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The map label for this gene is yvrE [H]

Identifier: 87199584

GI number: 87199584

Start: 1624862

End: 1625746

Strand: Direct

Name: yvrE [H]

Synonym: Saro_1567

Alternate gene names: 87199584

Gene position: 1624862-1625746 (Clockwise)

Preceding gene: 87199583

Following gene: 87199585

Centisome position: 45.62

GC content: 64.07

Gene sequence:

>885_bases
ATGGTCGAGATCGACTTCCTGGGTGACCACCGTTGCCTGCTGGGCGAAAGCCCGGTGTGGGATGCACGGGGGCGAAGGCT
GTGGTGGGTGGATGCCGTTGGAAACTCGATCCACGCGGCCACGCCAGAAGGCGTGCCTCTGGTATCGTGGCGTTACGAAG
CGATGGTCGGCAGCATTGGTCTTGCGGAAACCGGCTTGGTCGCTGCGTTCTCCGATCATTTCGCGCTGATCGACGGGGCT
ACCGGTCGGGCAACGCCATTTGCTGCGGTTCCCGGAAACGATGGCGCCATGCGCCTCAATGATGGCAAGGTGGATCGCGG
CGGAAACCACTACATTTGCGGGGAGACCCGCATGGCCGAAGGGGCGACCGGGACGCTGTTCCAGCTTGCGGCAAACGGTG
CGCTTGCCCCGGTGGCCCGCGGGATGCGCATCTCCAATGCCACCTGCTTTTCGCCCGAGGGGTCACGGCTTTACTTTGCC
GACAGCCTCGACGGCGCGATCCGCTGCCATGCCTACGATCCTGCTACGGGCACCGTCGGTGCCCGCGTCGGCACGATCGA
TCTCAAGTCCATCGGTCAGGCTCCTGATGGCGCCACGATCGATGCGGAGGGCAATCTCTGGATTGCACTTGTACTCGATC
AGGCCGTCGCCTGCGTCAGTCCTGCGGGCGAACTGATCCGTCGGATCGACATGCCGATGCCCTATCCCTCGTGCCCGGCA
TTCGGAGGGCCGCAGCTCGATACCCTGTACGTTACCTCCATCGCCAATTCCGGCCACAACCTCGTCACCGATCATCCCGA
TGGCGGGCGCATCGCCGTCGTTCGAGGACTTGGCGTGCGCGGCATTGCCGAAAGCCTCTTCACCGCCCGATCCAACGCAG
GCTAG

Upstream 100 bases:

>100_bases
GTGCGCATGCGCCGATCAGGTGCATGCAGCCCCCGCTCGCGAATAGTCTGCATCCCTGACCGGAGCCGTACCGCGCTCCG
GCATGGGAGAGCGATGGGTG

Downstream 100 bases:

>100_bases
CCCAATGGACTTTGAACTCGATCCCGCCGATGTCGCCTTTCGCGAGGAAGTGCGCGAATTCTTCACCACCGGCATCCCCC
AGGAGTGGCGCACCCGCGTC

Product: senescence marker protein-30 (SMP-30)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MVEIDFLGDHRCLLGESPVWDARGRRLWWVDAVGNSIHAATPEGVPLVSWRYEAMVGSIGLAETGLVAAFSDHFALIDGA
TGRATPFAAVPGNDGAMRLNDGKVDRGGNHYICGETRMAEGATGTLFQLAANGALAPVARGMRISNATCFSPEGSRLYFA
DSLDGAIRCHAYDPATGTVGARVGTIDLKSIGQAPDGATIDAEGNLWIALVLDQAVACVSPAGELIRRIDMPMPYPSCPA
FGGPQLDTLYVTSIANSGHNLVTDHPDGGRIAVVRGLGVRGIAESLFTARSNAG

Sequences:

>Translated_294_residues
MVEIDFLGDHRCLLGESPVWDARGRRLWWVDAVGNSIHAATPEGVPLVSWRYEAMVGSIGLAETGLVAAFSDHFALIDGA
TGRATPFAAVPGNDGAMRLNDGKVDRGGNHYICGETRMAEGATGTLFQLAANGALAPVARGMRISNATCFSPEGSRLYFA
DSLDGAIRCHAYDPATGTVGARVGTIDLKSIGQAPDGATIDAEGNLWIALVLDQAVACVSPAGELIRRIDMPMPYPSCPA
FGGPQLDTLYVTSIANSGHNLVTDHPDGGRIAVVRGLGVRGIAESLFTARSNAG
>Mature_294_residues
MVEIDFLGDHRCLLGESPVWDARGRRLWWVDAVGNSIHAATPEGVPLVSWRYEAMVGSIGLAETGLVAAFSDHFALIDGA
TGRATPFAAVPGNDGAMRLNDGKVDRGGNHYICGETRMAEGATGTLFQLAANGALAPVARGMRISNATCFSPEGSRLYFA
DSLDGAIRCHAYDPATGTVGARVGTIDLKSIGQAPDGATIDAEGNLWIALVLDQAVACVSPAGELIRRIDMPMPYPSCPA
FGGPQLDTLYVTSIANSGHNLVTDHPDGGRIAVVRGLGVRGIAESLFTARSNAG

Specific function: Unknown

COG id: COG3386

COG function: function code G; Gluconolactonase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SMP-30/CGR1 family [H]

Homologues:

Organism=Homo sapiens, GI23111021, Length=291, Percent_Identity=29.2096219931272, Blast_Score=111, Evalue=8e-25,
Organism=Homo sapiens, GI4759036, Length=291, Percent_Identity=29.2096219931272, Blast_Score=111, Evalue=8e-25,
Organism=Drosophila melanogaster, GI24641471, Length=275, Percent_Identity=28.3636363636364, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI18860103, Length=275, Percent_Identity=28.3636363636364, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24641469, Length=275, Percent_Identity=28.3636363636364, Blast_Score=87, Evalue=2e-17,
Organism=Drosophila melanogaster, GI45551448, Length=275, Percent_Identity=28.3636363636364, Blast_Score=86, Evalue=2e-17,
Organism=Drosophila melanogaster, GI24646912, Length=307, Percent_Identity=27.3615635179153, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24646910, Length=307, Percent_Identity=27.3615635179153, Blast_Score=86, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011042
- InterPro:   IPR013658
- InterPro:   IPR005511 [H]

Pfam domain/function: PF08450 SGL [H]

EC number: NA

Molecular weight: Translated: 30690; Mature: 30690

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVEIDFLGDHRCLLGESPVWDARGRRLWWVDAVGNSIHAATPEGVPLVSWRYEAMVGSIG
CEEEEEECCCEEECCCCCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEEHHHHHCCCC
LAETGLVAAFSDHFALIDGATGRATPFAAVPGNDGAMRLNDGKVDRGGNHYICGETRMAE
CCCCCEEEEECCCEEEEECCCCCCCCEEEECCCCCEEEECCCCCCCCCCEEEECCCEECC
GATGTLFQLAANGALAPVARGMRISNATCFSPEGSRLYFADSLDGAIRCHAYDPATGTVG
CCCCEEEEEECCCCHHHHHCCEEECCCEEECCCCCEEEEEECCCCEEEEEEECCCCCCCC
ARVGTIDLKSIGQAPDGATIDAEGNLWIALVLDQAVACVSPAGELIRRIDMPMPYPSCPA
CEEEEEEHHHCCCCCCCCEEECCCCEEEEEEEHHHHHHHCCHHHHHHHHCCCCCCCCCCC
FGGPQLDTLYVTSIANSGHNLVTDHPDGGRIAVVRGLGVRGIAESLFTARSNAG
CCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCC
>Mature Secondary Structure
MVEIDFLGDHRCLLGESPVWDARGRRLWWVDAVGNSIHAATPEGVPLVSWRYEAMVGSIG
CEEEEEECCCEEECCCCCCCCCCCCEEEEEECCCCEEECCCCCCCEEEEEEHHHHHCCCC
LAETGLVAAFSDHFALIDGATGRATPFAAVPGNDGAMRLNDGKVDRGGNHYICGETRMAE
CCCCCEEEEECCCEEEEECCCCCCCCEEEECCCCCEEEECCCCCCCCCCEEEECCCEECC
GATGTLFQLAANGALAPVARGMRISNATCFSPEGSRLYFADSLDGAIRCHAYDPATGTVG
CCCCEEEEEECCCCHHHHHCCEEECCCEEECCCCCEEEEEECCCCEEEEEEECCCCCCCC
ARVGTIDLKSIGQAPDGATIDAEGNLWIALVLDQAVACVSPAGELIRRIDMPMPYPSCPA
CEEEEEEHHHCCCCCCCCEEECCCCEEEEEEEHHHHHHHCCHHHHHHHHCCCCCCCCCCC
FGGPQLDTLYVTSIANSGHNLVTDHPDGGRIAVVRGLGVRGIAESLFTARSNAG
CCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEEECCCCHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9639930; 9384377 [H]