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The map label for this gene is 87199533

Identifier: 87199533

GI number: 87199533

Start: 1559822

End: 1560604

Strand: Direct

Name: 87199533

Synonym: Saro_1515

Alternate gene names: NA

Gene position: 1559822-1560604 (Clockwise)

Preceding gene: 87199525

Following gene: 87199534

Centisome position: 43.8

GC content: 62.2

Gene sequence:

>783_bases
GTGAAGCGGGCATCGCTTACTCGTATAGTCGTGGCCTCGCAGGCGATTGAATTCGGAAAGCCGTTGACGAATACGAACAC
CCGATTGGCTGACTGGCCAGCTGGGACAGTGCCGCCAGGGGCTTTCACCAATCTCGCTGATGCGCAAAGGAATCGCATCG
CCATGCAGGCCATCGCCGCTGGCGAACCGATCCTGGCATCCCGCGTGACCGGCACCGATGGTCGCGCAACGCTTGCCGCA
GCCCTGCCACCCGGCATGGTAGCAGTCTCACTTCCCATTTCAGATGTTACCGGCGTGTCAGGTTTCGTTCGCCCGGGCGA
TCTGGTCGACATTATCCTCACCCGCCAGATTCCGGGTGAGGGTGCAGGCCAGCAGGACAAGATGACGGACGTCATCCTGC
GTCAGGTGGCCGTGCTGGGTATCGACCAGGTGGCTGATAAGTCGAAGACCGAAGCCGTCGTGGGCAAGACCGCCACCGTG
CAGGTCGATACCCTCGGCGCACAGAAGCTGGCACTGGCCCGCGAACTGGGTACGCTGTCACTGGGCCTTCGTTCACTGGC
TTCGGTTGAAGACACCGGTCCCACGCGAACCGTTCTGGCCCGCGATCTTGCTGGTCGCCAACTCTTTATTGCTCGCCGCT
CTGCCCCAGTTCCCGCTCCGCAGCGCGCTGCCGCATCACCCGCACCTGCGGCTGTGGCGATGCCACCGCGCTATTACGGC
CCGACCATGACGGTTTATCGCAAGGGCAAGCCAACCGACTATGAGGTGCGCCATGTTTTCTAA

Upstream 100 bases:

>100_bases
AAGTGCCATTGCGCTTGCCGCTGCCGTGTTCGTTGGCGTTATCGCCGTAATCATCGCAAACGCGTTCTTCACAGGTACGC
AAAATGCGGGAACGACTGAA

Downstream 100 bases:

>100_bases
GAGCCGACGCTACCTTGCCATCGGCTCCGCGCTTGCCGCGGCACTGTGCGCAACCACCAATGCGACTCGTGCCCAGGGCA
TCACAGCGGAAAACCTTCAC

Product: Flp pilus assembly CpaB

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein CpaB; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; Flp Pilus Assembly Protein CpaB-Like Protein; Flp Pilus Assembly Protein RcpC/CpaB; CpaB Pilus Assembly Protein; Flp Pilus Assembly Protein; CtpC Protein; Pilus Assembly-Related Exported Protein; Fimbriae-Assembly Related Protein; Pilus Assembly Domain-Containing Protein; Flp Pilus Assembly Protein Cpab; CpaB2 Pilus Assembly Protein; CpaB Family Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; SAF Domain Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 260; Mature: 260

Protein sequence:

>260_residues
MKRASLTRIVVASQAIEFGKPLTNTNTRLADWPAGTVPPGAFTNLADAQRNRIAMQAIAAGEPILASRVTGTDGRATLAA
ALPPGMVAVSLPISDVTGVSGFVRPGDLVDIILTRQIPGEGAGQQDKMTDVILRQVAVLGIDQVADKSKTEAVVGKTATV
QVDTLGAQKLALARELGTLSLGLRSLASVEDTGPTRTVLARDLAGRQLFIARRSAPVPAPQRAAASPAPAAVAMPPRYYG
PTMTVYRKGKPTDYEVRHVF

Sequences:

>Translated_260_residues
MKRASLTRIVVASQAIEFGKPLTNTNTRLADWPAGTVPPGAFTNLADAQRNRIAMQAIAAGEPILASRVTGTDGRATLAA
ALPPGMVAVSLPISDVTGVSGFVRPGDLVDIILTRQIPGEGAGQQDKMTDVILRQVAVLGIDQVADKSKTEAVVGKTATV
QVDTLGAQKLALARELGTLSLGLRSLASVEDTGPTRTVLARDLAGRQLFIARRSAPVPAPQRAAASPAPAAVAMPPRYYG
PTMTVYRKGKPTDYEVRHVF
>Mature_260_residues
MKRASLTRIVVASQAIEFGKPLTNTNTRLADWPAGTVPPGAFTNLADAQRNRIAMQAIAAGEPILASRVTGTDGRATLAA
ALPPGMVAVSLPISDVTGVSGFVRPGDLVDIILTRQIPGEGAGQQDKMTDVILRQVAVLGIDQVADKSKTEAVVGKTATV
QVDTLGAQKLALARELGTLSLGLRSLASVEDTGPTRTVLARDLAGRQLFIARRSAPVPAPQRAAASPAPAAVAMPPRYYG
PTMTVYRKGKPTDYEVRHVF

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27239; Mature: 27239

Theoretical pI: Translated: 10.77; Mature: 10.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRASLTRIVVASQAIEFGKPLTNTNTRLADWPAGTVPPGAFTNLADAQRNRIAMQAIAA
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GEPILASRVTGTDGRATLAAALPPGMVAVSLPISDVTGVSGFVRPGDLVDIILTRQIPGE
CCCEEEEEECCCCCCEEEEEECCCCEEEEEECCHHCCCCCCCCCCCCEEEEEEEECCCCC
GAGQQDKMTDVILRQVAVLGIDQVADKSKTEAVVGKTATVQVDTLGAQKLALARELGTLS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH
LGLRSLASVEDTGPTRTVLARDLAGRQLFIARRSAPVPAPQRAAASPAPAAVAMPPRYYG
HHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCC
PTMTVYRKGKPTDYEVRHVF
CCEEEEECCCCCCEEEEECC
>Mature Secondary Structure
MKRASLTRIVVASQAIEFGKPLTNTNTRLADWPAGTVPPGAFTNLADAQRNRIAMQAIAA
CCCHHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHC
GEPILASRVTGTDGRATLAAALPPGMVAVSLPISDVTGVSGFVRPGDLVDIILTRQIPGE
CCCEEEEEECCCCCCEEEEEECCCCEEEEEECCHHCCCCCCCCCCCCEEEEEEEECCCCC
GAGQQDKMTDVILRQVAVLGIDQVADKSKTEAVVGKTATVQVDTLGAQKLALARELGTLS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEECCCHHHHHHHHHHHHHH
LGLRSLASVEDTGPTRTVLARDLAGRQLFIARRSAPVPAPQRAAASPAPAAVAMPPRYYG
HHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCEEECCCCCCC
PTMTVYRKGKPTDYEVRHVF
CCEEEEECCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA