRVAGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26389; Mature: 26258
Theoretical pI: Translated: 4.79; Mature: 4.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQHAVLDSLSHRDLRVRTERSAALGDAVMACLVMPQEFRKAQAHYPIVFRRDAETGRFS CCCHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCCCEE ALALFGFENGENLFLGESGWDAGYVPLAHSIQPFLIGRTAIEDETPQVHVDFASARIVQD EEEEEEECCCCEEEEECCCCCCCCCCHHHCCCHHEECCHHCCCCCCEEEEEHHHHHHHHC REEGVRLFDEAGQPTPLLEEVAQDLGDLDAAFRASPAFFAALERHDLLEPFTLDVPLDDG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCC SRHSLVGFHIVNEERLRALDGDALSDLQSGGHLLPLFMAVASVGRFSDLVARKNRRVAGA CCCEEEEEEEECHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure SQHAVLDSLSHRDLRVRTERSAALGDAVMACLVMPQEFRKAQAHYPIVFRRDAETGRFS CCHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHCCHHHHHHCCCCCEEEEECCCCCCEE ALALFGFENGENLFLGESGWDAGYVPLAHSIQPFLIGRTAIEDETPQVHVDFASARIVQD EEEEEEECCCCEEEEECCCCCCCCCCHHHCCCHHEECCHHCCCCCCEEEEEHHHHHHHHC REEGVRLFDEAGQPTPLLEEVAQDLGDLDAAFRASPAFFAALERHDLLEPFTLDVPLDDG HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCEEEEEECCCC SRHSLVGFHIVNEERLRALDGDALSDLQSGGHLLPLFMAVASVGRFSDLVARKNRRVAGA CCCEEEEEEEECHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA