The gene/protein map for CP001642 is currently unavailable.
Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

Click here to switch to the map view.

The map label for this gene is 87199587

Identifier: 87199587

GI number: 87199587

Start: 1628053

End: 1628577

Strand: Direct

Name: 87199587

Synonym: Saro_1570

Alternate gene names: NA

Gene position: 1628053-1628577 (Clockwise)

Preceding gene: 87199586

Following gene: 87199588

Centisome position: 45.71

GC content: 65.9

Gene sequence:

>525_bases
ATGACCAGCGTGATGCTCGGAACCATCGAGGAACTGGTCGCACGCGAGCGCATTCGCGACTGCCTCTACCGCTATTGCCG
CGGGATCGACCGGGCCGATGAGGCCATGCTTCGTTCGGCGTACTGGCCCGATGGCACCGATGCCCACGGCCCCTACAACG
GCAGTGCCGAAGGCTTCATCGAATGGGCGATGAAGACCTTGCCGCACATTGAACGCGGCATCCACCAGATCCACAACGTG
TTGATCGAGTTTCGCGAAGGCGGCGCGGCGGTGGAAAGCTATTTCTCTGCCTTCCAGCGCCAGCCCGGTGCCGACGGCCG
GCTGACCCAGTGGGACATGAAGGGCCGCTATCTCGACTGGTTCGTCGAGCGCGCGGGCGAATGGCGCGTGCTCAACCGTC
TCGTCGTGTTCGACTGGGTCGAGGAAATGCCCCTTCCGCCCGGCACCGAGGACGAGCGCTTCGGGGCGCGCAAGCCCGTC
GGCGGACGCTGGCCGGACGATCCGGTCTACGCCGTCCGGGCCTGA

Upstream 100 bases:

>100_bases
GCTTCAGCGACGAATTGATTGTCAGCCATCATCTGAAACGGCAGATGATGCTTGCGATCGCGCACGGCTCGGTCGACCAC
TACAGAACGAGGTTTGCCGC

Downstream 100 bases:

>100_bases
CCCCAGCCTGATCCGGTCATGACGGAAGCCTTCCCCGCGTTGGTCCGCCAGGACGATGCACGTTATGCGATCACGGTCGG
GCCGGACCTTGCGGTAGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 174; Mature: 173

Protein sequence:

>174_residues
MTSVMLGTIEELVARERIRDCLYRYCRGIDRADEAMLRSAYWPDGTDAHGPYNGSAEGFIEWAMKTLPHIERGIHQIHNV
LIEFREGGAAVESYFSAFQRQPGADGRLTQWDMKGRYLDWFVERAGEWRVLNRLVVFDWVEEMPLPPGTEDERFGARKPV
GGRWPDDPVYAVRA

Sequences:

>Translated_174_residues
MTSVMLGTIEELVARERIRDCLYRYCRGIDRADEAMLRSAYWPDGTDAHGPYNGSAEGFIEWAMKTLPHIERGIHQIHNV
LIEFREGGAAVESYFSAFQRQPGADGRLTQWDMKGRYLDWFVERAGEWRVLNRLVVFDWVEEMPLPPGTEDERFGARKPV
GGRWPDDPVYAVRA
>Mature_173_residues
TSVMLGTIEELVARERIRDCLYRYCRGIDRADEAMLRSAYWPDGTDAHGPYNGSAEGFIEWAMKTLPHIERGIHQIHNVL
IEFREGGAAVESYFSAFQRQPGADGRLTQWDMKGRYLDWFVERAGEWRVLNRLVVFDWVEEMPLPPGTEDERFGARKPVG
GRWPDDPVYAVRA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20079; Mature: 19948

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSVMLGTIEELVARERIRDCLYRYCRGIDRADEAMLRSAYWPDGTDAHGPYNGSAEGFI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
EWAMKTLPHIERGIHQIHNVLIEFREGGAAVESYFSAFQRQPGADGRLTQWDMKGRYLDW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHH
FVERAGEWRVLNRLVVFDWVEEMPLPPGTEDERFGARKPVGGRWPDDPVYAVRA
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC
>Mature Secondary Structure 
TSVMLGTIEELVARERIRDCLYRYCRGIDRADEAMLRSAYWPDGTDAHGPYNGSAEGFI
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCCCCCCCCCCCHHHHH
EWAMKTLPHIERGIHQIHNVLIEFREGGAAVESYFSAFQRQPGADGRLTQWDMKGRYLDW
HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCEECCCCCHHHHH
FVERAGEWRVLNRLVVFDWVEEMPLPPGTEDERFGARKPVGGRWPDDPVYAVRA
HHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8796346; 9163424 [H]