| Definition | Novosphingobium aromaticivorans DSM 12444 chromosome, complete genome. |
|---|---|
| Accession | NC_007794 |
| Length | 3,561,584 |
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The map label for this gene is 87199262
Identifier: 87199262
GI number: 87199262
Start: 1290802
End: 1291248
Strand: Direct
Name: 87199262
Synonym: Saro_1240
Alternate gene names: NA
Gene position: 1290802-1291248 (Clockwise)
Preceding gene: 87199261
Following gene: 87199263
Centisome position: 36.24
GC content: 63.09
Gene sequence:
>447_bases ATGTTCCTGATCTGGCTGCTCAGGCTGTCGATCCTGGCCGTTCTGGCCTTCGCCGCACGCAAGGGTGGGGAGCCGGAGCG CCTTGTGGCGCTTGTCCTCATTTCGACCAGCGTCCTGGATGTGTTCAATCACTCGATGTTCGGACAGCCGGCGTTCTTTG CGCTCGATCCGGGACATGTGGTGATCGACACTTGGGCGATGATCGCCCTGCTGTGGGTCGCGCTCCAGGCCAACAGGGGC TGGCCGATCTGGGCCTGCGCCGCGCAGATCATCGTCGTGCTCGGGCATGTTGCCAAGATCATCGACCTGTCACTGGTGCG CTACGGCTACTTCGCCATGACGCAGATGCCCATGTCGATCCAGGCCGTGGCCATCTTCGGCGGAACGCTGGCGCATGTGC GGCGGGAGGAGCGAATTGGCCGCTATCACGCGTGGCGCTTTGCATGA
Upstream 100 bases:
>100_bases AAGGGCGCCACCGGGTCTGCCGAACTGCCTGCGGGCGTTCCTGCCGTGCTCCGGGTCGCCTGACGGGAATGCCCGCCCTG CCTGCAACGGGTGACACGTC
Downstream 100 bases:
>100_bases TCCGTCCTGCCTCCTCCAGCCGGCACCGTTCCATCCAGTTTGTTACCGGGAGCAGATCACAATGACCGTTCGTTCCATGC GTGCCACGCTCGCCAGTGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MFLIWLLRLSILAVLAFAARKGGEPERLVALVLISTSVLDVFNHSMFGQPAFFALDPGHVVIDTWAMIALLWVALQANRG WPIWACAAQIIVVLGHVAKIIDLSLVRYGYFAMTQMPMSIQAVAIFGGTLAHVRREERIGRYHAWRFA
Sequences:
>Translated_148_residues MFLIWLLRLSILAVLAFAARKGGEPERLVALVLISTSVLDVFNHSMFGQPAFFALDPGHVVIDTWAMIALLWVALQANRG WPIWACAAQIIVVLGHVAKIIDLSLVRYGYFAMTQMPMSIQAVAIFGGTLAHVRREERIGRYHAWRFA >Mature_148_residues MFLIWLLRLSILAVLAFAARKGGEPERLVALVLISTSVLDVFNHSMFGQPAFFALDPGHVVIDTWAMIALLWVALQANRG WPIWACAAQIIVVLGHVAKIIDLSLVRYGYFAMTQMPMSIQAVAIFGGTLAHVRREERIGRYHAWRFA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16561; Mature: 16561
Theoretical pI: Translated: 10.17; Mature: 10.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFLIWLLRLSILAVLAFAARKGGEPERLVALVLISTSVLDVFNHSMFGQPAFFALDPGHV CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE VIDTWAMIALLWVALQANRGWPIWACAAQIIVVLGHVAKIIDLSLVRYGYFAMTQMPMSI EHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QAVAIFGGTLAHVRREERIGRYHAWRFA HHHHHHHHHHHHHHHHHHHCHHHHCCCC >Mature Secondary Structure MFLIWLLRLSILAVLAFAARKGGEPERLVALVLISTSVLDVFNHSMFGQPAFFALDPGHV CHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCE VIDTWAMIALLWVALQANRGWPIWACAAQIIVVLGHVAKIIDLSLVRYGYFAMTQMPMSI EHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QAVAIFGGTLAHVRREERIGRYHAWRFA HHHHHHHHHHHHHHHHHHHCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA