| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
Click here to switch to the map view.
The map label for this gene is 87199354
Identifier: 87199354
GI number: 87199354
Start: 1374493
End: 1374774
Strand: Direct
Name: 87199354
Synonym: Saro_1333
Alternate gene names: NA
Gene position: 1374493-1374774 (Clockwise)
Preceding gene: 87199353
Following gene: 87199356
Centisome position: 38.59
GC content: 63.48
Gene sequence:
>282_bases ATGAACAGGTCGCCCGCCCAGCCCGCACAGTCCGCATATGGCTTTGCCTATGGCTCAGCCCGGCATCCTTTCCGCGCCAC GCTGCCGCTGCATGTGCTGCGCGAATTGCCTAGGCATGAACCCGAAGTCGCGGCCGCGATACGCCGCGCCGAGGAACGCC TGAAATCGATCGAGGTCCGATCCGATCCGGTCGATCTCAAGCGCATCACCGCGCGCGACCTGCGCGAGTTCCTGCTGGCC TATTGCGCCTGTTTCTTCGCGGTGATGATGTTCATCGCGTGA
Upstream 100 bases:
>100_bases TTTTCGCATCGATTTGCCGATTGTGTACCGGGTTGGCACGCCAACTTTTTTGAATGCGCGGCGGGATACCGGAAGGTGAA GAAAGCGTTAAACTGAAATC
Downstream 100 bases:
>100_bases CGCCGGACTGCCGCACTTCGCGTTCCGCCTTGTAGAGCAGCCAGCCAAGCCAGGCCGAAACGATGCACATCGCCGCGCCC AGCATGAGCTGGTCGACGAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 93; Mature: 93
Protein sequence:
>93_residues MNRSPAQPAQSAYGFAYGSARHPFRATLPLHVLRELPRHEPEVAAAIRRAEERLKSIEVRSDPVDLKRITARDLREFLLA YCACFFAVMMFIA
Sequences:
>Translated_93_residues MNRSPAQPAQSAYGFAYGSARHPFRATLPLHVLRELPRHEPEVAAAIRRAEERLKSIEVRSDPVDLKRITARDLREFLLA YCACFFAVMMFIA >Mature_93_residues MNRSPAQPAQSAYGFAYGSARHPFRATLPLHVLRELPRHEPEVAAAIRRAEERLKSIEVRSDPVDLKRITARDLREFLLA YCACFFAVMMFIA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10616; Mature: 10616
Theoretical pI: Translated: 9.78; Mature: 9.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRSPAQPAQSAYGFAYGSARHPFRATLPLHVLRELPRHEPEVAAAIRRAEERLKSIEVR CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC SDPVDLKRITARDLREFLLAYCACFFAVMMFIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure MNRSPAQPAQSAYGFAYGSARHPFRATLPLHVLRELPRHEPEVAAAIRRAEERLKSIEVR CCCCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCC SDPVDLKRITARDLREFLLAYCACFFAVMMFIA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA