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The map label for this gene is fadE25 [H]

Identifier: 87199585

GI number: 87199585

Start: 1625751

End: 1626938

Strand: Direct

Name: fadE25 [H]

Synonym: Saro_1568

Alternate gene names: 87199585

Gene position: 1625751-1626938 (Clockwise)

Preceding gene: 87199584

Following gene: 87199586

Centisome position: 45.65

GC content: 64.81

Gene sequence:

>1188_bases
ATGGACTTTGAACTCGATCCCGCCGATGTCGCCTTTCGCGAGGAAGTGCGCGAATTCTTCACCACCGGCATCCCCCAGGA
GTGGCGCACCCGCGTCCGTGCAGGATTGCGCCTCCATCCCGAAGAGCTGATCGCATACCAGAAGCGCCTCGCCGCAAAGG
GCTGGGGCGCGCCCACGTGGCCTGCCCAGTACGGTGGCACCGGCTGGAGCCCGATCCGTCAGTACATCTTCTGGACCGAG
GCTGCCGAGGCCGATGCCCCCGCCCAGTTCCACCAAGGGCTCGAGCTGATCGGCCCGATCATCTTCACGTACGGCAGCGC
CGCCCAGAAGGCGCGCTTTCTGCCGGGCATCGTCAATGCCGACGACTGGTGGTGCCAGGGCTATTCCGAACCCAACGCCG
GATCGGATCTTGCATCGCTCCGCACCCGCGCGGTGCGCGATGGCGACCACTACGTGCTCAACGGGCAGAAGGCGTGGACC
AGCTACGGGCACGTCGCCAGCCACTGCTTCGTGCTGGCCCGGACTTCTGACGAGGCCAAGCGGCAGCAGGGCATCTCGCT
GTTCCTGCTCGACATGAAGACGCCGGGCATCACCATCCGCCCGGTCGCGACTATGGACGAGAAGCACCACACCAACGAGA
TGTTCCTCGATGACGTTCGCGTACCGGTCGAAAACCTGGTTGGGGAAGAAGGGCGCGGCTGGGAATACGGCAAGGTCCTG
CTCGACCGCGAACGCATGGTCACTGCATCGGTGGCGGTCTTCCTGATCCAGACGGTCAAGGCGATCCGAGATGCGGCCTC
TCGGCACACGATCGGGGGCGTGTCGCTGCTCGACAAGCCGGACTTCAAGGACAAGCTGGCGCAGTACGAGATCGAGGTGA
TCGCGCTCCAGACGATGGTCCTTCGCGTAATGGCGGATGCCAGCGCAGGGGTTGATTCGGGACCGCTCGGGTCGATGATC
AAGCTTCGCTGGTCGCAGCTCCTGCAGGCCGGCACCGCTCTGTGGATCGCCGCTCTCGGGCCAAAGGCCGCCCACTTTGC
CGCGCTCGACCACGCTTCGGTCCTGCCCACCGACATGCCCTATGCCATGCAGGGCGTGCTCCATTCCCGCGTGACCTCGA
TCTATGGCGGATCGAGCGAGATCCAGCACAACATCATCGCCCAGCGTGCGCTGGGCCTGAAGGGATAA

Upstream 100 bases:

>100_bases
GATCATCCCGATGGCGGGCGCATCGCCGTCGTTCGAGGACTTGGCGTGCGCGGCATTGCCGAAAGCCTCTTCACCGCCCG
ATCCAACGCAGGCTAGCCCA

Downstream 100 bases:

>100_bases
GCTTCGCGATGCGCTTCACCTATTCAGACGAGCAGGCAATGCTGCTCGACAGCGTCGACCGCTTCGGCGCCGAGCAGTTC
CCTCCCGCGGATCGTCACCA

Product: acyl-CoA dehydrogenase-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MDFELDPADVAFREEVREFFTTGIPQEWRTRVRAGLRLHPEELIAYQKRLAAKGWGAPTWPAQYGGTGWSPIRQYIFWTE
AAEADAPAQFHQGLELIGPIIFTYGSAAQKARFLPGIVNADDWWCQGYSEPNAGSDLASLRTRAVRDGDHYVLNGQKAWT
SYGHVASHCFVLARTSDEAKRQQGISLFLLDMKTPGITIRPVATMDEKHHTNEMFLDDVRVPVENLVGEEGRGWEYGKVL
LDRERMVTASVAVFLIQTVKAIRDAASRHTIGGVSLLDKPDFKDKLAQYEIEVIALQTMVLRVMADASAGVDSGPLGSMI
KLRWSQLLQAGTALWIAALGPKAAHFAALDHASVLPTDMPYAMQGVLHSRVTSIYGGSSEIQHNIIAQRALGLKG

Sequences:

>Translated_395_residues
MDFELDPADVAFREEVREFFTTGIPQEWRTRVRAGLRLHPEELIAYQKRLAAKGWGAPTWPAQYGGTGWSPIRQYIFWTE
AAEADAPAQFHQGLELIGPIIFTYGSAAQKARFLPGIVNADDWWCQGYSEPNAGSDLASLRTRAVRDGDHYVLNGQKAWT
SYGHVASHCFVLARTSDEAKRQQGISLFLLDMKTPGITIRPVATMDEKHHTNEMFLDDVRVPVENLVGEEGRGWEYGKVL
LDRERMVTASVAVFLIQTVKAIRDAASRHTIGGVSLLDKPDFKDKLAQYEIEVIALQTMVLRVMADASAGVDSGPLGSMI
KLRWSQLLQAGTALWIAALGPKAAHFAALDHASVLPTDMPYAMQGVLHSRVTSIYGGSSEIQHNIIAQRALGLKG
>Mature_395_residues
MDFELDPADVAFREEVREFFTTGIPQEWRTRVRAGLRLHPEELIAYQKRLAAKGWGAPTWPAQYGGTGWSPIRQYIFWTE
AAEADAPAQFHQGLELIGPIIFTYGSAAQKARFLPGIVNADDWWCQGYSEPNAGSDLASLRTRAVRDGDHYVLNGQKAWT
SYGHVASHCFVLARTSDEAKRQQGISLFLLDMKTPGITIRPVATMDEKHHTNEMFLDDVRVPVENLVGEEGRGWEYGKVL
LDRERMVTASVAVFLIQTVKAIRDAASRHTIGGVSLLDKPDFKDKLAQYEIEVIALQTMVLRVMADASAGVDSGPLGSMI
KLRWSQLLQAGTALWIAALGPKAAHFAALDHASVLPTDMPYAMQGVLHSRVTSIYGGSSEIQHNIIAQRALGLKG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=355, Percent_Identity=29.0140845070423, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI226958414, Length=273, Percent_Identity=28.9377289377289, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4501857, Length=402, Percent_Identity=27.363184079602, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI226958412, Length=270, Percent_Identity=28.8888888888889, Blast_Score=107, Evalue=2e-23,
Organism=Homo sapiens, GI4501859, Length=336, Percent_Identity=27.9761904761905, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI187960098, Length=312, Percent_Identity=26.6025641025641, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI4557231, Length=312, Percent_Identity=26.6025641025641, Blast_Score=96, Evalue=6e-20,
Organism=Homo sapiens, GI21361497, Length=264, Percent_Identity=28.7878787878788, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI76496475, Length=229, Percent_Identity=31.8777292576419, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI4557235, Length=229, Percent_Identity=31.8777292576419, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI7656849, Length=394, Percent_Identity=25.3807106598985, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI38505218, Length=202, Percent_Identity=31.6831683168317, Blast_Score=77, Evalue=3e-14,
Organism=Homo sapiens, GI211971008, Length=211, Percent_Identity=28.436018957346, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI48976061, Length=211, Percent_Identity=28.436018957346, Blast_Score=75, Evalue=9e-14,
Organism=Escherichia coli, GI87081958, Length=309, Percent_Identity=27.1844660194175, Blast_Score=95, Evalue=6e-21,
Organism=Escherichia coli, GI1786223, Length=330, Percent_Identity=23.3333333333333, Blast_Score=72, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI17551932, Length=286, Percent_Identity=29.7202797202797, Blast_Score=109, Evalue=2e-24,
Organism=Caenorhabditis elegans, GI17570075, Length=410, Percent_Identity=28.5365853658537, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17538396, Length=316, Percent_Identity=28.4810126582279, Blast_Score=108, Evalue=4e-24,
Organism=Caenorhabditis elegans, GI17508101, Length=338, Percent_Identity=27.5147928994083, Blast_Score=107, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI17506239, Length=406, Percent_Identity=26.8472906403941, Blast_Score=106, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17534899, Length=343, Percent_Identity=29.1545189504373, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17505929, Length=304, Percent_Identity=28.6184210526316, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI32563615, Length=205, Percent_Identity=30.7317073170732, Blast_Score=93, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI71985192, Length=233, Percent_Identity=28.3261802575107, Blast_Score=92, Evalue=4e-19,
Organism=Caenorhabditis elegans, GI71985184, Length=233, Percent_Identity=28.3261802575107, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI17569725, Length=352, Percent_Identity=26.7045454545455, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=251, Percent_Identity=27.8884462151394, Blast_Score=85, Evalue=8e-17,
Organism=Caenorhabditis elegans, GI71982178, Length=260, Percent_Identity=27.3076923076923, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17533517, Length=206, Percent_Identity=27.6699029126214, Blast_Score=82, Evalue=5e-16,
Organism=Caenorhabditis elegans, GI17534353, Length=248, Percent_Identity=27.0161290322581, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI281363737, Length=229, Percent_Identity=29.6943231441048, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI24666513, Length=343, Percent_Identity=27.6967930029155, Blast_Score=103, Evalue=2e-22,
Organism=Drosophila melanogaster, GI21356377, Length=377, Percent_Identity=27.8514588859416, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI24646207, Length=384, Percent_Identity=27.6041666666667, Blast_Score=99, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21355753, Length=217, Percent_Identity=31.7972350230415, Blast_Score=99, Evalue=7e-21,
Organism=Drosophila melanogaster, GI24660351, Length=315, Percent_Identity=27.3015873015873, Blast_Score=96, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 43641; Mature: 43641

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFELDPADVAFREEVREFFTTGIPQEWRTRVRAGLRLHPEELIAYQKRLAAKGWGAPTW
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
PAQYGGTGWSPIRQYIFWTEAAEADAPAQFHQGLELIGPIIFTYGSAAQKARFLPGIVNA
CHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCHHHHHHCCCCCCCC
DDWWCQGYSEPNAGSDLASLRTRAVRDGDHYVLNGQKAWTSYGHVASHCFVLARTSDEAK
CCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHEEEEEECCHHHH
RQQGISLFLLDMKTPGITIRPVATMDEKHHTNEMFLDDVRVPVENLVGEEGRGWEYGKVL
HHCCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCHHHHH
LDRERMVTASVAVFLIQTVKAIRDAASRHTIGGVSLLDKPDFKDKLAQYEIEVIALQTMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH
LRVMADASAGVDSGPLGSMIKLRWSQLLQAGTALWIAALGPKAAHFAALDHASVLPTDMP
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHEEEEECCCCHHHHHHHCCCCCCCCCCC
YAMQGVLHSRVTSIYGGSSEIQHNIIAQRALGLKG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MDFELDPADVAFREEVREFFTTGIPQEWRTRVRAGLRLHPEELIAYQKRLAAKGWGAPTW
CCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
PAQYGGTGWSPIRQYIFWTEAAEADAPAQFHQGLELIGPIIFTYGSAAQKARFLPGIVNA
CHHCCCCCHHHHHHHHHHHCCCCCCCCHHHHCCHHHHHHHHHHCCCHHHHHHCCCCCCCC
DDWWCQGYSEPNAGSDLASLRTRAVRDGDHYVLNGQKAWTSYGHVASHCFVLARTSDEAK
CCHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHEEEEEECCHHHH
RQQGISLFLLDMKTPGITIRPVATMDEKHHTNEMFLDDVRVPVENLVGEEGRGWEYGKVL
HHCCCEEEEEEECCCCEEEEEECCCCCCCCCCHHHHHHHCCCHHHHCCCCCCCCCHHHHH
LDRERMVTASVAVFLIQTVKAIRDAASRHTIGGVSLLDKPDFKDKLAQYEIEVIALQTMV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHHHHHHHHHH
LRVMADASAGVDSGPLGSMIKLRWSQLLQAGTALWIAALGPKAAHFAALDHASVLPTDMP
HHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCHHEEEEECCCCHHHHHHHCCCCCCCCCCC
YAMQGVLHSRVTSIYGGSSEIQHNIIAQRALGLKG
HHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]