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The map label for this gene is yagI [C]

Identifier: 87199583

GI number: 87199583

Start: 1623987

End: 1624754

Strand: Direct

Name: yagI [C]

Synonym: Saro_1566

Alternate gene names: 87199583

Gene position: 1623987-1624754 (Clockwise)

Preceding gene: 87199582

Following gene: 87199584

Centisome position: 45.6

GC content: 62.11

Gene sequence:

>768_bases
ATGTCGCAACCCGCGGTCAAGTCCGCGCTCCGTACGTTCGAAGTCCTCGAACTCTTCGCTGAGCGTCGCGCCCCGCTGCG
CCTGCAGGACATCCACTCGGCGCTCGGCTATCCGCAATCCAGCACCACTGCGCTGCTCAAGAGCATGGTGATGTGCGGCT
ATCTCAACTACGATCGCGACCATCGCACTTACCTGCCGACCACGCGCGTCAGCATGCTCGGCAACTGGTTGCCCGGCTAC
ATCCAGGCCGCAGGCGGCTACCGCGAATTGGTCGAGGAACTGCAGCGCCGGACCGATGAAACGGTTGCGCTCATCACCCG
CAACGATCTGTTCGTGCAGTACATCATCCTGCTAACTCCAGATCACGAACACCAGATGGCCCCCCAGGTCGGAGCCATGC
GCAAGCTTGTCGATTCTTCAGCCGGGCTTTCGCTCATGGCGCGAATGGACGACCGTGCGATCGACAAGCTGGTGCGTTAC
TCCAACGCCTACAACAGCGGCGATGATCTCCGCGTATCCTATGCGCAGATCATGCAGCAGGTCGATTGGGTGCGGAACGT
GGGCTATGCCTATGTGCCCAACCGGCCGACGCCCGCCGTGTCCTCGATCACCATGGCGCTCGATGCTGATCTCTATGGCG
TTCCATTGGCGCTTGGCGTCGGCGGGCTGGCTGGTCGGATCGCGGATCGCAAGGACCAGATCGTCGAGACGCTTCGCGAA
CTCGTCACGACCTTCCGGCCTGCTCCCGGCGGAATATCGCGGACATGA

Upstream 100 bases:

>100_bases
GCGCATGAGCCGTGCCCGCCCCCGCGCTGCGCCTTTACGGGAGCCATGATCGCAGGCATGAAACCTGCCGCAGGCCAGCA
TCAATCGCCGAGGGAGAACC

Downstream 100 bases:

>100_bases
TTGTCTCGTGCGCATGCGCCGATCAGGTGCATGCAGCCCCCGCTCGCGAATAGTCTGCATCCCTGACCGGAGCCGTACCG
CGCTCCGGCATGGGAGAGCG

Product: IclR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator; Regulatory Protein IclR; Regulatory Proteins IclR; IclR Helix-Turn-Helix Domain-Containing; Transcriptional Regulator IclR; Transcription Regulator

Number of amino acids: Translated: 255; Mature: 254

Protein sequence:

>255_residues
MSQPAVKSALRTFEVLELFAERRAPLRLQDIHSALGYPQSSTTALLKSMVMCGYLNYDRDHRTYLPTTRVSMLGNWLPGY
IQAAGGYRELVEELQRRTDETVALITRNDLFVQYIILLTPDHEHQMAPQVGAMRKLVDSSAGLSLMARMDDRAIDKLVRY
SNAYNSGDDLRVSYAQIMQQVDWVRNVGYAYVPNRPTPAVSSITMALDADLYGVPLALGVGGLAGRIADRKDQIVETLRE
LVTTFRPAPGGISRT

Sequences:

>Translated_255_residues
MSQPAVKSALRTFEVLELFAERRAPLRLQDIHSALGYPQSSTTALLKSMVMCGYLNYDRDHRTYLPTTRVSMLGNWLPGY
IQAAGGYRELVEELQRRTDETVALITRNDLFVQYIILLTPDHEHQMAPQVGAMRKLVDSSAGLSLMARMDDRAIDKLVRY
SNAYNSGDDLRVSYAQIMQQVDWVRNVGYAYVPNRPTPAVSSITMALDADLYGVPLALGVGGLAGRIADRKDQIVETLRE
LVTTFRPAPGGISRT
>Mature_254_residues
SQPAVKSALRTFEVLELFAERRAPLRLQDIHSALGYPQSSTTALLKSMVMCGYLNYDRDHRTYLPTTRVSMLGNWLPGYI
QAAGGYRELVEELQRRTDETVALITRNDLFVQYIILLTPDHEHQMAPQVGAMRKLVDSSAGLSLMARMDDRAIDKLVRYS
NAYNSGDDLRVSYAQIMQQVDWVRNVGYAYVPNRPTPAVSSITMALDADLYGVPLALGVGGLAGRIADRKDQIVETLREL
VTTFRPAPGGISRT

Specific function: Unknown

COG id: COG1414

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28453; Mature: 28322

Theoretical pI: Translated: 8.37; Mature: 8.37

Prosite motif: PS51077 HTH_ICLR ; PS51078 ICLR_ED

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQPAVKSALRTFEVLELFAERRAPLRLQDIHSALGYPQSSTTALLKSMVMCGYLNYDRD
CCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
HRTYLPTTRVSMLGNWLPGYIQAAGGYRELVEELQRRTDETVALITRNDLFVQYIILLTP
CCEECCHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHEEEEEEEECC
DHEHQMAPQVGAMRKLVDSSAGLSLMARMDDRAIDKLVRYSNAYNSGDDLRVSYAQIMQQ
CCHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VDWVRNVGYAYVPNRPTPAVSSITMALDADLYGVPLALGVGGLAGRIADRKDQIVETLRE
HHHHHHCCEEECCCCCCCHHHHHHHHHCCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH
LVTTFRPAPGGISRT
HHHHCCCCCCCCCCC
>Mature Secondary Structure 
SQPAVKSALRTFEVLELFAERRAPLRLQDIHSALGYPQSSTTALLKSMVMCGYLNYDRD
CCHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCC
HRTYLPTTRVSMLGNWLPGYIQAAGGYRELVEELQRRTDETVALITRNDLFVQYIILLTP
CCEECCHHHHHHHHCCCHHHHHHCCCHHHHHHHHHHCCCCEEEEEECCHHEEEEEEEECC
DHEHQMAPQVGAMRKLVDSSAGLSLMARMDDRAIDKLVRYSNAYNSGDDLRVSYAQIMQQ
CCHHHHCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
VDWVRNVGYAYVPNRPTPAVSSITMALDADLYGVPLALGVGGLAGRIADRKDQIVETLRE
HHHHHHCCEEECCCCCCCHHHHHHHHHCCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHHH
LVTTFRPAPGGISRT
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA