Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is 87199621

Identifier: 87199621

GI number: 87199621

Start: 1671027

End: 1672568

Strand: Direct

Name: 87199621

Synonym: Saro_1604

Alternate gene names: NA

Gene position: 1671027-1672568 (Clockwise)

Preceding gene: 87199620

Following gene: 87199622

Centisome position: 46.92

GC content: 67.38

Gene sequence:

>1542_bases
ATGGACGAGGGTGAGGTCAGGCGGATCGTGATCGTCGGCGGCGGGACCGCCGGCTGGCTGTCGGCCTGCTTCCTTGCCGC
GGAATTGCGTTCGCGCAGGGTCGACGTCTCGATAACCCTGATCGAGGCACCCGACATTCCCACGATCGGCGTGGGCGAGG
GGACCTGGCCGACGATGCGCGGTACCTTGCGCGCCATCGGCATCGCAGAGGACAATTTCCTTGCCGCCTGCGATGCCTCG
TTCAAACAGGGATCGGTCTTCTCCGGTTGGGTCACCGGAGAGCCGGGGGACCGGTACCAGCATCCGTTCACGCCACCACC
CGCCGGGGCGCTCGACGACATCGTCGCGGCCTGGGCGGGCAGGGGCGACCAGCCTTTCGCAAGCGCAATGACCGCGCAGG
CGGCGGTGATCGACCGGGACCTTGCGCCGCGCCAGCCGAACATGCCGTTCTATGCCGGCGCCCTGAACTACGCCTACCAC
CTCGACGCCGGAAAGTTCGCCGCACTTCTTTCCTCCCGTGCGACCGGACACCTTGGCGTCACCCACGTCCGCGATCGTGT
CCGCAACACGGTCGCGGACGACAGGGGGCATCTGCTGGCGGTGGAACTGGCCTCTGGCGACCGGGTCGAGGGCGATCTCT
TCATCGATTGTTCGGGCCATGCCGCGCTGCTGATTGGCGGCGCCTGCGGCGTCCCCTTCATTGACCGCAGCGACGTCCTG
CTCAATGATCGCGCGCTCGCGGCGCAAGTGTCCGTGCAGCCGGGCACGCCGGTAGCTTCTGCCACCGTCGCAACCGCACA
CCGCGCCGGCTGGCTGTGGGACATCGGGCTTCCCGGCAGGCGCGGCATCGGCTGCGTCTATTCATCCCGCTTCCTGTCCG
ACGACGATGCGCTGGCAGTGCTGCGCGCCTATGTCTCGGCAAACGTCCCGGGCGCAGATCCTGCGGCGGTAGAGCCTCGG
CGCATCGCCTTTCCGACCGGGCACAGGGAGCGTTTCTGGCATGGCAACTGCATCGCCATTGGCCTTTCGGCGGGCTTTCT
CGAACCGCTCGAGGCCTCGGCCATCGTGATGATCGAGCTTTCACTCCGAGCGCTGGCCGAGAATTTCCCCCGCCAGCGCC
AGGCCATGCCGTTCCTCGCCGGCCGCTTCAACGACCTGTTTCGCTATCGCTGGGACCGGGTGATCGAGTTCCTCAAGCTT
CACTACCTGCTCTCGAAGCGGCAGGAGCCCTACTGGCAGGCACAGCGCGATCCGGCCGCTGTGCCGCAGAGGTTGGCCGA
ACTTGTCGCGCTCTGGCGTCACCAGCCGCCGAGCGCATGGGATTTCCCGCAGGTGGACGAGATATTCTCGGCCGAGAGCC
ATGCCTACATTCTCTATGGCATGGGCTTTCCACCGCCTGCCTCCACCGCGCGCGATCCGCTTGCCGCCCGCGCGCTAGAT
GACGTGGCGCAGCGCACCCGCGCCTTGTGTGCCGCGCTGCCGACGAACCGCAGCTACCTGTCTTCCCTCATGCCCGCGCA
AGGAGCCGCCGCCCTCCCATGA

Upstream 100 bases:

>100_bases
GGACGGGTTGATAACGTTCCTGCGGAGTGGGAGAAGGTCGGACCGGTGGTCCGGCCAATCCTGCCGGACAACCGGCACAA
CGATAAAGTGACTATGGGCG

Downstream 100 bases:

>100_bases
GCCAGCACGCCGTCCTCGACAGCCTCTCCCACCGCGACCTGCGCGTCCGTACCGAGCGTTCCGCGGCGCTGGGCGATGCG
GTTATGGCCTGCCTTGTCAT

Product: tryptophan halogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 513; Mature: 513

Protein sequence:

>513_residues
MDEGEVRRIVIVGGGTAGWLSACFLAAELRSRRVDVSITLIEAPDIPTIGVGEGTWPTMRGTLRAIGIAEDNFLAACDAS
FKQGSVFSGWVTGEPGDRYQHPFTPPPAGALDDIVAAWAGRGDQPFASAMTAQAAVIDRDLAPRQPNMPFYAGALNYAYH
LDAGKFAALLSSRATGHLGVTHVRDRVRNTVADDRGHLLAVELASGDRVEGDLFIDCSGHAALLIGGACGVPFIDRSDVL
LNDRALAAQVSVQPGTPVASATVATAHRAGWLWDIGLPGRRGIGCVYSSRFLSDDDALAVLRAYVSANVPGADPAAVEPR
RIAFPTGHRERFWHGNCIAIGLSAGFLEPLEASAIVMIELSLRALAENFPRQRQAMPFLAGRFNDLFRYRWDRVIEFLKL
HYLLSKRQEPYWQAQRDPAAVPQRLAELVALWRHQPPSAWDFPQVDEIFSAESHAYILYGMGFPPPASTARDPLAARALD
DVAQRTRALCAALPTNRSYLSSLMPAQGAAALP

Sequences:

>Translated_513_residues
MDEGEVRRIVIVGGGTAGWLSACFLAAELRSRRVDVSITLIEAPDIPTIGVGEGTWPTMRGTLRAIGIAEDNFLAACDAS
FKQGSVFSGWVTGEPGDRYQHPFTPPPAGALDDIVAAWAGRGDQPFASAMTAQAAVIDRDLAPRQPNMPFYAGALNYAYH
LDAGKFAALLSSRATGHLGVTHVRDRVRNTVADDRGHLLAVELASGDRVEGDLFIDCSGHAALLIGGACGVPFIDRSDVL
LNDRALAAQVSVQPGTPVASATVATAHRAGWLWDIGLPGRRGIGCVYSSRFLSDDDALAVLRAYVSANVPGADPAAVEPR
RIAFPTGHRERFWHGNCIAIGLSAGFLEPLEASAIVMIELSLRALAENFPRQRQAMPFLAGRFNDLFRYRWDRVIEFLKL
HYLLSKRQEPYWQAQRDPAAVPQRLAELVALWRHQPPSAWDFPQVDEIFSAESHAYILYGMGFPPPASTARDPLAARALD
DVAQRTRALCAALPTNRSYLSSLMPAQGAAALP
>Mature_513_residues
MDEGEVRRIVIVGGGTAGWLSACFLAAELRSRRVDVSITLIEAPDIPTIGVGEGTWPTMRGTLRAIGIAEDNFLAACDAS
FKQGSVFSGWVTGEPGDRYQHPFTPPPAGALDDIVAAWAGRGDQPFASAMTAQAAVIDRDLAPRQPNMPFYAGALNYAYH
LDAGKFAALLSSRATGHLGVTHVRDRVRNTVADDRGHLLAVELASGDRVEGDLFIDCSGHAALLIGGACGVPFIDRSDVL
LNDRALAAQVSVQPGTPVASATVATAHRAGWLWDIGLPGRRGIGCVYSSRFLSDDDALAVLRAYVSANVPGADPAAVEPR
RIAFPTGHRERFWHGNCIAIGLSAGFLEPLEASAIVMIELSLRALAENFPRQRQAMPFLAGRFNDLFRYRWDRVIEFLKL
HYLLSKRQEPYWQAQRDPAAVPQRLAELVALWRHQPPSAWDFPQVDEIFSAESHAYILYGMGFPPPASTARDPLAARALD
DVAQRTRALCAALPTNRSYLSSLMPAQGAAALP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006905 [H]

Pfam domain/function: PF04820 Trp_halogenase [H]

EC number: NA

Molecular weight: Translated: 55422; Mature: 55422

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEGEVRRIVIVGGGTAGWLSACFLAAELRSRRVDVSITLIEAPDIPTIGVGEGTWPTMR
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCEECCCCCCCCHHH
GTLRAIGIAEDNFLAACDASFKQGSVFSGWVTGEPGDRYQHPFTPPPAGALDDIVAAWAG
CCEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCC
RGDQPFASAMTAQAAVIDRDLAPRQPNMPFYAGALNYAYHLDAGKFAALLSSRATGHLGV
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHCCCCCCCCH
THVRDRVRNTVADDRGHLLAVELASGDRVEGDLFIDCSGHAALLIGGACGVPFIDRSDVL
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCEE
LNDRALAAQVSVQPGTPVASATVATAHRAGWLWDIGLPGRRGIGCVYSSRFLSDDDALAV
ECCCEEEEEEEECCCCCCCHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHH
LRAYVSANVPGADPAAVEPRRIAFPTGHRERFWHGNCIAIGLSAGFLEPLEASAIVMIEL
HHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEECCCEEEEEECCCCCCCCCCCEEEEEEE
SLRALAENFPRQRQAMPFLAGRFNDLFRYRWDRVIEFLKLHYLLSKRQEPYWQAQRDPAA
HHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHH
VPQRLAELVALWRHQPPSAWDFPQVDEIFSAESHAYILYGMGFPPPASTARDPLAARALD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHH
DVAQRTRALCAALPTNRSYLSSLMPAQGAAALP
HHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MDEGEVRRIVIVGGGTAGWLSACFLAAELRSRRVDVSITLIEAPDIPTIGVGEGTWPTMR
CCCCCEEEEEEECCCCHHHHHHHHHHHHHHHCEEEEEEEEEECCCCCEECCCCCCCCHHH
GTLRAIGIAEDNFLAACDASFKQGSVFSGWVTGEPGDRYQHPFTPPPAGALDDIVAAWAG
CCEEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHCC
RGDQPFASAMTAQAAVIDRDLAPRQPNMPFYAGALNYAYHLDAGKFAALLSSRATGHLGV
CCCCCHHHHHHHHHHHHHCCCCCCCCCCCEEECCCCEEEEECCHHHHHHHHCCCCCCCCH
THVRDRVRNTVADDRGHLLAVELASGDRVEGDLFIDCSGHAALLIGGACGVPFIDRSDVL
HHHHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCEEEEEECCCCCCCCCCCCEE
LNDRALAAQVSVQPGTPVASATVATAHRAGWLWDIGLPGRRGIGCVYSSRFLSDDDALAV
ECCCEEEEEEEECCCCCCCHHHHHHHHCCCEEEECCCCCCCCCEEEECCCCCCCCHHHHH
LRAYVSANVPGADPAAVEPRRIAFPTGHRERFWHGNCIAIGLSAGFLEPLEASAIVMIEL
HHHHHHCCCCCCCCCCCCCCEEECCCCCCCCEECCCEEEEEECCCCCCCCCCCEEEEEEE
SLRALAENFPRQRQAMPFLAGRFNDLFRYRWDRVIEFLKLHYLLSKRQEPYWQAQRDPAA
HHHHHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHCCCCHHH
VPQRLAELVALWRHQPPSAWDFPQVDEIFSAESHAYILYGMGFPPPASTARDPLAARALD
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCCEEEEEECCCCCCCCCCCCHHHHHHHH
DVAQRTRALCAALPTNRSYLSSLMPAQGAAALP
HHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]