| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is tauD [C]
Identifier: 87199563
GI number: 87199563
Start: 1599944
End: 1600894
Strand: Direct
Name: tauD [C]
Synonym: Saro_1546
Alternate gene names: 87199563
Gene position: 1599944-1600894 (Clockwise)
Preceding gene: 87199562
Following gene: 87199565
Centisome position: 44.92
GC content: 62.78
Gene sequence:
>951_bases ATGACTGCCATCACCACTTATGCCAATGCCAAGGACCCCAACTCTCCTCTCGACATCGTTCCGGTCACAGGAACCATCGG TGCGGAAATCCGCGGCGTGACGCTGTCCGGCGATCTTGATGCCGGGACCGTCCAGGCGATCAAGGATGCCGTCGTGCGCC ACAAGGTCGTGTTCTTCCGCGGCCAGAAGGACCTTGACGATGCACGACATGAAGGCTTCGCCTCGTTGTTCGGAGAGCCG GTCGCACATCCAACCGTGCCGGTCGCGGAAGGTTCGCGCTATCTGCTCGAACTCGACAGCAAGGAAGGCTACGCGGCCTC GAGCTGGCACACCGACGTGACCTTCGTCGATTCCTATCCCAAGGGCTCGATCCTACGCGCGATCACTGTTCCTGAAGCGG GCGGGGATACCGTCTGGGCGAATGGTGAAACCGCCTACGAAAGCCTACCGGAATCCCTTCGCCAACTGGTGAACAACCTT TGGGCGGTCCACACCAACCTTTACGACTACGCCGCCGTCCTCAATGCACCCAAGGGCGACGAGACCGAGCGCGAGCGCGT GAACTTCCACAAGAGCGTGTTCGCATCGACCGTCTACGAGACCGAGCACCCCGTGGTCCGCGTCCACCCCGTCTCGGGCC AGCGCAGCCTGCTGCTGGGTCATTTCGTGAAGCAATTCGTCGGGCTCAACCAGGCGGACTCCTCGCGCCTGTTCCAGATC CTGCAGGATCACATCACCCGGCCCGAAAACGTCGTGCGCTGGCGCTGGCAGCCGGGTGATGTGGCGTTCTGGGACAACCA GTCGACCCAGCACCGTGCCGTCGCCGACTTTGGTCTGCAGCGTCGCACCCTGCGCCGCGCTACTATTGCAGGTGAAGTGC CGGTCGGCATCGACGGTCGCCAGAGCCGTACCGTGCGGAAGGAAAAGGCCACCGAATACCAGCCCGCCTGA
Upstream 100 bases:
>100_bases AGCAGCACGACGCCATTCGCCGCCACCTCGATACCGCAGCCGATCCTGCGCTCCAGCCGGCCGAATAACTCCCTGAAGCT CAACACGAAGGAGCAAATCC
Downstream 100 bases:
>100_bases TGGTTGGATGACCTGAGCAGGGCCTGCCCGAGGGCGGGCGGCGGGGTGGCAGACTCTCACTGCCACCCCGCAATTCCAAT GGTTTCGAAAGCCGGGGCTT
Product: taurine dioxygenase
Products: Aminoacetaldehyde; CO2; H+; Sulfite; Succinate [C]
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTAITTYANAKDPNSPLDIVPVTGTIGAEIRGVTLSGDLDAGTVQAIKDAVVRHKVVFFRGQKDLDDARHEGFASLFGEP VAHPTVPVAEGSRYLLELDSKEGYAASSWHTDVTFVDSYPKGSILRAITVPEAGGDTVWANGETAYESLPESLRQLVNNL WAVHTNLYDYAAVLNAPKGDETERERVNFHKSVFASTVYETEHPVVRVHPVSGQRSLLLGHFVKQFVGLNQADSSRLFQI LQDHITRPENVVRWRWQPGDVAFWDNQSTQHRAVADFGLQRRTLRRATIAGEVPVGIDGRQSRTVRKEKATEYQPA
Sequences:
>Translated_316_residues MTAITTYANAKDPNSPLDIVPVTGTIGAEIRGVTLSGDLDAGTVQAIKDAVVRHKVVFFRGQKDLDDARHEGFASLFGEP VAHPTVPVAEGSRYLLELDSKEGYAASSWHTDVTFVDSYPKGSILRAITVPEAGGDTVWANGETAYESLPESLRQLVNNL WAVHTNLYDYAAVLNAPKGDETERERVNFHKSVFASTVYETEHPVVRVHPVSGQRSLLLGHFVKQFVGLNQADSSRLFQI LQDHITRPENVVRWRWQPGDVAFWDNQSTQHRAVADFGLQRRTLRRATIAGEVPVGIDGRQSRTVRKEKATEYQPA >Mature_315_residues TAITTYANAKDPNSPLDIVPVTGTIGAEIRGVTLSGDLDAGTVQAIKDAVVRHKVVFFRGQKDLDDARHEGFASLFGEPV AHPTVPVAEGSRYLLELDSKEGYAASSWHTDVTFVDSYPKGSILRAITVPEAGGDTVWANGETAYESLPESLRQLVNNLW AVHTNLYDYAAVLNAPKGDETERERVNFHKSVFASTVYETEHPVVRVHPVSGQRSLLLGHFVKQFVGLNQADSSRLFQIL QDHITRPENVVRWRWQPGDVAFWDNQSTQHRAVADFGLQRRTLRRATIAGEVPVGIDGRQSRTVRKEKATEYQPA
Specific function: Catalyzes The Conversion Of Taurine And Alpha Ketoglutarate To Sulfite, Aminoacetaldehyde And Succinate. Required For The Utilization Of Taurine (2-Aminoethanesulfonic Acid) As An Alternative Sulfur Source. Pentane-Sulfonic Acid, 3- (N-Morpholino)Propanes
COG id: COG2175
COG function: function code Q; Probable taurine catabolism dioxygenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tfdA dioxygenase family [H]
Homologues:
Organism=Escherichia coli, GI1786565, Length=281, Percent_Identity=40.5693950177936, Blast_Score=196, Evalue=1e-51, Organism=Saccharomyces cerevisiae, GI6322971, Length=307, Percent_Identity=25.7328990228013, Blast_Score=90, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003819 [H]
Pfam domain/function: PF02668 TauD [H]
EC number: 1.14.11.17 [C]
Molecular weight: Translated: 35012; Mature: 34881
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAITTYANAKDPNSPLDIVPVTGTIGAEIRGVTLSGDLDAGTVQAIKDAVVRHKVVFFR CCEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHEEEEEE GQKDLDDARHEGFASLFGEPVAHPTVPVAEGSRYLLELDSKEGYAASSWHTDVTFVDSYP CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCEEEEECCC KGSILRAITVPEAGGDTVWANGETAYESLPESLRQLVNNLWAVHTNLYDYAAVLNAPKGD CCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ETERERVNFHKSVFASTVYETEHPVVRVHPVSGQRSLLLGHFVKQFVGLNQADSSRLFQI CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LQDHITRPENVVRWRWQPGDVAFWDNQSTQHRAVADFGLQRRTLRRATIAGEVPVGIDGR HHHHCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC QSRTVRKEKATEYQPA CCHHHHHHHCCCCCCC >Mature Secondary Structure TAITTYANAKDPNSPLDIVPVTGTIGAEIRGVTLSGDLDAGTVQAIKDAVVRHKVVFFR CEEEECCCCCCCCCCEEEEEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHEEEEEE GQKDLDDARHEGFASLFGEPVAHPTVPVAEGSRYLLELDSKEGYAASSWHTDVTFVDSYP CCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCEECCCCCCEEEEECCC KGSILRAITVPEAGGDTVWANGETAYESLPESLRQLVNNLWAVHTNLYDYAAVLNAPKGD CCCEEEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC ETERERVNFHKSVFASTVYETEHPVVRVHPVSGQRSLLLGHFVKQFVGLNQADSSRLFQI CHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCHHHHHHH LQDHITRPENVVRWRWQPGDVAFWDNQSTQHRAVADFGLQRRTLRRATIAGEVPVGIDGR HHHHCCCCCCEEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC QSRTVRKEKATEYQPA CCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: Ascorbate. [C]
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-Oxoglutarate; O2; Taurine [C]
Specific reaction: 2-Oxoglutarate + O2 + Taurine --> Aminoacetaldehyde + CO2 + H+ + Sulfite + Succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]