Definition Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome.
Accession NC_007794
Length 3,561,584

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The map label for this gene is pgsA [H]

Identifier: 87199356

GI number: 87199356

Start: 1376224

End: 1376817

Strand: Direct

Name: pgsA [H]

Synonym: Saro_1335

Alternate gene names: 87199356

Gene position: 1376224-1376817 (Clockwise)

Preceding gene: 87199354

Following gene: 87199359

Centisome position: 38.64

GC content: 62.96

Gene sequence:

>594_bases
ATGCTGACGCTGCCGAACCTTCTCACCCTGTCGCGGATCGTGACCGTTCCCTTGTTGGCAGCACTGCTGTGGTGGCCCGA
ATGGCGACTGGGCTATGGCATGGCCTTCGCGGTCTACTGCCTGATGGGGGTTACCGATTACTTCGACGGCTACCTTGCCC
GCGCCAAGGGAGCGGTGAGCAAGCTGGGCATCTTTCTTGACCCGATTGCCGACAAGATCATGGTCGCGGCGGTGATTCTG
GTGCTGACCGCGCAGGGTGTCCTGCGCGGGCCCTACGTTGGGGACATGCACGTGATCGCGGGGCTGGTGATCCTGCTGCG
CGAAATCGCGGTGTCGGGACTGCGCGAGTTTCTCGGCGGCATCCAGGTCTCTGTCCCGGTAAGCCGGCTCGCCAAGTGGA
AGACGACGTTCCAGATGGTGTGCCTTGGTGCGCTGATCCTCGGGCAGGCGCTGCCGGAATGGCTCATGACAATCGGCGGC
TTCACGGTGAACGTGCCGCATACGGTTGGCCTTTCGACGCTGTGGGGCGCGGCGGTGCTGACCGTGATTACCGGATGGGA
TTACCTGAGGGTCGGCCTGAAGCACATGGATTGA

Upstream 100 bases:

>100_bases
AGCCCGGTGAAGCACGCGGGCAAGAGGTTTTGCAGTCGGAGCGGTAGGCGGTGAATGTTGCGATTCCGTTTGGCGCAATT
GCACGCTATGCCTTCGCTTG

Downstream 100 bases:

>100_bases
AGCTTCGGTCCGGTAGCGCGCCGGATCAACCCGCCCGCAGTTCCTGCGCAAGCATCCTGAATTCCTCGGCACGGGGGCTG
TTGCGGCGCCAGACCAGTGC

Product: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 197; Mature: 197

Protein sequence:

>197_residues
MLTLPNLLTLSRIVTVPLLAALLWWPEWRLGYGMAFAVYCLMGVTDYFDGYLARAKGAVSKLGIFLDPIADKIMVAAVIL
VLTAQGVLRGPYVGDMHVIAGLVILLREIAVSGLREFLGGIQVSVPVSRLAKWKTTFQMVCLGALILGQALPEWLMTIGG
FTVNVPHTVGLSTLWGAAVLTVITGWDYLRVGLKHMD

Sequences:

>Translated_197_residues
MLTLPNLLTLSRIVTVPLLAALLWWPEWRLGYGMAFAVYCLMGVTDYFDGYLARAKGAVSKLGIFLDPIADKIMVAAVIL
VLTAQGVLRGPYVGDMHVIAGLVILLREIAVSGLREFLGGIQVSVPVSRLAKWKTTFQMVCLGALILGQALPEWLMTIGG
FTVNVPHTVGLSTLWGAAVLTVITGWDYLRVGLKHMD
>Mature_197_residues
MLTLPNLLTLSRIVTVPLLAALLWWPEWRLGYGMAFAVYCLMGVTDYFDGYLARAKGAVSKLGIFLDPIADKIMVAAVIL
VLTAQGVLRGPYVGDMHVIAGLVILLREIAVSGLREFLGGIQVSVPVSRLAKWKTTFQMVCLGALILGQALPEWLMTIGG
FTVNVPHTVGLSTLWGAAVLTVITGWDYLRVGLKHMD

Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]

COG id: COG0558

COG function: function code I; Phosphatidylglycerophosphate synthase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]

Homologues:

Organism=Escherichia coli, GI1788220, Length=147, Percent_Identity=35.3741496598639, Blast_Score=86, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6320059, Length=169, Percent_Identity=30.1775147928994, Blast_Score=65, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000462
- InterPro:   IPR004570 [H]

Pfam domain/function: PF01066 CDP-OH_P_transf [H]

EC number: =2.7.8.5 [H]

Molecular weight: Translated: 21396; Mature: 21396

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTLPNLLTLSRIVTVPLLAALLWWPEWRLGYGMAFAVYCLMGVTDYFDGYLARAKGAVS
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLGIFLDPIADKIMVAAVILVLTAQGVLRGPYVGDMHVIAGLVILLREIAVSGLREFLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
IQVSVPVSRLAKWKTTFQMVCLGALILGQALPEWLMTIGGFTVNVPHTVGLSTLWGAAVL
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHH
TVITGWDYLRVGLKHMD
HHHHCHHHHHHHHHHCC
>Mature Secondary Structure
MLTLPNLLTLSRIVTVPLLAALLWWPEWRLGYGMAFAVYCLMGVTDYFDGYLARAKGAVS
CCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KLGIFLDPIADKIMVAAVILVLTAQGVLRGPYVGDMHVIAGLVILLREIAVSGLREFLGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCC
IQVSVPVSRLAKWKTTFQMVCLGALILGQALPEWLMTIGGFTVNVPHTVGLSTLWGAAVL
EEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHHHHH
TVITGWDYLRVGLKHMD
HHHHCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA