| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is phoB [C]
Identifier: 87199417
GI number: 87199417
Start: 1440264
End: 1440617
Strand: Direct
Name: phoB [C]
Synonym: Saro_1396
Alternate gene names: 87199417
Gene position: 1440264-1440617 (Clockwise)
Preceding gene: 87199416
Following gene: 87199425
Centisome position: 40.44
GC content: 62.99
Gene sequence:
>354_bases ATGATCGAAGGAAAGCGCATTCTCGTCGTGGAGGACGAATTCATCGTCGCGGCAATGGTCTGCGATACGCTGGAGGATGC GGGTGCCGTGCCGCTGGGGCCGGTGGGGCGCGTGGTTGAAGGCCTGGACATGATCCGCCAGGGCGGGATCGATGCCGCCG TCCTCGACTGGAACCTCAACGGAGAGCCGGGGGCGCCTTTGGCCGAAGCGCTTGCCGCGTCGTCGATCCCCTTCGTCATC GCCACTGGTTATGGTTCGGTCGAAGAGCCGTTCTCGGGCAGGCCGATTCTCGGAAAGCCTTATATCTCGGGTAACCTGAT CGAGCGTCTGGCGAGCCTTTTCGCCGCAACCTGA
Upstream 100 bases:
>100_bases CAGAGGCGGTGCCGCGCCAGCTCGGCGGCAAGGTCGAAATGCATTACGAATGGGAAGGCTTGCACTGCCGCATCGCCTTC CCGCTGACGGGAACGGGGCA
Downstream 100 bases:
>100_bases CGTGAAAAGACCGGGATCGGCGGATGCCGTCCCGGTCTTCGCATGGCCAGCGGCCAGGGCGCCGGATCAGTCCTTCTTAG CTTCGGCAACCGACTCGTTG
Product: response regulator receiver domain-containing protein
Products: NA
Alternate protein names: Two-Component Response Regulator; Response Regulator Receiver Domain-Containing Protein; Response Regulator; Two-Component Response Regulator Protein
Number of amino acids: Translated: 117; Mature: 117
Protein sequence:
>117_residues MIEGKRILVVEDEFIVAAMVCDTLEDAGAVPLGPVGRVVEGLDMIRQGGIDAAVLDWNLNGEPGAPLAEALAASSIPFVI ATGYGSVEEPFSGRPILGKPYISGNLIERLASLFAAT
Sequences:
>Translated_117_residues MIEGKRILVVEDEFIVAAMVCDTLEDAGAVPLGPVGRVVEGLDMIRQGGIDAAVLDWNLNGEPGAPLAEALAASSIPFVI ATGYGSVEEPFSGRPILGKPYISGNLIERLASLFAAT >Mature_117_residues MIEGKRILVVEDEFIVAAMVCDTLEDAGAVPLGPVGRVVEGLDMIRQGGIDAAVLDWNLNGEPGAPLAEALAASSIPFVI ATGYGSVEEPFSGRPILGKPYISGNLIERLASLFAAT
Specific function: This Protein Is A Positive Regulator For The Phosphate Regulon. Transcription Of This Operon Is Positively Regulated By Phob And Phor When Phosphate Is Limited. [C]
COG id: COG0784
COG function: function code T; FOG: CheY-like receiver
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12153; Mature: 12153
Theoretical pI: Translated: 3.95; Mature: 3.95
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEGKRILVVEDEFIVAAMVCDTLEDAGAVPLGPVGRVVEGLDMIRQGGIDAAVLDWNLN CCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC GEPGAPLAEALAASSIPFVIATGYGSVEEPFSGRPILGKPYISGNLIERLASLFAAT CCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MIEGKRILVVEDEFIVAAMVCDTLEDAGAVPLGPVGRVVEGLDMIRQGGIDAAVLDWNLN CCCCCEEEEEECCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEECCC GEPGAPLAEALAASSIPFVIATGYGSVEEPFSGRPILGKPYISGNLIERLASLFAAT CCCCCHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA