| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199349
Identifier: 87199349
GI number: 87199349
Start: 1371271
End: 1371876
Strand: Direct
Name: 87199349
Synonym: Saro_1328
Alternate gene names: NA
Gene position: 1371271-1371876 (Clockwise)
Preceding gene: 87199348
Following gene: 87199350
Centisome position: 38.5
GC content: 68.32
Gene sequence:
>606_bases ATGATGCGCGCCCCGAATCCGTCCACCTGCCTTTTTGCCCGCCGTCCCGGTCTCTGGCTTGCCGCAACCGCTGTCCTCAC CCTCATGGGCACGCAGGCTTCGGCGCAGTTCGGCGGCTTCAGCATTCCCTCGATCCCGCGCAGCTCGACCAGCACCGCCA AGGACACGAACGGCTGTCCCAAGGGCAAGAGCAAGAGCGCGGGCTCCTCGATCCTCGGCGGGATAATCGGCCAGGGCGTG GGACGGGCGGCAAGTTCGGCGGGCGTTTCCAGCTACTTCCCCTCGGCGGAAGTCGCCGACACGCTGACCAACGTCATCGC CTGCAAGCTCGACCCGGAGGAGCAGAAGCAGGCCGCCGCCGCGACGCTGGAGGCGACGCGCGGCGATGACGTCGGCAGCA GCGCGTCGTGGACGTCCAACACGCGCGAGAACGTCTCGGGCACCTCGACCGTCACCGCCCGCAACGATGAAGTCGCCGCC AACGGGGGCAGGGGGATGCAGTGCATCACGGTGACCGACGTCATCATCGTCAATGGCGAGGAAACGACCGCCAACAAGCG CATGTGCCGCGCACCGGGTTCGGCGCGCTACGCCCTGGCGGCCTGA
Upstream 100 bases:
>100_bases ACCACTCGGCCCGTCGCGCCACGATTGACGAAGATCACAGGGTTGGTAGCCTTCCGTGCGTTAAGGGCCGCACCAACAAC TCGAAATTCCTGGGATACTG
Downstream 100 bases:
>100_bases TGCGGGCGATCCTGCCGATCCTCGCGCTGCTTCTGGCCACCGGGGCGACGAAGCCGGTGCCGATGGACCCGCGCAATCCC TCGTGCCCCGAGAAGGTCGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 201
Protein sequence:
>201_residues MMRAPNPSTCLFARRPGLWLAATAVLTLMGTQASAQFGGFSIPSIPRSSTSTAKDTNGCPKGKSKSAGSSILGGIIGQGV GRAASSAGVSSYFPSAEVADTLTNVIACKLDPEEQKQAAAATLEATRGDDVGSSASWTSNTRENVSGTSTVTARNDEVAA NGGRGMQCITVTDVIIVNGEETTANKRMCRAPGSARYALAA
Sequences:
>Translated_201_residues MMRAPNPSTCLFARRPGLWLAATAVLTLMGTQASAQFGGFSIPSIPRSSTSTAKDTNGCPKGKSKSAGSSILGGIIGQGV GRAASSAGVSSYFPSAEVADTLTNVIACKLDPEEQKQAAAATLEATRGDDVGSSASWTSNTRENVSGTSTVTARNDEVAA NGGRGMQCITVTDVIIVNGEETTANKRMCRAPGSARYALAA >Mature_201_residues MMRAPNPSTCLFARRPGLWLAATAVLTLMGTQASAQFGGFSIPSIPRSSTSTAKDTNGCPKGKSKSAGSSILGGIIGQGV GRAASSAGVSSYFPSAEVADTLTNVIACKLDPEEQKQAAAATLEATRGDDVGSSASWTSNTRENVSGTSTVTARNDEVAA NGGRGMQCITVTDVIIVNGEETTANKRMCRAPGSARYALAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20452; Mature: 20452
Theoretical pI: Translated: 8.77; Mature: 8.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMRAPNPSTCLFARRPGLWLAATAVLTLMGTQASAQFGGFSIPSIPRSSTSTAKDTNGCP CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KGKSKSAGSSILGGIIGQGVGRAASSAGVSSYFPSAEVADTLTNVIACKLDPEEQKQAAA CCCCCCCCHHHHHHHHHHCCCHHHHHCCCHHCCCCHHHHHHHHHHEEEECCCHHHHHHHH ATLEATRGDDVGSSASWTSNTRENVSGTSTVTARNDEVAANGGRGMQCITVTDVIIVNGE HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCEEEEEEEEEEEECCC ETTANKRMCRAPGSARYALAA CCCCCCHHHCCCCCCEEEECC >Mature Secondary Structure MMRAPNPSTCLFARRPGLWLAATAVLTLMGTQASAQFGGFSIPSIPRSSTSTAKDTNGCP CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KGKSKSAGSSILGGIIGQGVGRAASSAGVSSYFPSAEVADTLTNVIACKLDPEEQKQAAA CCCCCCCCHHHHHHHHHHCCCHHHHHCCCHHCCCCHHHHHHHHHHEEEECCCHHHHHHHH ATLEATRGDDVGSSASWTSNTRENVSGTSTVTARNDEVAANGGRGMQCITVTDVIIVNGE HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEECCCCCCEEEEEEEEEEEECCC ETTANKRMCRAPGSARYALAA CCCCCCHHHCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA