| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199404
Identifier: 87199404
GI number: 87199404
Start: 1429345
End: 1429749
Strand: Direct
Name: 87199404
Synonym: Saro_1383
Alternate gene names: NA
Gene position: 1429345-1429749 (Clockwise)
Preceding gene: 87199402
Following gene: 87199405
Centisome position: 40.13
GC content: 68.15
Gene sequence:
>405_bases ATGCTGGTGGTCCTTCTTGTCATGGGGCTGCTCGCGACAGTCGCGGTGCTGACCATGCCCGGAGACGAACGCAAGCTGCG CAACGAGGCGGAACGCTTTGCCGCGCGCACGCTGGCTGCGCGGGACGAGGCGATCGTCGGCGCGCGTCCGGTTGCGCTCG TGGTCAGCGAGCGCGGTTACTATTTCGAGCGGCGAATGGAGGGCCAGTGGCAACCACTGCCCGGTCGCGGTTTCGACCTG ACAGGCTGGGACGAGGGCACCCGCGCCGATGCGGTTCGTCAGCGGCTGGTGTTCGATTCGCTGGGCCTGGCCAGCAGCGA GGCAGCGGTGCGGCTGGACCGGGGCGGGCAAGTGCTCGTCGTACATGTCCGCCGTGATGGCAAGGTGACTGTCGATGCCG GCTGA
Upstream 100 bases:
>100_bases ATTGGTCGTAAAACCGTCACGTTTCTGCCGCATGCGAGTGACCGTGCCCACCTGCGAGACCCCAACCCGACCGGCTGCAA ACGGCTTCTCGCTGGTCGAG
Downstream 100 bases:
>100_bases CAACAGGCCCCCGATCCGCGCTCCGATCCGCGCCCCGATCCGGGCCCCGATCCGCGCCCACGCCAACGGCTTCACCCTGC TCGAGCTTCTGGTCGCGCTC
Product: general secretion pathway protein H
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MLVVLLVMGLLATVAVLTMPGDERKLRNEAERFAARTLAARDEAIVGARPVALVVSERGYYFERRMEGQWQPLPGRGFDL TGWDEGTRADAVRQRLVFDSLGLASSEAAVRLDRGGQVLVVHVRRDGKVTVDAG
Sequences:
>Translated_134_residues MLVVLLVMGLLATVAVLTMPGDERKLRNEAERFAARTLAARDEAIVGARPVALVVSERGYYFERRMEGQWQPLPGRGFDL TGWDEGTRADAVRQRLVFDSLGLASSEAAVRLDRGGQVLVVHVRRDGKVTVDAG >Mature_134_residues MLVVLLVMGLLATVAVLTMPGDERKLRNEAERFAARTLAARDEAIVGARPVALVVSERGYYFERRMEGQWQPLPGRGFDL TGWDEGTRADAVRQRLVFDSLGLASSEAAVRLDRGGQVLVVHVRRDGKVTVDAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14691; Mature: 14691
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVVLLVMGLLATVAVLTMPGDERKLRNEAERFAARTLAARDEAIVGARPVALVVSERGY CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCC YFERRMEGQWQPLPGRGFDLTGWDEGTRADAVRQRLVFDSLGLASSEAAVRLDRGGQVLV EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE VHVRRDGKVTVDAG EEEECCCEEEEECC >Mature Secondary Structure MLVVLLVMGLLATVAVLTMPGDERKLRNEAERFAARTLAARDEAIVGARPVALVVSERGY CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEEECCCCEEEEEECCCC YFERRMEGQWQPLPGRGFDLTGWDEGTRADAVRQRLVFDSLGLASSEAAVRLDRGGQVLV EEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEECCCCEEEE VHVRRDGKVTVDAG EEEECCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA