| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is pgsA [H]
Identifier: 87199356
GI number: 87199356
Start: 1376224
End: 1376817
Strand: Direct
Name: pgsA [H]
Synonym: Saro_1335
Alternate gene names: 87199356
Gene position: 1376224-1376817 (Clockwise)
Preceding gene: 87199354
Following gene: 87199359
Centisome position: 38.64
GC content: 62.96
Gene sequence:
>594_bases ATGCTGACGCTGCCGAACCTTCTCACCCTGTCGCGGATCGTGACCGTTCCCTTGTTGGCAGCACTGCTGTGGTGGCCCGA ATGGCGACTGGGCTATGGCATGGCCTTCGCGGTCTACTGCCTGATGGGGGTTACCGATTACTTCGACGGCTACCTTGCCC GCGCCAAGGGAGCGGTGAGCAAGCTGGGCATCTTTCTTGACCCGATTGCCGACAAGATCATGGTCGCGGCGGTGATTCTG GTGCTGACCGCGCAGGGTGTCCTGCGCGGGCCCTACGTTGGGGACATGCACGTGATCGCGGGGCTGGTGATCCTGCTGCG CGAAATCGCGGTGTCGGGACTGCGCGAGTTTCTCGGCGGCATCCAGGTCTCTGTCCCGGTAAGCCGGCTCGCCAAGTGGA AGACGACGTTCCAGATGGTGTGCCTTGGTGCGCTGATCCTCGGGCAGGCGCTGCCGGAATGGCTCATGACAATCGGCGGC TTCACGGTGAACGTGCCGCATACGGTTGGCCTTTCGACGCTGTGGGGCGCGGCGGTGCTGACCGTGATTACCGGATGGGA TTACCTGAGGGTCGGCCTGAAGCACATGGATTGA
Upstream 100 bases:
>100_bases AGCCCGGTGAAGCACGCGGGCAAGAGGTTTTGCAGTCGGAGCGGTAGGCGGTGAATGTTGCGATTCCGTTTGGCGCAATT GCACGCTATGCCTTCGCTTG
Downstream 100 bases:
>100_bases AGCTTCGGTCCGGTAGCGCGCCGGATCAACCCGCCCGCAGTTCCTGCGCAAGCATCCTGAATTCCTCGGCACGGGGGCTG TTGCGGCGCCAGACCAGTGC
Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 197; Mature: 197
Protein sequence:
>197_residues MLTLPNLLTLSRIVTVPLLAALLWWPEWRLGYGMAFAVYCLMGVTDYFDGYLARAKGAVSKLGIFLDPIADKIMVAAVIL VLTAQGVLRGPYVGDMHVIAGLVILLREIAVSGLREFLGGIQVSVPVSRLAKWKTTFQMVCLGALILGQALPEWLMTIGG FTVNVPHTVGLSTLWGAAVLTVITGWDYLRVGLKHMD
Sequences:
>Translated_197_residues MLTLPNLLTLSRIVTVPLLAALLWWPEWRLGYGMAFAVYCLMGVTDYFDGYLARAKGAVSKLGIFLDPIADKIMVAAVIL VLTAQGVLRGPYVGDMHVIAGLVILLREIAVSGLREFLGGIQVSVPVSRLAKWKTTFQMVCLGALILGQALPEWLMTIGG FTVNVPHTVGLSTLWGAAVLTVITGWDYLRVGLKHMD >Mature_197_residues MLTLPNLLTLSRIVTVPLLAALLWWPEWRLGYGMAFAVYCLMGVTDYFDGYLARAKGAVSKLGIFLDPIADKIMVAAVIL VLTAQGVLRGPYVGDMHVIAGLVILLREIAVSGLREFLGGIQVSVPVSRLAKWKTTFQMVCLGALILGQALPEWLMTIGG FTVNVPHTVGLSTLWGAAVLTVITGWDYLRVGLKHMD
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=147, Percent_Identity=35.3741496598639, Blast_Score=86, Evalue=1e-18, Organism=Saccharomyces cerevisiae, GI6320059, Length=169, Percent_Identity=30.1775147928994, Blast_Score=65, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21396; Mature: 21396
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTLPNLLTLSRIVTVPLLAALLWWPEWRLGYGMAFAVYCLMGVTDYFDGYLARAKGAVS CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLGIFLDPIADKIMVAAVILVLTAQGVLRGPYVGDMHVIAGLVILLREIAVSGLREFLGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC IQVSVPVSRLAKWKTTFQMVCLGALILGQALPEWLMTIGGFTVNVPHTVGLSTLWGAAVL EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHH TVITGWDYLRVGLKHMD HHHHCHHHHHHHHHHCC >Mature Secondary Structure MLTLPNLLTLSRIVTVPLLAALLWWPEWRLGYGMAFAVYCLMGVTDYFDGYLARAKGAVS CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLGIFLDPIADKIMVAAVILVLTAQGVLRGPYVGDMHVIAGLVILLREIAVSGLREFLGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC IQVSVPVSRLAKWKTTFQMVCLGALILGQALPEWLMTIGGFTVNVPHTVGLSTLWGAAVL EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHH TVITGWDYLRVGLKHMD HHHHCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA