| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199348
Identifier: 87199348
GI number: 87199348
Start: 1370546
End: 1370863
Strand: Direct
Name: 87199348
Synonym: Saro_1327
Alternate gene names: NA
Gene position: 1370546-1370863 (Clockwise)
Preceding gene: 87199340
Following gene: 87199349
Centisome position: 38.48
GC content: 61.01
Gene sequence:
>318_bases ATGGTCAAGCCGGAATGGGGCGCCAAGCATAGCTGTCCGAAGTGCGGCACCCGCTTCTACGATCTGGGCAATTCCGACCC GGTCACCTGCGTCGAGTGCAAGTACTCCTGGCATCCGGACCCGGTGCTCAAGTCGAAGCAGCCGATTCCCTATGAGGAAA TCCAGAAGGACAAGGTCGATGTCGCTCCCGACGTCGATCTCGCCGATGAGGATCTCGACATCGACGAGGACGGCGATTCG CCCGACAACGACGTCGATCTTGGCGGCGACGACGACCTTGGCGTTGCCGGTCACGACGGCGACGAAGACGAAGTCTGA
Upstream 100 bases:
>100_bases GCGCGCGCTCTCTTGATTCCGCGAACGCGCGGACCCATCAAGCGTGCAGTTTCTCCGCCCGGCCATTTCCTTTGCGCCGG GCCAGACTTGAGGAAGTTTC
Downstream 100 bases:
>100_bases TGCGCTTGTGGAGCCGGTTTCCGGACCGGCTCCAAAAAAATTCCGGGAGGCGGAATTTTCGTCTTGCCAGTCCGGAAACC TTCCCTTAGAGGCGCGGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 105; Mature: 105
Protein sequence:
>105_residues MVKPEWGAKHSCPKCGTRFYDLGNSDPVTCVECKYSWHPDPVLKSKQPIPYEEIQKDKVDVAPDVDLADEDLDIDEDGDS PDNDVDLGGDDDLGVAGHDGDEDEV
Sequences:
>Translated_105_residues MVKPEWGAKHSCPKCGTRFYDLGNSDPVTCVECKYSWHPDPVLKSKQPIPYEEIQKDKVDVAPDVDLADEDLDIDEDGDS PDNDVDLGGDDDLGVAGHDGDEDEV >Mature_105_residues MVKPEWGAKHSCPKCGTRFYDLGNSDPVTCVECKYSWHPDPVLKSKQPIPYEEIQKDKVDVAPDVDLADEDLDIDEDGDS PDNDVDLGGDDDLGVAGHDGDEDEV
Specific function: Unknown
COG id: COG4530
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11532; Mature: 11532
Theoretical pI: Translated: 3.80; Mature: 3.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 3.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKPEWGAKHSCPKCGTRFYDLGNSDPVTCVECKYSWHPDPVLKSKQPIPYEEIQKDKVD CCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCC VAPDVDLADEDLDIDEDGDSPDNDVDLGGDDDLGVAGHDGDEDEV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVKPEWGAKHSCPKCGTRFYDLGNSDPVTCVECKYSWHPDPVLKSKQPIPYEEIQKDKVD CCCCCCCCCCCCCCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHCCCCCC VAPDVDLADEDLDIDEDGDSPDNDVDLGGDDDLGVAGHDGDEDEV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA