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The map label for this gene is yngJ [H]

Identifier: 87199586

GI number: 87199586

Start: 1626947

End: 1628056

Strand: Direct

Name: yngJ [H]

Synonym: Saro_1569

Alternate gene names: 87199586

Gene position: 1626947-1628056 (Clockwise)

Preceding gene: 87199585

Following gene: 87199587

Centisome position: 45.68

GC content: 65.77

Gene sequence:

>1110_bases
ATGCGCTTCACCTATTCAGACGAGCAGGCAATGCTGCTCGACAGCGTCGACCGCTTCGGCGCCGAGCAGTTCCCTCCCGC
GGATCGTCACCACTTGGTCCAGCAGGGCCGTAGTGCCGAAACCGCCAAGTGGGCGATGATGGCTGAACTCGGCTGGTTGC
TCCTGCCCATCCCCGAGGAATGCGGGGGCCTTGGCGGCGGCGTGGTAGAACTCATGGCGCTGGGCGAAGGCTTCGGTCGC
CACCTTGTGCCCGGTGCCTATGTCGCCAGCAGCGTCCTTGCGTCAGCGCTGCTGGCCCATGGCGGCGAAGCGATGCATGG
CCTGATCGGCCAGCTCGGGGCGGGCGAGGCGATTGCCGCAGCGGCGCTTCTCGAAGACGATGGCAGCTATGATCTGCACC
ATGTTGCCGCGACCGCCCAAGGCGCCGGAGGCGACTGGACTCTGACCGGCGCCAAATGCCATGTCGAGGACGGCGGCGAT
GCGGACTGGTTCATCGTTCCCGCGCGCACGTCGGGCGGCGTCGCGGACCGCGATGGTATTTCCCTCTTTCTCGTTCCCGC
CGATGCGCCGGGCCTCAAGGTCGAACGCTTCCGTGCGATCGACGGCCATCGTCACGCACGGCTTACGCTCGAAGGCACGA
CGGCGCAGGCTTTCGGCCCGTTGGGCGAAGCCCTGCCCTTGATCGAGGCTGCCGTTGCCCGCGCCAACTGCGCGCTTCTC
GCCGAAGCCGTAGGCTCGATGGAGGCAGTCAGCGCGATCACGCTGGAATACCTGCGCACGCGTGAACAGTTCGGGCGACC
GATCGGCACTTTCCAGGTCCTGCAGCATCGCATGGTCGACATGCGCATCGCTTGCGAAGAAGCGCGCGCCATGCTTTGCC
ACGTCGCAATGGCCATCCCCAAGGGCGAGGCGGCGTTCCAGCGCGCGGTTTCGGCGGCCAAGGTGCGGATCGGCGAATGC
GGCGTCTATGTCGGCCAACAGGCCGTGCAGTTGCACGGCGGCGTCGGCTTCAGCGACGAATTGATTGTCAGCCATCATCT
GAAACGGCAGATGATGCTTGCGATCGCGCACGGCTCGGTCGACCACTACAGAACGAGGTTTGCCGCATGA

Upstream 100 bases:

>100_bases
TGCTCCATTCCCGCGTGACCTCGATCTATGGCGGATCGAGCGAGATCCAGCACAACATCATCGCCCAGCGTGCGCTGGGC
CTGAAGGGATAAGCTTCGCG

Downstream 100 bases:

>100_bases
CCAGCGTGATGCTCGGAACCATCGAGGAACTGGTCGCACGCGAGCGCATTCGCGACTGCCTCTACCGCTATTGCCGCGGG
ATCGACCGGGCCGATGAGGC

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MRFTYSDEQAMLLDSVDRFGAEQFPPADRHHLVQQGRSAETAKWAMMAELGWLLLPIPEECGGLGGGVVELMALGEGFGR
HLVPGAYVASSVLASALLAHGGEAMHGLIGQLGAGEAIAAAALLEDDGSYDLHHVAATAQGAGGDWTLTGAKCHVEDGGD
ADWFIVPARTSGGVADRDGISLFLVPADAPGLKVERFRAIDGHRHARLTLEGTTAQAFGPLGEALPLIEAAVARANCALL
AEAVGSMEAVSAITLEYLRTREQFGRPIGTFQVLQHRMVDMRIACEEARAMLCHVAMAIPKGEAAFQRAVSAAKVRIGEC
GVYVGQQAVQLHGGVGFSDELIVSHHLKRQMMLAIAHGSVDHYRTRFAA

Sequences:

>Translated_369_residues
MRFTYSDEQAMLLDSVDRFGAEQFPPADRHHLVQQGRSAETAKWAMMAELGWLLLPIPEECGGLGGGVVELMALGEGFGR
HLVPGAYVASSVLASALLAHGGEAMHGLIGQLGAGEAIAAAALLEDDGSYDLHHVAATAQGAGGDWTLTGAKCHVEDGGD
ADWFIVPARTSGGVADRDGISLFLVPADAPGLKVERFRAIDGHRHARLTLEGTTAQAFGPLGEALPLIEAAVARANCALL
AEAVGSMEAVSAITLEYLRTREQFGRPIGTFQVLQHRMVDMRIACEEARAMLCHVAMAIPKGEAAFQRAVSAAKVRIGEC
GVYVGQQAVQLHGGVGFSDELIVSHHLKRQMMLAIAHGSVDHYRTRFAA
>Mature_369_residues
MRFTYSDEQAMLLDSVDRFGAEQFPPADRHHLVQQGRSAETAKWAMMAELGWLLLPIPEECGGLGGGVVELMALGEGFGR
HLVPGAYVASSVLASALLAHGGEAMHGLIGQLGAGEAIAAAALLEDDGSYDLHHVAATAQGAGGDWTLTGAKCHVEDGGD
ADWFIVPARTSGGVADRDGISLFLVPADAPGLKVERFRAIDGHRHARLTLEGTTAQAFGPLGEALPLIEAAVARANCALL
AEAVGSMEAVSAITLEYLRTREQFGRPIGTFQVLQHRMVDMRIACEEARAMLCHVAMAIPKGEAAFQRAVSAAKVRIGEC
GVYVGQQAVQLHGGVGFSDELIVSHHLKRQMMLAIAHGSVDHYRTRFAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=368, Percent_Identity=27.1739130434783, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI226958412, Length=377, Percent_Identity=26.790450928382, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI226958414, Length=335, Percent_Identity=27.1641791044776, Blast_Score=99, Evalue=6e-21,
Organism=Homo sapiens, GI4501857, Length=350, Percent_Identity=25.7142857142857, Blast_Score=96, Evalue=4e-20,
Organism=Homo sapiens, GI76496475, Length=373, Percent_Identity=25.4691689008043, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI4557235, Length=373, Percent_Identity=25.4691689008043, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI4501859, Length=367, Percent_Identity=21.7983651226158, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI7656849, Length=326, Percent_Identity=23.6196319018405, Blast_Score=78, Evalue=1e-14,
Organism=Homo sapiens, GI4557231, Length=368, Percent_Identity=22.2826086956522, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI187960098, Length=368, Percent_Identity=22.2826086956522, Blast_Score=76, Evalue=5e-14,
Organism=Homo sapiens, GI21361497, Length=380, Percent_Identity=25, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI87081958, Length=367, Percent_Identity=22.8882833787466, Blast_Score=80, Evalue=3e-16,
Organism=Escherichia coli, GI1786223, Length=378, Percent_Identity=23.5449735449735, Blast_Score=73, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17538396, Length=373, Percent_Identity=24.3967828418231, Blast_Score=97, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17570075, Length=370, Percent_Identity=24.5945945945946, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17508101, Length=368, Percent_Identity=24.4565217391304, Blast_Score=86, Evalue=4e-17,
Organism=Caenorhabditis elegans, GI71985184, Length=337, Percent_Identity=25.8160237388724, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17506239, Length=373, Percent_Identity=22.5201072386059, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17534899, Length=374, Percent_Identity=24.0641711229947, Blast_Score=76, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17505929, Length=367, Percent_Identity=24.5231607629428, Blast_Score=74, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17551932, Length=367, Percent_Identity=23.433242506812, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17569725, Length=382, Percent_Identity=24.0837696335079, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI21356377, Length=373, Percent_Identity=24.9329758713137, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI21355753, Length=333, Percent_Identity=26.4264264264264, Blast_Score=96, Evalue=5e-20,
Organism=Drosophila melanogaster, GI24646207, Length=376, Percent_Identity=23.6702127659574, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24660351, Length=371, Percent_Identity=25.3369272237197, Blast_Score=86, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24666513, Length=366, Percent_Identity=22.6775956284153, Blast_Score=75, Evalue=6e-14,
Organism=Drosophila melanogaster, GI281363737, Length=372, Percent_Identity=21.505376344086, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 39059; Mature: 39059

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFTYSDEQAMLLDSVDRFGAEQFPPADRHHLVQQGRSAETAKWAMMAELGWLLLPIPEE
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCEEEEECCHH
CGGLGGGVVELMALGEGFGRHLVPGAYVASSVLASALLAHGGEAMHGLIGQLGAGEAIAA
HCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
AALLEDDGSYDLHHVAATAQGAGGDWTLTGAKCHVEDGGDADWFIVPARTSGGVADRDGI
HHHHCCCCCCCHHHHEEECCCCCCCEEEECCEEEECCCCCCCEEEEECCCCCCCCCCCCC
SLFLVPADAPGLKVERFRAIDGHRHARLTLEGTTAQAFGPLGEALPLIEAAVARANCALL
EEEEEECCCCCCCHHHEEECCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHH
AEAVGSMEAVSAITLEYLRTREQFGRPIGTFQVLQHRMVDMRIACEEARAMLCHVAMAIP
HHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KGEAAFQRAVSAAKVRIGECGVYVGQQAVQLHGGVGFSDELIVSHHLKRQMMLAIAHGSV
CCHHHHHHHHHHHHEEECCCCHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCCH
DHYRTRFAA
HHHHHHCCC
>Mature Secondary Structure
MRFTYSDEQAMLLDSVDRFGAEQFPPADRHHLVQQGRSAETAKWAMMAELGWLLLPIPEE
CCCCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHCCEEEEECCHH
CGGLGGGVVELMALGEGFGRHLVPGAYVASSVLASALLAHGGEAMHGLIGQLGAGEAIAA
HCCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHHH
AALLEDDGSYDLHHVAATAQGAGGDWTLTGAKCHVEDGGDADWFIVPARTSGGVADRDGI
HHHHCCCCCCCHHHHEEECCCCCCCEEEECCEEEECCCCCCCEEEEECCCCCCCCCCCCC
SLFLVPADAPGLKVERFRAIDGHRHARLTLEGTTAQAFGPLGEALPLIEAAVARANCALL
EEEEEECCCCCCCHHHEEECCCCCEEEEEEECCCHHHHCCHHHHHHHHHHHHHHHHHHHH
AEAVGSMEAVSAITLEYLRTREQFGRPIGTFQVLQHRMVDMRIACEEARAMLCHVAMAIP
HHHHCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KGEAAFQRAVSAAKVRIGECGVYVGQQAVQLHGGVGFSDELIVSHHLKRQMMLAIAHGSV
CCHHHHHHHHHHHHEEECCCCHHHCCHHHEEECCCCCCCHHHHHHHHHHHHHHHHHCCCH
DHYRTRFAA
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]